FYTTD1

General Information

Gene Name       : FYTTD1
Gene ID             : ENSG00000122068.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FYTTD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FYTTD1ENSG00000122068.1263.6056.0159.80ENCSR000AEF
HepG2FYTTD1ENSG00000122068.1212.4520.1016.27ENCSR985KAT
K562FYTTD1ENSG00000122068.1252.0658.9255.49ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq FYTTD1-BGKcLV21-K562ENCSR832XLBFYTTD1K562ReleasedENCSR854OFV   CRISPRKD% = 67.2,71.5






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
FYTTD1ENCAB933RZKA303-525A1BGKcLV21-25, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
FYTTD1K562CRISPRENCSR832XLBENCSR854OFVFYTTD1-BGKcLV21-25,FYTTD1-BGKcLV21-26NT-BGKcLV21-1,NT-BGKcLV21-267.2,71.5ReleasedENCODE4
FYTTD1HepG2CRISPRBGHcLV22-27,BGHcLV22-28BGHcLV22-1,BGHcLV22-20.0,0.0NotSatisfiedENCODE4
FYTTD1HepG2CRISPRBGHcLV24-33,BGHcLV24-34BGHcLV24-1,BGHcLV24-2NotSatisfiedENCODE4
FYTTD1HepG2CRISPRBGHcLV25-33,BGHcLV25-34BGHcLV25-1,BGHcLV25-20.0,0.0NotSatisfiedENCODE4
FYTTD1HepG2CRISPRBGHcLV25-35,BGHcLV25-36BGHcLV25-1,BGHcLV25-20.0,0.0NotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
FYTTD1Product_ID: A303-525A
Lot_ID: 1
Source: Bethyl Labs
Target Name: FYTTD1-human		 FYTTD1-K562-CRISPR-A303-525A.png<br>Caption: Western blot following CRISPR against FYTTD1 in K562 whole cell lysate using FYTTD1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against FYTTD1. FYTTD1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for FYTTD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • FYTTD1 RNA is bound by 22 proteins.  







eCLIP assay for FYTTD1 is not avaliable on ENCORE database.





22 proteins are bound to FYTTD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3197510280197510336+3'-UTR4.005333.39858K562IGF2BP2
chr3197509607197509650+3'-UTR3.409536.64080K562FAM120A
chr3197509932197510095+3'-UTR3.2064328.83956K562FAM120A
chr3197510532197510573+3'-UTR3.739733.09815K562IGF2BP1
chr3197510168197510265+3'-UTR3.779595.48238K562IGF2BP1
chr3197510089197510138+3'-UTR3.964643.89948K562YBX3
chr3197501018197501059+3'-UTR,CDS,intron-Proximal4.3656610.79362K562LIN28B
chr3197509870197509932+3'-UTR5.4293018.73621K562FAM120A
chr3197509948197510034+3'-UTR3.038645.79469K562IGF2BP2
chr3197509942197510026+3'-UTR3.217535.56979K562YBX3
chr3197510190197510254+3'-UTR3.3661011.88622K562FAM120A
chr3197509693197509711+3'-UTR5.202026.31097K562FAM120A
chr3197510371197510432+3'-UTR3.321234.05694K562IGF2BP1
chr3197495308197495436+3'-UTR,CDS,intron-Proximal3.167904.38893K562ZNF800
chr3197500339197500373+3'-UTR,CDS,intron-Proximal3.936577.73347K562LIN28B
chr3197510679197510726+3'-UTR4.4861315.54683K562PUM2
chr3197510552197510630+3'-UTR3.121375.09741K562UPF1
chr3197510866197510921+3'-UTR4.225448.26051K562PUM2
chr3197511097197511149+3'-UTR4.2430711.77823K562PABPC4
chr3197477309197477382+5'-UTR,intron-Distal,intron-Proximal3.184174.10340K562NONO
chr3197477001197477084+5'-UTR,intron-Distal,intron-Proximal3.755664.86331K562HNRNPM
chr3197477043197477108+5'-UTR,intron-Distal,intron-Proximal4.544644.96496K562NONO
chr3197477317197477413+5'-UTR,intron-Distal3.999265.02933K562CSTF2T
chr3197477306197477377+5'-UTR,intron-Distal,intron-Proximal3.723274.61999K562HNRNPM
chr3197477009197477090+5'-UTR,intron-Distal,intron-Proximal5.135774.83371K562EFTUD2
chr3197477330197477421+5'-UTR,intron-Distal4.616155.68226HepG2HNRNPM
chr3197483272197483336+5'-UTR,CDS,intron-Proximal3.170185.11245K562AQR
chr3197476952197477058+5'-UTR,intron-Distal,intron-Proximal4.0159813.85581K562EXOSC5
chr3197476995197477107+5'-UTR,intron-Distal,intron-Proximal4.1237510.99589K562CSTF2T
chr3197483369197483428+5'-UTR,CDS3.294593.50904K562LIN28B
chr3197477058197477096+5'-UTR,intron-Distal3.607844.31658K562EXOSC5
chr3197477171197477232+5'-UTR,intron-Distal,intron-Proximal4.629454.03833K562HNRNPM
chr3197476987197477119+5'-UTR,intron-Distal,intron-Proximal3.332793.00221HepG2CSTF2T
chr3197483331197483421+5'-UTR,CDS3.022685.26399HepG2AQR
chr3197476820197476879+5'-UTR,CDS,intron-Distal3.7970313.84542K562DDX3X
chr3197476977197477088+5'-UTR,intron-Distal,intron-Proximal3.626836.39716K562GEMIN5
chr3197477170197477222+5'-UTR,intron-Distal,intron-Proximal3.903793.01456K562EXOSC5
chr3197483272197483331+5'-UTR,CDS,intron-Proximal5.012227.09786HepG2AQR
chr3197476995197477105+5'-UTR,intron-Distal,intron-Proximal3.258667.03130K562PRPF8
chr3197476879197476934+CDS,intron-Distal4.0415321.55391K562DDX3X
chr3197476915197477034+CDS,intron-Distal,intron-Proximal4.108543.25089HepG2AQR
chr3197477941197477995+intron-Distal3.468495.10669K562HNRNPM
chr3197485575197485634+intron-Distal5.187757.38793K562EXOSC5
chr3197488791197488838+intron-Distal3.894495.50914K562EXOSC5
chr3197485803197485859+intron-Distal5.433247.38693K562EXOSC5
chr3197478059197478114+intron-Distal3.743864.32964K562HNRNPM
chr3197479857197479988+intron-Distal4.476894.28571K562HNRNPM
chr3197485684197485772+intron-Distal4.7579517.34220K562EXOSC5
chr3197479454197479505+intron-Distal4.177543.01445K562EXOSC5
chr3197487665197487709+intron-Distal3.614774.61282K562EXOSC5
chr3197480268197480336+intron-Distal4.354394.80665HepG2QKI
chr3197507113197507167+intron-Distal4.5336710.10490K562AGGF1
chr3197485407197485464+intron-Distal5.3694710.34009K562EXOSC5
chr3197477713197477787+intron-Distal,intron-Proximal5.183846.73640K562EXOSC5
chr3197487038197487083+intron-Distal5.6351912.32698K562EXOSC5
chr3197486940197487038+intron-Distal6.5234922.69215K562EXOSC5
chr3197485486197485516+intron-Distal4.651775.76606K562EXOSC5
chr3197508525197508636+intron-Distal,intron-Proximal3.666843.02234K562KHSRP
chr3197478042197478106+intron-Distal5.091988.03988K562EXOSC5
chr3197488468197488562+intron-Distal6.7889027.73925K562EXOSC5
chr3197479715197479785+intron-Distal3.542214.31658K562EXOSC5
chr3197480103197480167+intron-Distal4.749736.08953K562EXOSC5
chr3197485634197485684+intron-Distal4.027764.61337K562EXOSC5
chr3197506575197506677+intron-Distal4.280204.71638K562HNRNPL
chr3197488616197488656+intron-Distal4.638545.12361K562EXOSC5
chr3197480172197480346+intron-Distal3.472897.08481K562KHSRP
chr3197477855197477960+intron-Distal5.223508.03988K562EXOSC5
chr3197506947197507061+intron-Distal4.470635.41154K562HNRNPL
chr3197505455197505634+intron-Distal4.202914.58794K562KHSRP
chr3197486896197486940+intron-Distal5.8603114.65278K562EXOSC5
chr3197477876197477922+intron-Distal4.405724.53244K562HNRNPM
chr3197486814197486877+intron-Distal5.9825614.98801K562EXOSC5
chr3197506886197506923+intron-Distal4.300483.42885K562AGGF1
chr3197500543197500610+intron-Distal3.884433.02181K562PRPF8
chr3197507005197507141+intron-Distal4.376783.98095HepG2HNRNPL
chr3197478045197478097+intron-Distal4.277113.97018HepG2HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FYTTD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FYTTD1 is not available on ENCORE database.

  • 87 RBPs can affect the levels of FYTTD1.  








The Knockdown/knockout RNA-Seq assay for FYTTD1 is not available on ENCORE database.





87 RBPs can affect the gene expression of FYTTD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FYTTD1ENSG00000122068.81821.574401173.286600.634505.800705.06280HepG2AKAP1
FYTTD1ENSG00000122068.81251.40170970.813800.366202.483801.73690HepG2ASCC1
FYTTD1ENSG00000122068.81320.270901047.368500.334004.011903.21440HepG2AUH
FYTTD1ENSG00000122068.81371.29670813.746000.7528010.308509.24930HepG2BOP1
FYTTD1ENSG00000122068.8722.37160922.33420-0.352502.134501.44980HepG2CIRBP
FYTTD1ENSG00000122068.81130.95300853.328400.406303.923503.18260HepG2CELF1
FYTTD1ENSG00000122068.8737.02430612.683400.266502.314701.54730HepG2DDX19B
FYTTD1ENSG00000122068.8816.19310523.645400.640206.922105.48790HepG2DDX24
FYTTD1ENSG00000122068.8436.23750578.17430-0.406403.222802.46860HepG2DNAJC21
FYTTD1ENSG00000122068.8604.95640436.360300.471203.027801.87130HepG2EFTUD2
FYTTD1ENSG00000122068.81296.86830905.219200.518607.796406.52390HepG2EIF4G1
FYTTD1ENSG00000122068.81437.244401202.447000.257202.820202.21460HepG2ETF1
FYTTD1ENSG00000122068.8933.42190647.367100.527802.614801.80220HepG2EWSR1
FYTTD1ENSG00000122068.8773.850901034.83290-0.419302.883102.17640HepG2FXR1
FYTTD1ENSG00000122068.8828.67160632.469900.389702.808801.82500HepG2HDGF
FYTTD1ENSG00000122068.8283.49420583.71260-1.0419011.8976010.70850HepG2HNRNPA1
FYTTD1ENSG00000122068.8657.16690971.95580-0.564605.020304.09970HepG2HNRNPK
FYTTD1ENSG00000122068.8505.51930835.92370-0.7256013.1535011.78650HepG2HNRNPL
FYTTD1ENSG00000122068.8535.20980658.80870-0.299802.635301.91820HepG2ILF2
FYTTD1ENSG00000122068.8768.48250587.109000.388302.827501.68210HepG2LARP7
FYTTD1ENSG00000122068.81349.466601041.008400.374302.320701.73930HepG2MATR3
FYTTD1ENSG00000122068.8919.79060663.902900.470202.435801.45840HepG2PCBP2
FYTTD1ENSG00000122068.8402.00940575.25630-0.517004.793803.85020HepG2PPIL4
FYTTD1ENSG00000122068.8788.17530546.555500.528006.216005.10770HepG2PRPF4
FYTTD1ENSG00000122068.8691.77560494.259200.484902.955102.12250HepG2PRPF8
FYTTD1ENSG00000122068.81108.12020916.253300.274202.517601.99170HepG2PTBP1
FYTTD1ENSG00000122068.8774.29760921.99440-0.251902.653502.06990HepG2PUM1
FYTTD1ENSG00000122068.81212.26640921.340500.395803.758102.98200HepG2PUM2
FYTTD1ENSG00000122068.81486.971901005.038200.565009.122808.30650HepG2RBM22
FYTTD1ENSG00000122068.81127.64510900.591900.324302.535001.88680HepG2RBM25
FYTTD1ENSG00000122068.8950.13490488.916800.958409.848208.49850HepG2RRP9
FYTTD1ENSG00000122068.8462.25430574.37800-0.313302.354701.75290HepG2SAFB2
FYTTD1ENSG00000122068.8574.18710414.968400.468402.928201.95880HepG2SERBP1
FYTTD1ENSG00000122068.81120.91280953.927200.232601.931801.42290HepG2SF3B4
FYTTD1ENSG00000122068.81467.34160890.089300.721105.170104.09160HepG2SNRNP70
FYTTD1ENSG00000122068.82104.511401135.180300.8905031.1867029.97950HepG2SRFBP1
FYTTD1ENSG00000122068.81508.48320995.697900.5992011.4190010.60000HepG2SRSF1
FYTTD1ENSG00000122068.81345.93890985.651800.449407.269006.51390HepG2SSB
FYTTD1ENSG00000122068.81326.22890975.301800.443305.099504.29850HepG2SUCLG1
FYTTD1ENSG00000122068.8917.43860637.900600.524203.300702.56940HepG2SUPV3L1
FYTTD1ENSG00000122068.8750.15820894.98430-0.254701.975201.48780HepG2TAF15
FYTTD1ENSG00000122068.8528.39070632.29570-0.259001.916901.43090HepG2TRIM56
FYTTD1ENSG00000122068.81104.99950848.505200.381003.179502.23730HepG2TUFM
FYTTD1ENSG00000122068.81533.63180626.595901.2912019.0943017.39260HepG2U2AF1
FYTTD1ENSG00000122068.81159.06890898.095700.367902.031201.31980HepG2UBE2L3
FYTTD1ENSG00000122068.8939.27890753.242300.318303.252802.50700HepG2UPF1
FYTTD1ENSG00000122068.81149.25000727.227600.6601011.9508010.84170HepG2UTP3
FYTTD1ENSG00000122068.8482.80540627.94390-0.379202.115501.47380HepG2XRN2
FYTTD1ENSG00000122068.8439.44060539.39270-0.295702.103901.50590HepG2ZC3H8
FYTTD1ENSG00000122068.84128.685302933.453800.4930013.0885011.95150K562AGGF1
FYTTD1ENSG00000122068.84186.928003052.400200.455805.873104.89840K562AKAP8L
FYTTD1ENSG00000122068.83314.458904263.98950-0.363403.975403.29670K562AQR
FYTTD1ENSG00000122068.83713.608003202.718800.213402.360101.52320K562ATP5C1
FYTTD1ENSG00000122068.81939.197702273.75500-0.229602.793301.82840K562BCLAF1
FYTTD1ENSG00000122068.8718.874301003.64140-0.481404.144002.80020K562CCAR1
FYTTD1ENSG00000122068.82662.949403586.24350-0.429402.819001.52610K562CIRBP
FYTTD1ENSG00000122068.82884.599003774.13470-0.387805.858604.20290K562CPEB4
FYTTD1ENSG00000122068.83429.305303904.73640-0.187302.167601.57940K562DDX47
FYTTD1ENSG00000122068.84144.019003284.547600.335205.415304.13500K562DKC1
FYTTD1ENSG00000122068.82369.753702926.52600-0.304502.830401.60590K562EIF2S1
FYTTD1ENSG00000122068.81727.470602783.41040-0.688209.365507.85190K562EIF4A3
FYTTD1ENSG00000122068.81866.207802506.70260-0.425703.276301.99670K562EIF4B
FYTTD1ENSG00000122068.82461.134202894.64600-0.234101.968401.44120K562FXR1
FYTTD1ENSG00000122068.81578.505502112.34950-0.420304.439303.44030K562GPKOW
FYTTD1ENSG00000122068.81278.307201811.86840-0.503205.565502.79730K562GRWD1
FYTTD1ENSG00000122068.81169.122002084.77680-0.8345015.9330014.58040K562HNRNPC
FYTTD1ENSG00000122068.81368.531601861.64740-0.444004.887903.31580K562HNRNPF
FYTTD1ENSG00000122068.82409.706503528.97380-0.550408.575606.64160K562HNRNPL
FYTTD1ENSG00000122068.82589.135703344.40380-0.369302.589101.60700K562IGF2BP2
FYTTD1ENSG00000122068.84480.104503239.329500.467703.027802.16160K562KIF1C
FYTTD1ENSG00000122068.81203.549001803.54820-0.583504.563903.32950K562KRR1
FYTTD1ENSG00000122068.83823.836703100.859800.302302.717901.65420K562MAK16
FYTTD1ENSG00000122068.81680.023602061.86710-0.295502.504101.67490K562METAP2
FYTTD1ENSG00000122068.84186.414905106.76460-0.286702.370201.32870K562MSI2
FYTTD1ENSG00000122068.82128.484902689.35640-0.337406.036604.87940K562MTPAP
FYTTD1ENSG00000122068.83903.897002543.578700.618003.114102.16970K562NAA15
FYTTD1ENSG00000122068.81488.618701976.00070-0.408603.175501.76480K562NONO
FYTTD1ENSG00000122068.82385.624602988.12060-0.324907.895706.72470K562NSUN2
FYTTD1ENSG00000122068.81450.687902052.56840-0.500704.318702.34500K562NUSAP1
FYTTD1ENSG00000122068.81761.654902214.43290-0.330002.292001.53550K562PCBP3
FYTTD1ENSG00000122068.81527.468502035.34260-0.414104.188602.37880K562PHF6
FYTTD1ENSG00000122068.81241.743501869.20390-0.590107.325705.72330K562PSIP1
FYTTD1ENSG00000122068.85698.490503027.082500.9126018.9136017.52680K562PUS1
FYTTD1ENSG00000122068.84127.095502949.486300.484609.519008.44280K562RBM15
FYTTD1ENSG00000122068.82478.610603276.92150-0.402802.549201.74630K562RBM22
FYTTD1ENSG00000122068.81074.952201705.32460-0.6658010.405508.47760K562RCC2
FYTTD1ENSG00000122068.81094.935201616.61060-0.562106.448704.70120K562SRFBP1
FYTTD1ENSG00000122068.82396.316103020.80790-0.334106.843905.44580K562SRPK2
FYTTD1ENSG00000122068.81363.967601890.54720-0.471003.397202.25990K562SUPV3L1
FYTTD1ENSG00000122068.82299.282703389.89370-0.560104.010803.15160K562TARDBP
FYTTD1ENSG00000122068.82494.886903269.82430-0.390202.846402.01470K562TIA1
FYTTD1ENSG00000122068.81340.433001797.87140-0.423603.429402.38280K562TIAL1
FYTTD1ENSG00000122068.81334.471601909.91460-0.517205.978104.46670K562TRIM56
FYTTD1ENSG00000122068.82814.658703168.36730-0.170802.001601.38370K562UPF1
FYTTD1ENSG00000122068.82153.645802711.07240-0.332103.523602.53750K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FYTTD1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of FYTTD1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FYTTD1 is not avaliable on ENCORE database.