GALNT11

General Information

Gene Name       : GALNT11
Gene ID             : ENSG00000178234.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GALNT11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GALNT11ENSG00000178234.1210.456.478.46ENCSR000AEF
HepG2GALNT11ENSG00000178234.1213.4714.0713.77ENCSR985KAT
K562GALNT11ENSG00000178234.1222.7130.1126.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GALNT11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GALNT11 RNA is bound by 15 proteins.  







eCLIP assay for GALNT11 is not avaliable on ENCORE database.





15 proteins are bound to GALNT11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7151810343151810424+3'-UTR,CDS3.790953.25175K562YBX3
chr7151819274151819342+3'-UTR4.043435.08528K562DDX6
chr7151819073151819118+3'-UTR4.804957.87748K562PUM2
chr7151722802151722931+5'-UTR,CDS6.4804813.45742HepG2DDX3X
chr7151722845151722944+5'-UTR,CDS4.132157.37356K562DDX3X
chr7151791472151791519+CDS,intron-Distal3.201374.29172K562YBX3
chr7151748186151748238+intron-Distal4.097303.01445K562EXOSC5
chr7151747655151747717+intron-Distal3.315233.83677K562HNRNPM
chr7151745877151745953+intron-Distal3.896753.33944K562MATR3
chr7151742898151742965+intron-Distal3.805418.78073K562EXOSC5
chr7151734719151734777+intron-Distal4.014993.30696K562EXOSC5
chr7151727715151727971+intron-Distal4.6021116.55218K562MATR3
chr7151756086151756156+intron-Distal3.313803.90146K562KHSRP
chr7151743284151743300+intron-Distal5.6026611.33028K562HNRNPM
chr7151734181151734229+intron-Distal3.503334.56666K562HNRNPM
chr7151759802151759856+intron-Distal4.507025.12432K562EXOSC5
chr7151749955151750014+intron-Distal4.823605.90588K562MATR3
chr7151776750151776835+intron-Distal4.027656.19377K562KHSRP
chr7151776835151776895+intron-Distal4.4164610.06297K562KHSRP
chr7151743277151743304+intron-Distal3.885064.61282K562EXOSC5
chr7151766436151766527+intron-Distal4.389794.80466K562EXOSC5
chr7151727836151727962+intron-Distal5.4087839.81014K562PTBP1
chr7151759314151759381+intron-Distal4.542215.12361K562EXOSC5
chr7151723026151723198+intron-Distal,intron-Proximal4.749287.05950K562XRN2
chr7151742748151742782+intron-Distal3.956073.45817K562MATR3
chr7151743570151743626+intron-Distal4.034545.50856K562EXOSC5
chr7151749856151749905+intron-Distal3.522884.97279K562MATR3
chr7151761266151761328+intron-Distal4.433243.30687K562EXOSC5
chr7151766496151766626+intron-Distal4.396753.72005K562MATR3
chr7151747493151747571+intron-Distal5.343348.23608HepG2HNRNPM
chr7151749625151749704+intron-Distal5.197769.11520K562MATR3
chr7151747492151747593+intron-Distal6.8589633.40562K562HNRNPM
chr7151749738151749788+intron-Distal3.635803.27944K562PTBP1
chr7151769789151769900+intron-Distal6.4403921.27708K562CPSF6
chr7151776895151776999+intron-Distal3.264037.36118K562KHSRP
chr7151769916151769993+intron-Distal5.6924113.23965K562CPSF6
chr7151749641151749697+intron-Distal3.874825.16181K562PTBP1
chr7151742893151742974+intron-Distal4.7978412.74513K562MATR3
chr7151750199151750267+intron-Distal3.754855.06208K562MATR3
chr7151727754151727956+intron-Distal4.384326.90077HepG2PTBP1
chr7151750068151750135+intron-Distal4.814287.06647K562MATR3
chr7151742756151742794+intron-Distal4.091987.01277K562EXOSC5
chr7151776535151776662+intron-Distal,intron-Proximal3.251619.17902K562KHSRP
chr7151761067151761126+intron-Distal3.230395.02082K562EXOSC5
chr7151742028151742096+intron-Distal4.743985.76685K562EXOSC5
chr7151730228151730281+intron-Distal4.391513.18269HepG2XPO5
chr7151803207151803295+intron-Distal4.114093.89294K562KHSRP
chr7151743927151743969+intron-Distal3.288733.14999K562EXOSC5
chr7151743300151743332+intron-Distal5.6406411.84392K562HNRNPM
chr7151767403151767478+intron-Distal4.135773.06015K562MATR3
chr7151766372151766511+intron-Distal4.490434.39969K562TARDBP
chr7151749706151749793+intron-Distal3.493076.06238K562MATR3
chr7151762398151762502+intron-Distal3.592904.51915K562MATR3
chr7151757402151757509+intron-Distal4.480564.18579K562MATR3
chr7151769918151769973+intron-Distal3.209553.18966K562MATR3
chr7151767546151767656+intron-Distal4.839815.90588K562MATR3
chr7151732991151733109+intron-Distal4.433174.75572K562MATR3
chr7151727729151727836+intron-Distal5.1358024.65395K562PTBP1
chr7151750049151750100+intron-Distal3.957213.86809HepG2SUGP2
chr7151818053151818133+intron-Proximal4.603314.65563K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GALNT11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GALNT11 is not available on ENCORE database.

  • 104 RBPs can affect the levels of GALNT11.  








The Knockdown/knockout RNA-Seq assay for GALNT11 is not available on ENCORE database.





104 RBPs can affect the gene expression of GALNT11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GALNT11ENSG00000178234.8390.79990254.087600.621004.060302.78540HepG2AATF
GALNT11ENSG00000178234.8540.09510342.350900.657607.600706.69420HepG2ACO1
GALNT11ENSG00000178234.81053.66130333.642101.6589019.8106018.52120HepG2AKAP1
GALNT11ENSG00000178234.8532.58230292.439900.864806.921805.32140HepG2AKAP8
GALNT11ENSG00000178234.8495.15020344.006900.525304.650503.67620HepG2AKAP8L
GALNT11ENSG00000178234.8458.07280276.045400.730605.052704.00650HepG2ASCC1
GALNT11ENSG00000178234.8742.61880496.388200.581107.091406.07370HepG2AUH
GALNT11ENSG00000178234.8296.11000414.00140-0.483502.664302.07600HepG2BOP1
GALNT11ENSG00000178234.8537.71880345.646700.637505.808504.74410HepG2CALR
GALNT11ENSG00000178234.8833.15150486.519000.776006.073704.60300HepG2CCAR1
GALNT11ENSG00000178234.8407.85990262.267100.636903.851102.94700HepG2CIRBP
GALNT11ENSG00000178234.8506.76000342.333700.565805.001804.15610HepG2CKAP4
GALNT11ENSG00000178234.8624.76520293.704901.088805.890004.77330HepG2CNOT7
GALNT11ENSG00000178234.8493.39450380.087100.376302.036201.43640HepG2CPSF6
GALNT11ENSG00000178234.8189.32760308.95540-0.706504.981503.61630HepG2YBX3
GALNT11ENSG00000178234.8292.63340215.637000.440402.290501.30460HepG2CSTF2
GALNT11ENSG00000178234.8651.34030508.307200.357603.218502.42960HepG2DAZAP1
GALNT11ENSG00000178234.8571.24040280.069501.0282011.7686010.48470HepG2DDX21
GALNT11ENSG00000178234.8453.65840321.096500.498502.752801.46710HepG2DDX27
GALNT11ENSG00000178234.8810.54260319.570701.3427018.1206016.66750HepG2DDX3X
GALNT11ENSG00000178234.8467.63080309.296500.596304.252402.66340HepG2DDX47
GALNT11ENSG00000178234.8432.27940274.596000.654603.694302.98900HepG2DDX6
GALNT11ENSG00000178234.8360.06020263.898200.448201.969601.45990HepG2EIF2S1
GALNT11ENSG00000178234.8169.04500255.49850-0.595902.670201.78110HepG2EIF3D
GALNT11ENSG00000178234.8687.13740283.986201.2747011.9481010.56940HepG2EIF4B
GALNT11ENSG00000178234.8369.27100501.48900-0.441503.286702.38900HepG2EIF4G1
GALNT11ENSG00000178234.8596.80830334.588800.834809.227607.72730HepG2EWSR1
GALNT11ENSG00000178234.8940.71350436.362001.1081012.5797011.11290HepG2FIP1L1
GALNT11ENSG00000178234.8345.35480196.611400.812605.881404.75600HepG2FUBP3
GALNT11ENSG00000178234.8540.19170349.096300.629703.534902.27080HepG2FUS
GALNT11ENSG00000178234.8576.66250294.326800.970209.146907.95510HepG2FXR1
GALNT11ENSG00000178234.8518.17700272.971500.924607.911606.81680HepG2G3BP1
GALNT11ENSG00000178234.8345.88340227.482500.604403.417202.40860HepG2GEMIN5
GALNT11ENSG00000178234.8318.49200430.88920-0.436101.980501.43270HepG2GPKOW
GALNT11ENSG00000178234.8496.35130271.879200.868305.659804.05750HepG2GRSF1
GALNT11ENSG00000178234.8458.42200554.75800-0.275201.956201.34630HepG2HNRNPF
GALNT11ENSG00000178234.8422.26710276.547800.610503.711102.91040HepG2HNRNPK
GALNT11ENSG00000178234.8169.51140463.02450-1.4497023.5695021.80250HepG2HNRNPL
GALNT11ENSG00000178234.8598.44300338.425300.8223011.7090010.53420HepG2HNRNPU
GALNT11ENSG00000178234.8395.86760546.27370-0.464603.698202.87120HepG2IGF2BP1
GALNT11ENSG00000178234.8489.51460277.448300.819006.500005.50470HepG2IGF2BP2
GALNT11ENSG00000178234.8396.20210279.105300.505302.228401.34080HepG2KHSRP
GALNT11ENSG00000178234.8477.72270318.120200.586502.950401.66150HepG2KRR1
GALNT11ENSG00000178234.8706.62760513.613400.460202.424801.65040HepG2LARP4
GALNT11ENSG00000178234.8749.09100296.059501.3392016.0452014.62240HepG2MATR3
GALNT11ENSG00000178234.8403.95530267.388200.595202.289301.32990HepG2METAP2
GALNT11ENSG00000178234.8474.07730353.239200.424402.699501.89990HepG2MSI2
GALNT11ENSG00000178234.8638.70970303.018301.0757010.977509.75760HepG2NCBP2
GALNT11ENSG00000178234.8213.76250364.58750-0.770304.770603.79860HepG2NSUN2
GALNT11ENSG00000178234.8432.37770269.788600.680404.412203.51350HepG2PABPC4
GALNT11ENSG00000178234.8121.88850334.98370-1.4585017.6349015.83170HepG2PARN
GALNT11ENSG00000178234.8469.34070268.798400.804008.797007.81370HepG2PCBP1
GALNT11ENSG00000178234.8601.25360347.383400.791305.009903.40240HepG2PRPF6
GALNT11ENSG00000178234.8368.56140264.812000.476802.619401.83180HepG2PRPF8
GALNT11ENSG00000178234.8507.91220273.506000.8929010.9619010.01340HepG2PTBP1
GALNT11ENSG00000178234.8619.13220481.151700.363702.307001.75560HepG2PUF60
GALNT11ENSG00000178234.8673.97180510.768500.399904.256503.55460HepG2PUM1
GALNT11ENSG00000178234.8558.10290348.715000.678408.108007.14680HepG2PUS1
GALNT11ENSG00000178234.8431.05420296.227400.541103.657402.95420HepG2QKI
GALNT11ENSG00000178234.8737.83200318.865701.210209.041307.81340HepG2RAVER1
GALNT11ENSG00000178234.8827.51060476.350500.7967011.6876010.77720HepG2RBM22
GALNT11ENSG00000178234.8369.34590268.840300.458102.462101.82220HepG2RBM25
GALNT11ENSG00000178234.8505.25520375.856900.426702.396901.48180HepG2RBM27
GALNT11ENSG00000178234.8172.64470305.21210-0.822003.984902.71030HepG2RCC2
GALNT11ENSG00000178234.8485.02760304.391300.672005.998505.25280HepG2NELFE
GALNT11ENSG00000178234.8379.03670283.489500.418902.424101.84230HepG2RECQL
GALNT11ENSG00000178234.8405.15110248.631800.704305.178204.36730HepG2RPS19
GALNT11ENSG00000178234.8509.59790346.645500.555803.627302.71510HepG2RPS2
GALNT11ENSG00000178234.8445.91150261.966900.767305.079104.04780HepG2RRP9
GALNT11ENSG00000178234.8195.17790301.38300-0.626804.370603.59350HepG2SAFB2
GALNT11ENSG00000178234.8518.93150385.412600.429002.198401.59610HepG2SF3A3
GALNT11ENSG00000178234.8526.35250284.766600.8861010.449209.41280HepG2SF3B4
GALNT11ENSG00000178234.8436.12150351.463900.311302.006001.44440HepG2SMN1
GALNT11ENSG00000178234.8499.68840325.309500.619103.568402.46610HepG2SMNDC1
GALNT11ENSG00000178234.8650.26470297.229901.1293018.3690017.37600HepG2SRSF1
GALNT11ENSG00000178234.8601.46540475.072900.340202.673602.05540HepG2SRSF5
GALNT11ENSG00000178234.8450.48900317.265500.505702.569601.33350HepG2SSRP1
GALNT11ENSG00000178234.8413.03370267.148900.628505.081004.35900HepG2TAF15
GALNT11ENSG00000178234.8420.46420328.845100.354501.941801.50740HepG2TIAL1
GALNT11ENSG00000178234.8447.26490331.782900.430803.232602.63370HepG2TRIM56
GALNT11ENSG00000178234.8310.26140201.817500.620303.842202.94870HepG2UCHL5
GALNT11ENSG00000178234.8511.01290341.800600.580105.822104.86870HepG2UPF1
GALNT11ENSG00000178234.8438.16450312.898800.485702.426601.49100HepG2UPF2
GALNT11ENSG00000178234.8550.86390329.997300.739108.575107.61500HepG2UTP3
GALNT11ENSG00000178234.8370.70030278.717000.411402.619801.96380HepG2ZC3H8
GALNT11ENSG00000178234.8565.70000375.917300.589506.920906.15750HepG2ZNF622
GALNT11ENSG00000178234.82193.260301512.129700.5364011.9625010.87440K562AGGF1
GALNT11ENSG00000178234.82188.804701661.674700.397403.862102.65910K562AKAP8
GALNT11ENSG00000178234.82327.738201573.457400.564907.786506.64090K562AKAP8L
GALNT11ENSG00000178234.81138.120101587.92470-0.480504.613503.89080K562AQR
GALNT11ENSG00000178234.82136.197901650.969400.371605.261803.95620K562ATP5C1
GALNT11ENSG00000178234.81323.904701000.848900.403504.101802.79970K562DDX3X
GALNT11ENSG00000178234.82158.963801693.040600.350604.967403.74070K562DKC1
GALNT11ENSG00000178234.8605.88290886.69090-0.549403.543602.07840K562EEF2
GALNT11ENSG00000178234.8818.868101152.78560-0.493406.584305.54360K562EIF2S2
GALNT11ENSG00000178234.8327.98350549.93150-0.745604.007502.77290K562EIF3A
GALNT11ENSG00000178234.8607.03450917.32170-0.595604.520203.15900K562EIF3D
GALNT11ENSG00000178234.8568.19130770.91710-0.440203.928002.98810K562EIF3G
GALNT11ENSG00000178234.8740.519701045.66680-0.497804.636203.57460K562EIF4A3
GALNT11ENSG00000178234.81337.46350956.634700.483404.677403.55360K562FIP1L1
GALNT11ENSG00000178234.8915.595101087.45400-0.248201.948101.42270K562FXR1
GALNT11ENSG00000178234.81341.182401049.453400.353803.093801.55840K562G3BP1
GALNT11ENSG00000178234.8644.04610984.53330-0.612306.706705.81710K562HNRNPC
GALNT11ENSG00000178234.8836.564301318.82850-0.656708.936906.95320K562HNRNPL
GALNT11ENSG00000178234.82393.435901669.768800.519307.366605.85870K562KIF1C
GALNT11ENSG00000178234.8884.509101153.62500-0.383203.319502.39290K562MAGOH
GALNT11ENSG00000178234.82046.138501598.430500.356103.281502.08310K562MAK16
GALNT11ENSG00000178234.82637.758001870.571600.495706.879005.31830K562MBNL1
GALNT11ENSG00000178234.81884.294101311.140700.523103.929002.82650K562NAA15
GALNT11ENSG00000178234.8755.539501253.72770-0.730604.898003.22230K562PABPC1
GALNT11ENSG00000178234.8278.59650541.98040-0.960105.811602.85730K562PARN
GALNT11ENSG00000178234.8647.20080833.69720-0.365302.227301.55040K562PRPF8
GALNT11ENSG00000178234.82470.259601560.310100.662709.457208.50240K562PUS1
GALNT11ENSG00000178234.82143.590001520.393100.495508.299207.29960K562RBM15
GALNT11ENSG00000178234.8835.104801074.72870-0.363902.774801.93360K562RBM22
GALNT11ENSG00000178234.8621.83430805.37590-0.373102.732701.74810K562RCC2
GALNT11ENSG00000178234.8648.83740849.23070-0.388302.061601.36150K562RPS19
GALNT11ENSG00000178234.8851.700001176.52700-0.466103.581602.42710K562RPS3
GALNT11ENSG00000178234.8610.80510849.04510-0.475103.319102.28820K562TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GALNT11 is not available on ENCORE database.





4 RBPs can affect the splicing of GALNT11 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGALNT11ENSG00000178234.8chr7+151797909151798006151791274151791607151800196151800259-0.188000.008330.07898excludedHepG2U2AF2
SEGALNT11ENSG00000178234.8chr7+1517246811517248031517227981517229691517912741517916070.176000.000460.00628includedK562AQR
SEGALNT11ENSG00000178234.8chr7+151797882151798006151791274151791607151800196151800337-0.096000.001520.02719excludedK562HNRNPC
A5SSGALNT11ENSG00000178234.8chr7+1518002881518004481518002881518003631518023291518024550.081000.000000.00000longerK562RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GALNT11 is not avaliable on ENCORE database.