GTF2H3

General Information

Gene Name       : GTF2H3
Gene ID             : ENSG00000111358.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: GTF2H3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GTF2H3ENSG00000111358.1349.7642.8446.30ENCSR000AEF
HepG2GTF2H3ENSG00000111358.1323.1647.9835.57ENCSR985KAT
K562GTF2H3ENSG00000111358.1359.2655.2357.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GTF2H3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GTF2H3 RNA is bound by 14 proteins.  







eCLIP assay for GTF2H3 is not avaliable on ENCORE database.





14 proteins are bound to GTF2H3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12124144609124144676+3'-UTR,CDS,intron-Proximal3.166144.48980K562PRPF8
chr12124147061124147126+3'-UTR4.435063.32080HepG2FUBP3
chr12124146384124146491+3'-UTR5.2840732.32188K562UPF1
chr12124144719124144769+3'-UTR,CDS3.304663.80905K562UPF1
chr12124139468124139562+3'-UTR,CDS,intron-Distal,intron-Proximal4.611843.45943HepG2BCLAF1
chr12124144128124144192+3'-UTR,CDS,intron-Distal,intron-Proximal3.784594.00320K562AQR
chr12124146320124146384+3'-UTR5.2502032.67532K562UPF1
chr12124146301124146320+3'-UTR4.2504715.01187K562UPF1
chr12124144111124144173+3'-UTR,CDS,intron-Distal,intron-Proximal4.541818.44604HepG2PRPF8
chr12124144598124144692+3'-UTR,CDS,intron-Proximal4.176586.37709K562EFTUD2
chr12124146291124146381+3'-UTR3.260839.70825K562AKAP1
chr12124145698124145738+3'-UTR3.414716.98582K562UPF1
chr12124146297124146412+3'-UTR4.0396910.90685HepG2UPF1
chr12124146381124146474+3'-UTR3.7991112.27886K562AKAP1
chr12124130003124130100+5'-UTR,CDS4.359824.34038HepG2BCLAF1
chr12124123810124123879+5'-UTR,CDS,intron-Distal,intron-Proximal4.424635.07098K562DDX3X
chr12124144001124144058+CDS,intron-Proximal4.842205.50328HepG2RBM5
chr12124138853124138993+intron-Distal5.025055.29571HepG2FUBP3
chr12124141748124141783+intron-Distal4.683676.13169K562ILF3
chr12124141728124141748+intron-Distal4.314784.83729K562ILF3
chr12124141026124141103+intron-Distal3.151453.27276HepG2HNRNPL
chr12124141895124141949+intron-Distal4.373054.43431HepG2RBFOX2
chr12124138690124138758+intron-Distal3.435063.12167HepG2FUBP3
chr12124142015124142092+intron-Distal4.6565711.41948HepG2RBFOX2
chr12124138629124138714+intron-Distal5.123069.81960K562TARDBP
chr12124138813124138945+intron-Distal4.542236.09994K562KHSRP
chr12124139143124139282+intron-Distal3.906764.13343HepG2FUBP3
chr12124139146124139298+intron-Distal3.593915.98773K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GTF2H3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GTF2H3 is not available on ENCORE database.

  • 93 RBPs can affect the levels of GTF2H3.  








The Knockdown/knockout RNA-Seq assay for GTF2H3 is not available on ENCORE database.





93 RBPs can affect the gene expression of GTF2H3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GTF2H3ENSG00000111358.9616.26810744.90020-0.273502.095501.41500HepG2AKAP8L
GTF2H3ENSG00000111358.9939.833801456.98250-0.6325012.8444011.55990HepG2AUH
GTF2H3ENSG00000111358.9484.67730664.54030-0.455302.457601.61160HepG2BCLAF1
GTF2H3ENSG00000111358.9516.21020742.59400-0.524602.218001.35370HepG2CCAR1
GTF2H3ENSG00000111358.9756.56020992.96830-0.392302.562101.81530HepG2CIRBP
GTF2H3ENSG00000111358.9563.79330741.25590-0.394804.233803.44440HepG2CKAP4
GTF2H3ENSG00000111358.9289.03080507.59180-0.812406.579605.55140HepG2CPSF6
GTF2H3ENSG00000111358.9439.56600685.70390-0.641509.588208.21560HepG2DDX19B
GTF2H3ENSG00000111358.9829.35250626.938700.403603.123002.15140HepG2DDX24
GTF2H3ENSG00000111358.9805.584201210.05480-0.587005.148404.31880HepG2DDX3X
GTF2H3ENSG00000111358.9498.354501039.28430-1.0603012.3552011.16140HepG2DDX6
GTF2H3ENSG00000111358.9503.13160999.26570-0.9899012.0793010.89530HepG2EIF2S1
GTF2H3ENSG00000111358.9647.146901104.39150-0.771107.332706.29250HepG2EIF4A3
GTF2H3ENSG00000111358.9720.164701075.11710-0.578103.640702.85710HepG2EIF4B
GTF2H3ENSG00000111358.9843.917801153.57380-0.450906.177605.01640HepG2EIF4G1
GTF2H3ENSG00000111358.92002.493001672.801100.259403.133802.50050HepG2ETF1
GTF2H3ENSG00000111358.9785.899601033.55870-0.395202.458001.82880HepG2G3BP1
GTF2H3ENSG00000111358.9464.43180603.41760-0.377702.337101.73850HepG2HNRNPA1
GTF2H3ENSG00000111358.9310.72480671.18270-1.1111013.8377012.40200HepG2HNRNPC
GTF2H3ENSG00000111358.9559.04370712.60080-0.350103.129802.37070HepG2HNRNPF
GTF2H3ENSG00000111358.9828.461801065.16830-0.362604.793503.92380HepG2HNRNPL
GTF2H3ENSG00000111358.9389.01660666.74590-0.7773011.4284010.26770HepG2HNRNPU
GTF2H3ENSG00000111358.9672.931201050.63820-0.642705.972505.01700HepG2IGF2BP2
GTF2H3ENSG00000111358.9442.82870681.06010-0.621008.831907.59380HepG2ILF2
GTF2H3ENSG00000111358.9537.64220783.61920-0.543502.695601.87680HepG2LARP4
GTF2H3ENSG00000111358.9567.901601147.12610-1.0143012.8479011.54020HepG2NCBP2
GTF2H3ENSG00000111358.9687.16690964.96000-0.489805.970205.22900HepG2PTBP1
GTF2H3ENSG00000111358.9647.495401106.82560-0.7735010.668609.60010HepG2PUF60
GTF2H3ENSG00000111358.9918.015501174.93320-0.356005.029104.27790HepG2PUM1
GTF2H3ENSG00000111358.9469.64850755.18010-0.6852010.458509.39290HepG2PUS1
GTF2H3ENSG00000111358.9857.198001044.99840-0.285802.173701.60850HepG2QKI
GTF2H3ENSG00000111358.9251.52560674.20450-1.4225011.5507010.18530HepG2RAVER1
GTF2H3ENSG00000111358.9638.854001398.15420-1.1300029.3570028.02680HepG2RBM22
GTF2H3ENSG00000111358.9633.20580948.43230-0.582906.186505.21510HepG2RBM25
GTF2H3ENSG00000111358.9581.11340767.67860-0.401702.929602.22940HepG2RPLP0
GTF2H3ENSG00000111358.9430.49060623.68240-0.534802.248401.63960HepG2SF3A3
GTF2H3ENSG00000111358.9394.93480543.51680-0.460702.747002.04260HepG2SF3B1
GTF2H3ENSG00000111358.9770.578301004.58300-0.382604.019903.32880HepG2SF3B4
GTF2H3ENSG00000111358.91149.126101579.16730-0.458607.930807.20320HepG2SRFBP1
GTF2H3ENSG00000111358.91616.997001048.593700.6248013.2377012.36940HepG2SRSF1
GTF2H3ENSG00000111358.9880.152901371.09740-0.6395012.9368011.98900HepG2SSB
GTF2H3ENSG00000111358.91188.71030942.590300.334603.313502.70850HepG2TAF15
GTF2H3ENSG00000111358.9457.24220647.89730-0.502804.434903.83270HepG2TIAL1
GTF2H3ENSG00000111358.9444.96960653.65780-0.554806.552105.74940HepG2TRIM56
GTF2H3ENSG00000111358.9255.18700523.27560-1.036002.891401.88040HepG2U2AF2
GTF2H3ENSG00000111358.9869.157401144.53120-0.397102.560101.75510HepG2UBE2L3
GTF2H3ENSG00000111358.9195.32400442.19480-1.1788011.518709.99020HepG2UCHL5
GTF2H3ENSG00000111358.9866.255501282.53440-0.566107.341906.48220K562AGGF1
GTF2H3ENSG00000111358.9744.309101334.50620-0.8423013.0359011.46390K562AKAP8L
GTF2H3ENSG00000111358.91231.440702017.80290-0.712409.925608.91870K562AQR
GTF2H3ENSG00000111358.9942.538701283.12270-0.445006.551505.04780K562BCLAF1
GTF2H3ENSG00000111358.9527.07860763.59210-0.534804.030302.97500K562BOP1
GTF2H3ENSG00000111358.9233.89460489.50570-1.065508.646606.49590K562CCAR1
GTF2H3ENSG00000111358.91224.710101670.77360-0.448104.429402.79970K562CIRBP
GTF2H3ENSG00000111358.9929.084201330.97390-0.518602.948301.45310K562CKAP4
GTF2H3ENSG00000111358.9489.85760811.91770-0.729008.796707.38230K562CPSF6
GTF2H3ENSG00000111358.9795.084101504.76160-0.9204014.3883011.40230K562DDX19B
GTF2H3ENSG00000111358.9838.742501025.49980-0.290002.539201.38160K562DDX21
GTF2H3ENSG00000111358.9559.00030909.96450-0.703008.921106.94000K562DDX3X
GTF2H3ENSG00000111358.91119.537001367.90980-0.289102.973902.29970K562DDX47
GTF2H3ENSG00000111358.9761.12250970.70360-0.350902.169901.36180K562EFTUD2
GTF2H3ENSG00000111358.9996.563101308.17230-0.392502.835002.10850K562EIF2S2
GTF2H3ENSG00000111358.9767.092801039.50580-0.438402.439701.47480K562EIF3D
GTF2H3ENSG00000111358.9634.28150856.09740-0.432704.551903.00660K562EIF4B
GTF2H3ENSG00000111358.9754.47750999.07720-0.405103.180202.26870K562FIP1L1
GTF2H3ENSG00000111358.9530.84990771.62490-0.539603.946202.57180K562FKBP4
GTF2H3ENSG00000111358.9503.83510826.10670-0.713407.219905.80450K562FMR1
GTF2H3ENSG00000111358.9444.65120700.19980-0.655105.407504.08320K562FTO
GTF2H3ENSG00000111358.91192.41620988.643900.270302.367901.79990K562FXR1
GTF2H3ENSG00000111358.91430.289001036.688400.464203.044802.29710K562G3BP2
GTF2H3ENSG00000111358.9437.79010775.18180-0.824309.568808.07880K562GPKOW
GTF2H3ENSG00000111358.91200.870701743.43120-0.537803.611202.75190K562GRSF1
GTF2H3ENSG00000111358.9579.012201045.95760-0.853204.476502.80960K562HNRNPA2B1
GTF2H3ENSG00000111358.9367.30370889.11190-1.2754022.2379020.62460K562HNRNPC
GTF2H3ENSG00000111358.91099.570701535.49260-0.481806.949105.52930K562HNRNPU
GTF2H3ENSG00000111358.91019.952701558.76560-0.611905.409203.77170K562IGF2BP2
GTF2H3ENSG00000111358.9342.88590494.32830-0.527703.125601.54310K562KHDRBS1
GTF2H3ENSG00000111358.91055.436601416.34610-0.424304.392903.32210K562KIF1C
GTF2H3ENSG00000111358.9422.62500661.90820-0.647304.074802.92260K562KRR1
GTF2H3ENSG00000111358.91010.702401355.70940-0.423703.923802.57010K562MAK16
GTF2H3ENSG00000111358.9567.16160756.66380-0.415903.136602.20040K562METAP2
GTF2H3ENSG00000111358.91769.877002334.79210-0.399603.501702.23150K562MSI2
GTF2H3ENSG00000111358.9834.245201035.37840-0.311603.196802.32780K562MTPAP
GTF2H3ENSG00000111358.9847.795501150.42030-0.440407.110105.99420K562NSUN2
GTF2H3ENSG00000111358.9592.43960914.95630-0.627002.617901.66200K562PABPN1
GTF2H3ENSG00000111358.91095.207801457.74270-0.412503.872002.71060K562PCBP2
GTF2H3ENSG00000111358.9623.11780868.14430-0.478403.352802.43770K562PCBP3
GTF2H3ENSG00000111358.9522.90240665.90620-0.348802.225501.50670K562POLR2G
GTF2H3ENSG00000111358.9610.23820797.15930-0.385502.594001.72510K562PSIP1
GTF2H3ENSG00000111358.9951.024101591.74000-0.7431012.8210011.44730K562PTBP1
GTF2H3ENSG00000111358.91532.539802389.93030-0.641008.402406.97340K562PUF60
GTF2H3ENSG00000111358.91968.423402490.72780-0.339504.351403.14130K562PUM2
GTF2H3ENSG00000111358.9518.851801323.67110-1.3512023.2977021.74110K562PUS1
GTF2H3ENSG00000111358.9782.442801289.54640-0.7208012.5283011.27070K562RBM15
GTF2H3ENSG00000111358.91119.894401526.36450-0.446704.348603.26460K562RBM22
GTF2H3ENSG00000111358.9578.55100984.58890-0.767103.401601.91280K562RBM25
GTF2H3ENSG00000111358.91144.005901487.85610-0.379102.954001.50920K562RBM34
GTF2H3ENSG00000111358.91002.861401313.29290-0.389104.179402.24090K562RPS10
GTF2H3ENSG00000111358.9719.648901135.13860-0.6575011.063509.51260K562SF3A3
GTF2H3ENSG00000111358.9415.58440737.22480-0.827007.473905.82510K562SF3B1
GTF2H3ENSG00000111358.9746.667101079.19000-0.531402.094201.35100K562SF3B4
GTF2H3ENSG00000111358.9535.52410689.37320-0.364302.291601.37680K562SRFBP1
GTF2H3ENSG00000111358.91091.940401473.66070-0.432504.051202.73860K562SRSF5
GTF2H3ENSG00000111358.9734.89370915.15270-0.316502.832201.64750K562SRSF7
GTF2H3ENSG00000111358.9695.230801149.46790-0.725403.184801.62110K562SUPT6H
GTF2H3ENSG00000111358.9966.14970667.907500.532504.581503.51750K562SYNCRIP
GTF2H3ENSG00000111358.91165.191201579.28070-0.438703.894103.04840K562TARDBP
GTF2H3ENSG00000111358.9608.80480814.44800-0.419802.965001.97920K562TRIM56
GTF2H3ENSG00000111358.92069.986102694.45820-0.380403.859302.18980K562UBE2L3
GTF2H3ENSG00000111358.9549.82160968.09660-0.816207.756605.98260K562UCHL5
GTF2H3ENSG00000111358.9979.551301219.81330-0.316503.637302.82200K562UPF1
GTF2H3ENSG00000111358.9820.422401341.85500-0.709803.873202.25360K562UTP18
GTF2H3ENSG00000111358.9850.220401154.48840-0.441302.921901.68280K562UTP3
GTF2H3ENSG00000111358.9772.496701043.75850-0.434204.070403.00160K562WDR3
GTF2H3ENSG00000111358.9756.605201085.36830-0.520608.505607.10130K562WDR43
GTF2H3ENSG00000111358.91896.941402390.80500-0.333803.355101.92380K562WRN
GTF2H3ENSG00000111358.91671.122802273.08240-0.443804.929803.72440K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GTF2H3 is not available on ENCORE database.





14 RBPs can affect the splicing of GTF2H3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGTF2H3ENSG00000111358.9chr12+124132509124132673124130001124130108124135540124135603-0.121000.000000.00013excludedK562SF3B4
SEGTF2H3ENSG00000111358.9chr12+124139470124139545124137253124137282124144062124144218-0.217000.001550.04434excludedK562AKAP8L
SEGTF2H3ENSG00000111358.9chr12+124132509124132673124130001124130108124135540124135603-0.094000.000240.02730excludedK562XRCC6
SEGTF2H3ENSG00000111358.9chr12+124139470124139545124137253124137282124143976124144218-0.471000.000000.00000excludedK562AQR
SEGTF2H3ENSG00000111358.9chr12+124123810124123890124118391124118419124130001124130108-0.192000.000030.00067excludedK562AQR
SEGTF2H3ENSG00000111358.9chr12+124132509124132673124130001124130108124135540124135603-0.249000.000000.00000excludedK562AQR
SEGTF2H3ENSG00000111358.9chr12+124123810124123890124118391124118419124130001124130108-0.143000.006490.07575excludedK562PUS1
SEGTF2H3ENSG00000111358.9chr12+124132509124132673124130001124130108124135540124135603-0.119000.000000.00015excludedK562U2AF1
SEGTF2H3ENSG00000111358.9chr12+124123810124123890124118391124118419124130001124130108-0.172000.004000.06875excludedK562U2AF1
SEGTF2H3ENSG00000111358.9chr12+124140317124140371124139470124139545124144062124144131-0.172000.001430.02993excludedK562U2AF1
SEGTF2H3ENSG00000111358.9chr12+124123810124123890124118391124118419124130001124130108-0.340000.000000.00000excludedK562U2AF2
SEGTF2H3ENSG00000111358.9chr12+124139470124139545124137253124137282124144062124144218-0.195000.005470.09778excludedK562RBM15
SEGTF2H3ENSG00000111358.9chr12+124139470124139545124137253124137282124144062124144218-0.224000.002470.05524excludedK562AGGF1
SEGTF2H3ENSG00000111358.9chr12+124123810124123890124118391124118419124130001124130108-0.155000.001070.02928excludedK562AGGF1
SEGTF2H3ENSG00000111358.9chr12+1241238101241238901241183911241184191241300011241301080.127000.000410.02001includedK562PTBP1
SEGTF2H3ENSG00000111358.9chr12+124139470124139545124137253124137282124144062124144131-0.185000.000010.00581excludedK562NPM1
A3SSGTF2H3ENSG00000111358.9chr12+1241439761241442181241440621241442181241403171241403710.391000.000070.00648longerK562SF3B4
A3SSGTF2H3ENSG00000111358.9chr12+1241370701241371081241370781241371081241354741241356030.101000.003150.01925longerK562AQR
A3SSGTF2H3ENSG00000111358.9chr12+1241439761241442181241440621241442181241401441241403710.282000.000180.00148longerK562AQR
A5SSGTF2H3ENSG00000111358.9chr12+1241440621241442181241440621241441311241443411241444770.127000.000030.00081longerK562AQR
A5SSGTF2H3ENSG00000111358.9chr12+1241394701241396251241394701241395451241403171241403710.098000.000010.00026longerK562AQR
RIGTF2H3ENSG00000111358.9chr12+124143950124144131124143950124144022124144122124144131-0.145000.001920.02106excludedHepG2RBM22
RIGTF2H3ENSG00000111358.9chr12+1241445571241447591241445571241446291241447121241447590.087000.000000.00000includedK562AQR
MXEGTF2H3ENSG00000111358.9chr12+1241439761241440221241440621241441311241403171241403711241443411241444770.111000.000230.006581includedHepG2U2AF1
MXEGTF2H3ENSG00000111358.9chr12+124139470124139545124140317124140371124137253124137282124144062124144131-0.241000.002700.036492includedK562DROSHA
MXEGTF2H3ENSG00000111358.9chr12+1241439501241440221241440621241442181241403171241403711241443411241444770.286000.004690.033971includedK562AQR
MXEGTF2H3ENSG00000111358.9chr12+1241439501241440221241440621241441311241403171241403711241443411241444770.083000.015010.087661includedK562AQR
MXEGTF2H3ENSG00000111358.9chr12+1241439501241440221241440621241441311241372531241372821241443411241444770.105000.002730.021641includedK562AQR
MXEGTF2H3ENSG00000111358.9chr12+1241439761241440221241440221241441311241403171241403711241443411241444770.093000.014730.086401includedK562AQR
MXEGTF2H3ENSG00000111358.9chr12+1241439761241440221241440621241442181241403171241403711241443411241444770.294000.008990.058071includedK562AQR
MXEGTF2H3ENSG00000111358.9chr12+1241439761241440221241440621241441311241403171241403711241443411241444770.100000.004990.035851includedK562AQR
MXEGTF2H3ENSG00000111358.9chr12+1241439761241440221241440621241441311241372531241372821241443411241444770.142000.000790.007431includedK562AQR
MXEGTF2H3ENSG00000111358.9chr12+1241300011241301081241325091241326731241238101241238901241355401241356030.180000.000470.004691includedK562AQR
MXEGTF2H3ENSG00000111358.9chr12+1241300011241301081241325091241326731241238101241238901241355401241356030.202000.000090.009391includedK562LARP7
MXEGTF2H3ENSG00000111358.9chr12+1241439761241440221241440621241441311241403171241403711241443411241444770.102000.001420.082021includedK562RBM22
MXEGTF2H3ENSG00000111358.9chr12+1241439501241440221241440621241441311241372531241372821241443411241444770.155000.000450.010271includedK562SF3B4
MXEGTF2H3ENSG00000111358.9chr12+1241394701241395451241403171241403711241372531241372821241440621241441310.367000.003110.045371includedK562SF3B4
MXEGTF2H3ENSG00000111358.9chr12+1241439761241440221241440621241441311241372531241372821241443411241444770.218000.000040.001281includedK562SF3B4
MXEGTF2H3ENSG00000111358.9chr12+1241439761241440221241440621241441311241403171241403711241443411241444770.223000.000000.000021includedK562SF3B4
MXEGTF2H3ENSG00000111358.9chr12+1241439761241440221241440621241442181241403171241403711241443411241444770.678000.000000.000011includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GTF2H3 is not avaliable on ENCORE database.