FXYD1

General Information

Gene Name       : FXYD1
Gene ID             : ENSG00000266964.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FXYD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FXYD1ENSG00000266964.50.000.230.12ENCSR000AEF
HepG2FXYD1ENSG00000266964.56.483.164.82ENCSR985KAT
K562FXYD1ENSG00000266964.51.550.481.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FXYD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • FXYD1 RNA is bound by 7 proteins.  







eCLIP assay for FXYD1 is not avaliable on ENCORE database.





7 proteins are bound to FXYD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr193563362235633668+3'-UTR,CDS,intron-Proximal3.573673.05161HepG2PPIG
chr193563367535633700+3'-UTR,intron-Proximal3.671313.96535HepG2AQR
chr193563370335633778+3'-UTR,intron-Proximal3.500994.59965HepG2PRPF4
chr193563370635633822+3'-UTR,intron-Proximal5.0108128.70461HepG2AQR
chr193563382835633881+3'-UTR3.689774.37595HepG2LARP4
chr193563337535633407+CDS,intron-Proximal3.470523.41665HepG2GRWD1
chr193563225835632390+CDS,intron-Distal,intron-Proximal6.5556020.89654HepG2DDX59
chr193563165335631754+intron-Distal4.322323.74583HepG2PTBP1
chr193562993135629989+intron-Distal4.126264.10323HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FXYD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FXYD1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of FXYD1.  








The Knockdown/knockout RNA-Seq assay for FXYD1 is not available on ENCORE database.





99 RBPs can affect the gene expression of FXYD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FXYD1ENSG00000266964.132.9375078.68740-1.256403.289601.41580HepG2AARS
FXYD1ENSG00000266964.145.14870109.25280-1.274904.683403.32050HepG2AATF
FXYD1ENSG00000266964.122.09990189.33990-3.098906.517305.66490HepG2ACO1
FXYD1ENSG00000266964.18.0317049.55170-2.625104.605903.36050HepG2ADAR
FXYD1ENSG00000266964.137.95940456.44200-3.587907.495006.66400HepG2AKAP1
FXYD1ENSG00000266964.1381.82070190.320101.004404.718803.73890HepG2AKAP8L
FXYD1ENSG00000266964.141.3497080.28270-0.957202.228201.39110HepG2BCCIP
FXYD1ENSG00000266964.134.8288069.75460-1.002002.254201.44320HepG2BCLAF1
FXYD1ENSG00000266964.128.49130108.43760-1.928302.096101.41740HepG2CALR
FXYD1ENSG00000266964.186.98170189.40780-1.122702.118901.52490HepG2CKAP4
FXYD1ENSG00000266964.197.94820361.14760-1.8825016.0788014.29120HepG2CNOT7
FXYD1ENSG00000266964.1179.8336023.708702.923102.341301.70170HepG2CPSF6
FXYD1ENSG00000266964.116.0181049.58320-1.630103.677302.45120HepG2CSTF2
FXYD1ENSG00000266964.14.92400146.40800-4.8940033.4192031.68730HepG2CELF1
FXYD1ENSG00000266964.1633.49540157.431002.0085054.0870051.68380HepG2DAZAP1
FXYD1ENSG00000266964.113.5193050.89120-1.912402.526001.42150HepG2DDX1
FXYD1ENSG00000266964.1109.52930245.87500-1.166602.982101.63770HepG2DDX47
FXYD1ENSG00000266964.115.6569078.93710-2.333907.808306.58830HepG2DDX55
FXYD1ENSG00000266964.17.2441026.92280-1.893902.291501.40480HepG2DDX59
FXYD1ENSG00000266964.1213.6943049.907002.098108.403407.23070HepG2DNAJC21
FXYD1ENSG00000266964.155.18590110.97110-1.007803.240802.03320HepG2AGO1
FXYD1ENSG00000266964.131.51310136.73700-2.117405.186403.61480HepG2EIF2S2
FXYD1ENSG00000266964.165.38350113.78080-0.799302.589301.54540HepG2EIF3G
FXYD1ENSG00000266964.11028.70660398.740601.367208.672707.54490HepG2EIF4A3
FXYD1ENSG00000266964.119.50750388.51760-4.315909.445208.21200HepG2EIF4B
FXYD1ENSG00000266964.1624.97680148.777902.0705037.5232034.99840HepG2EIF4G2
FXYD1ENSG00000266964.175.07230156.17820-1.056802.571101.51690HepG2ESF1
FXYD1ENSG00000266964.145.78450182.13590-1.992104.743803.75810HepG2FIP1L1
FXYD1ENSG00000266964.1246.66800147.281000.743903.677301.75940HepG2FMR1
FXYD1ENSG00000266964.1118.02200383.17810-1.6990019.9619017.94780HepG2FUBP3
FXYD1ENSG00000266964.117.8464074.80250-2.067505.281503.77500HepG2FUS
FXYD1ENSG00000266964.1123.13320402.76860-1.709702.835502.13420HepG2FXR1
FXYD1ENSG00000266964.183.5548026.877101.636204.920704.08280HepG2GPKOW
FXYD1ENSG00000266964.1203.56630334.30070-0.715602.618401.53970HepG2GRSF1
FXYD1ENSG00000266964.1128.57830298.13610-1.213308.734206.14090HepG2HNRNPAB
FXYD1ENSG00000266964.1141.4480015.517703.1882025.2067023.34880HepG2HNRNPF
FXYD1ENSG00000266964.187.65810378.64830-2.110903.832103.02120HepG2HNRNPK
FXYD1ENSG00000266964.1273.48240143.409500.931207.727006.64950HepG2HNRNPL
FXYD1ENSG00000266964.1137.4809025.649202.422102.595901.98260HepG2HNRNPLL
FXYD1ENSG00000266964.122.0328055.66570-1.337102.265501.71180HepG2HNRNPU
FXYD1ENSG00000266964.135.26530356.44530-3.337406.459904.99170HepG2IGF2BP3
FXYD1ENSG00000266964.1614.82300344.032200.837506.697604.74260HepG2KHDRBS1
FXYD1ENSG00000266964.134.42290111.55770-1.696408.228605.56670HepG2CCAR2
FXYD1ENSG00000266964.138.70150123.48550-1.673908.106106.26070HepG2LARP7
FXYD1ENSG00000266964.18.69920104.55920-3.5873018.7520015.43500HepG2MARK2
FXYD1ENSG00000266964.1118.95840405.09210-1.767803.400902.70820HepG2MATR3
FXYD1ENSG00000266964.167.23660147.26540-1.131102.376501.62320HepG2MSI2
FXYD1ENSG00000266964.1129.5145026.155602.307802.443601.53760HepG2MTPAP
FXYD1ENSG00000266964.192.26430414.57400-2.167804.278403.49690HepG2NCBP2
FXYD1ENSG00000266964.114.0732072.49760-2.365007.456405.64950HepG2NONO
FXYD1ENSG00000266964.1208.0771022.741903.1936027.1043025.15550HepG2NSUN2
FXYD1ENSG00000266964.1180.22480368.92810-1.033501.956301.34050HepG2PABPC4
FXYD1ENSG00000266964.149.68070401.02550-3.0129056.2031054.11860HepG2PCBP1
FXYD1ENSG00000266964.117.7941070.82140-1.992804.076102.83020HepG2PCBP2
FXYD1ENSG00000266964.1203.6624049.650802.0362019.1586017.35130HepG2PPIL4
FXYD1ENSG00000266964.117.3444074.46020-2.102004.182602.70130HepG2PRPF6
FXYD1ENSG00000266964.19.5106060.88020-2.678407.510006.25580HepG2PRPF8
FXYD1ENSG00000266964.120.33590140.89610-2.7925013.172709.74370HepG2PSIP1
FXYD1ENSG00000266964.125.17560408.08700-4.0188055.2071053.45400HepG2PTBP1
FXYD1ENSG00000266964.123.76010158.18590-2.7350022.6215021.26100HepG2PUM1
FXYD1ENSG00000266964.123.60440192.87090-3.030506.739705.85020HepG2PUS1
FXYD1ENSG00000266964.1140.78960441.90750-1.6502016.7852015.43540HepG2QKI
FXYD1ENSG00000266964.16.4956068.37370-3.395907.943706.78580HepG2RAVER1
FXYD1ENSG00000266964.116.44360174.97800-3.4116027.8899026.58600HepG2RBM22
FXYD1ENSG00000266964.1234.21220401.08240-0.776102.130901.53320HepG2RBM25
FXYD1ENSG00000266964.186.56480148.90440-0.782502.798701.80190HepG2RBM27
FXYD1ENSG00000266964.1148.6041068.085301.126004.470601.84650HepG2RBM34
FXYD1ENSG00000266964.1101.69340454.13790-2.1589036.1814034.70110HepG2NELFE
FXYD1ENSG00000266964.1107.15500423.01080-1.9810024.2681022.75750HepG2RECQL
FXYD1ENSG00000266964.169.7747016.712002.061706.519405.53400HepG2RPLP0
FXYD1ENSG00000266964.13.5347044.79340-3.663602.153201.60460HepG2RPS19
FXYD1ENSG00000266964.159.43660137.32780-1.208205.150004.07870HepG2RPS2
FXYD1ENSG00000266964.18.6498060.22180-2.799607.530106.31090HepG2RRP9
FXYD1ENSG00000266964.1118.5834049.577701.258005.868104.98480HepG2SAFB2
FXYD1ENSG00000266964.1533.03960344.467700.629803.127101.47360HepG2SBDS
FXYD1ENSG00000266964.1140.4585044.996001.642202.404701.52530HepG2SERBP1
FXYD1ENSG00000266964.136.12530168.62520-2.2227015.3924013.72680HepG2SF3A3
FXYD1ENSG00000266964.1149.8645025.388502.5613016.4181014.85390HepG2SF3B1
FXYD1ENSG00000266964.189.55580424.82010-2.2460037.2837035.57740HepG2SF3B4
FXYD1ENSG00000266964.1506.26560142.879701.8250031.3663029.52250HepG2SLBP
FXYD1ENSG00000266964.17.5037057.82410-2.946005.312604.47080HepG2SMN1
FXYD1ENSG00000266964.188.34390197.63310-1.161607.279006.57260HepG2SRFBP1
FXYD1ENSG00000266964.14.57740443.44110-6.59810113.19060111.25420HepG2SRSF1
FXYD1ENSG00000266964.169.70810147.13000-1.077705.263804.44260HepG2SRSF5
FXYD1ENSG00000266964.1103.4462015.244602.762406.193105.21800HepG2SRSF7
FXYD1ENSG00000266964.1133.96060360.78090-1.4293018.6257017.42620HepG2SRSF9
FXYD1ENSG00000266964.1241.86370171.595600.495102.522202.02750HepG2SSB
FXYD1ENSG00000266964.1191.02870315.35760-0.723204.036802.68600HepG2STIP1
FXYD1ENSG00000266964.148.17590167.32940-1.7963012.8720011.69560HepG2SUCLG1
FXYD1ENSG00000266964.1217.71810122.863800.825303.009502.03260HepG2SUPT6H
FXYD1ENSG00000266964.185.41110398.64010-2.2226019.7948018.48990HepG2TAF15
FXYD1ENSG00000266964.18.3837052.66490-2.651205.330904.01460HepG2TFIP11
FXYD1ENSG00000266964.1227.65550366.23440-0.685904.249703.22210HepG2TIA1
FXYD1ENSG00000266964.1184.6885045.947202.006905.999204.49300HepG2U2AF2
FXYD1ENSG00000266964.111.8443046.41510-1.970404.553503.57730HepG2UCHL5
FXYD1ENSG00000266964.146.23480144.37910-1.642809.045108.06420HepG2UTP3
FXYD1ENSG00000266964.111.1705075.16440-2.750405.001203.60260HepG2XRCC6
FXYD1ENSG00000266964.19.7895067.95430-2.795303.989803.20760HepG2ZC3H8
FXYD1ENSG00000266964.165.01120164.47030-1.339104.542503.88650HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FXYD1 is not available on ENCORE database.





7 RBPs can affect the splicing of FXYD1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFXYD1ENSG00000266964.1chr19+356309793563104035629711356297983563150035631533-0.084000.001000.05654excludedHepG2NCBP2
A3SSFXYD1ENSG00000266964.1chr19+3563203535632110356320523563211035631500356315330.094000.000080.03579longerHepG2HNRNPUL1
A3SSFXYD1ENSG00000266964.1chr19+3563203535632110356320523563211035631500356315330.090000.000190.00679longerHepG2U2AF2
RIFXYD1ENSG00000266964.1chr19+356336233563395435633623356336753563382035633954-0.057000.000540.03683excludedHepG2TBRG4
RIFXYD1ENSG00000266964.1chr19+3563203535632476356320353563211035632439356324760.607000.000000.00000includedHepG2U2AF2
RIFXYD1ENSG00000266964.1chr19+3563203535632476356320353563211035632439356324760.299000.000000.00000includedHepG2U2AF1
RIFXYD1ENSG00000266964.1chr19+356336233563395435633623356336753563382035633954-0.177000.005760.08909excludedHepG2KHSRP
RIFXYD1ENSG00000266964.1chr19+356320353563247635632035356321103563243935632476-0.142000.000770.04178excludedHepG2LARP4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FXYD1 is not avaliable on ENCORE database.