FAM117B

General Information

Gene Name       : FAM117B
Gene ID             : ENSG00000138439.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM117B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM117BENSG00000138439.114.484.034.26ENCSR000AEF
HepG2FAM117BENSG00000138439.116.279.677.97ENCSR985KAT
K562FAM117BENSG00000138439.112.612.262.43ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM117B is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM117B RNA is bound by 11 proteins.  







eCLIP assay for FAM117B is not avaliable on ENCORE database.





11 proteins are bound to FAM117B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2203630831203630892+3'-UTR4.283864.10495HepG2AGGF1
chr2203630826203630886+3'-UTR4.4761512.90102HepG2HNRNPL
chr2203630793203630817+3'-UTR4.7324110.68378K562HNRNPL
chr2203630830203630889+3'-UTR3.248096.33268K562AGGF1
chr2203630757203630826+3'-UTR4.2679742.51902HepG2HNRNPL
chr2203630774203630793+3'-UTR3.350244.54306K562HNRNPL
chr2203630817203630857+3'-UTR4.987727.67538K562HNRNPL
chr2203622083203622171+CDS,intron-Proximal3.234403.94979HepG2BCLAF1
chr2203590972203591104+CDS,intron-Proximal3.272678.43208HepG2BCLAF1
chr2203620182203620273+CDS,intron-Proximal4.332274.59919HepG2AQR
chr2203627322203627442+intron-Distal4.334684.27913HepG2CSTF2
chr2203604056203604190+intron-Distal4.1650514.83080HepG2PTBP1
chr2203604171203604246+intron-Distal5.5931211.47623HepG2PCBP2
chr2203567868203567965+intron-Distal3.087884.40834HepG2QKI
chr2203575401203575474+intron-Distal4.7168511.39284HepG2QKI
chr2203530172203530292+intron-Distal3.922975.42334HepG2QKI
chr2203626915203627062+intron-Distal4.863554.55788HepG2QKI
chr2203609087203609162+intron-Distal3.883053.24150HepG2HLTF
chr2203509538203509623+intron-Distal3.559913.11000HepG2HNRNPM
chr2203582135203582190+intron-Distal4.031563.69388HepG2XPO5
chr2203613653203613738+intron-Distal4.220045.45333HepG2CSTF2
chr2203500511203500555+intron-Proximal4.182493.93614HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM117B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM117B is not available on ENCORE database.

  • 100 RBPs can affect the levels of FAM117B.  








The Knockdown/knockout RNA-Seq assay for FAM117B is not available on ENCORE database.





100 RBPs can affect the gene expression of FAM117B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM117BENSG00000138439.10626.80540997.86760-0.6708012.3103011.22250HepG2ACO1
FAM117BENSG00000138439.10741.589701792.09850-1.2730019.7442018.45730HepG2AKAP1
FAM117BENSG00000138439.10606.70190873.11960-0.525203.868102.64120HepG2AKAP8
FAM117BENSG00000138439.10569.40900819.48440-0.525303.192602.18600HepG2BCCIP
FAM117BENSG00000138439.10473.82050712.08570-0.587704.133003.05390HepG2BCLAF1
FAM117BENSG00000138439.10541.65090748.91060-0.467403.462202.80130HepG2BOP1
FAM117BENSG00000138439.10958.569101306.86360-0.447202.723601.75710HepG2CCAR1
FAM117BENSG00000138439.10718.09710997.58600-0.474307.096606.12250HepG2CKAP4
FAM117BENSG00000138439.10600.20500844.69030-0.493004.273402.91430HepG2CPSF7
FAM117BENSG00000138439.10617.51920857.62740-0.473905.102003.71750HepG2YBX3
FAM117BENSG00000138439.10760.519501268.34200-0.7379014.5443013.29800HepG2CELF1
FAM117BENSG00000138439.10593.99770922.85480-0.6356011.387009.92750HepG2DDX19B
FAM117BENSG00000138439.10579.38640858.83190-0.567906.657504.95820HepG2DDX1
FAM117BENSG00000138439.10419.29290906.10350-1.1117017.6967016.16340HepG2DDX21
FAM117BENSG00000138439.10215.06540753.90450-1.8096022.9928020.00310HepG2DDX27
FAM117BENSG00000138439.10937.261201716.70350-0.8731011.5464010.34800HepG2DDX3X
FAM117BENSG00000138439.10389.06160805.71400-1.0503010.776709.36930HepG2DDX55
FAM117BENSG00000138439.10505.91770876.91940-0.793508.884907.19310HepG2DDX5
FAM117BENSG00000138439.10738.08170954.67210-0.371202.523301.87210HepG2DKC1
FAM117BENSG00000138439.10687.38610842.13700-0.292902.360701.70470HepG2DNAJC21
FAM117BENSG00000138439.10469.97820834.68440-0.8286016.9151015.43720HepG2DNAJC2
FAM117BENSG00000138439.10602.96640819.87340-0.443302.930901.98500HepG2EEF2
FAM117BENSG00000138439.10463.99130683.47970-0.558804.250902.87530HepG2EFTUD2
FAM117BENSG00000138439.10950.479001417.64990-0.576805.448604.63340HepG2EIF2S1
FAM117BENSG00000138439.10490.91770778.08530-0.664407.125505.35470HepG2EIF2S2
FAM117BENSG00000138439.10742.025801566.67970-1.0782014.7323013.28020HepG2EIF4A3
FAM117BENSG00000138439.10738.55250975.03750-0.400803.418302.48840HepG2EWSR1
FAM117BENSG00000138439.10354.44410594.84530-0.747008.354206.30130HepG2FAM120A
FAM117BENSG00000138439.10673.47890863.38130-0.358402.663101.53730HepG2FASTKD2
FAM117BENSG00000138439.10701.871701035.72230-0.561404.098003.17580HepG2FIP1L1
FAM117BENSG00000138439.10469.08180642.89490-0.454703.326402.46890HepG2FUBP3
FAM117BENSG00000138439.10757.085601134.52240-0.583603.815502.50930HepG2FUS
FAM117BENSG00000138439.101281.150901580.68440-0.303101.950901.36570HepG2FXR1
FAM117BENSG00000138439.101046.299501466.33220-0.486903.866203.08480HepG2G3BP1
FAM117BENSG00000138439.10486.15550889.97090-0.872309.408907.49300HepG2GNB2L1
FAM117BENSG00000138439.101023.570001253.41730-0.292303.063702.08600HepG2HNRNPA2B1
FAM117BENSG00000138439.101138.408101484.75760-0.383203.064902.33140HepG2HNRNPK
FAM117BENSG00000138439.10944.071701242.48000-0.396305.974805.01680HepG2HNRNPL
FAM117BENSG00000138439.10406.17410743.80950-0.872808.904807.84640HepG2HNRNPLL
FAM117BENSG00000138439.10480.53410714.59880-0.572505.273604.00650HepG2HNRNPM
FAM117BENSG00000138439.10700.33980939.43830-0.423704.984304.19040HepG2HNRNPU
FAM117BENSG00000138439.10679.37270950.82660-0.485002.956401.68220HepG2HSPD1
FAM117BENSG00000138439.101132.519901490.50020-0.396302.930902.23960HepG2IGF2BP2
FAM117BENSG00000138439.10601.46940959.60600-0.6740012.7227011.27700HepG2ILF2
FAM117BENSG00000138439.10848.948501379.89400-0.700805.965904.73740HepG2LARP4
FAM117BENSG00000138439.101080.255801581.23610-0.549704.994204.12150HepG2MAGOH
FAM117BENSG00000138439.10821.550201590.09090-0.9527011.9285010.68330HepG2MATR3
FAM117BENSG00000138439.10363.69810838.23770-1.2046019.8816017.97360HepG2MSI2
FAM117BENSG00000138439.10891.441801627.55040-0.8685010.904509.68780HepG2NCBP2
FAM117BENSG00000138439.10834.519301352.46090-0.6966012.1629010.61090HepG2NOL12
FAM117BENSG00000138439.10526.99290821.18180-0.639903.304102.32860HepG2PABPC1
FAM117BENSG00000138439.10787.614601449.45780-0.8800011.321709.88860HepG2PABPC4
FAM117BENSG00000138439.10661.26890929.88980-0.491806.237005.04410HepG2PARN
FAM117BENSG00000138439.10867.634501354.58480-0.6427011.6656010.55780HepG2PCBP1
FAM117BENSG00000138439.10687.200301074.01490-0.644204.278403.00480HepG2PCBP2
FAM117BENSG00000138439.10615.28100837.90480-0.445504.644103.71430HepG2PPIL4
FAM117BENSG00000138439.10290.37990621.59500-1.0980011.398909.91940HepG2PRPF8
FAM117BENSG00000138439.10936.348001378.42570-0.557909.100108.22350HepG2PTBP1
FAM117BENSG00000138439.10986.768201291.00070-0.387703.608302.93900HepG2PUF60
FAM117BENSG00000138439.10718.096001370.40560-0.9324023.2460021.86950HepG2PUM1
FAM117BENSG00000138439.10801.960301016.38340-0.341803.892103.18620HepG2PUS1
FAM117BENSG00000138439.101893.055701492.687900.342704.056303.31980HepG2QKI
FAM117BENSG00000138439.10307.332101036.51840-1.7539018.7910017.11120HepG2RAVER1
FAM117BENSG00000138439.101054.479901411.28500-0.420505.261604.60400HepG2RBM22
FAM117BENSG00000138439.101100.266701533.98480-0.479406.961406.17180HepG2NELFE
FAM117BENSG00000138439.10522.16910672.80670-0.365702.428801.78190HepG2RPLP0
FAM117BENSG00000138439.10435.47400647.61640-0.572604.997504.19900HepG2RPS19
FAM117BENSG00000138439.10691.55440969.59640-0.487503.783302.85150HepG2RPS2
FAM117BENSG00000138439.10375.86850614.89120-0.710104.981003.96050HepG2RRP9
FAM117BENSG00000138439.10553.95140836.61450-0.594808.782607.73220HepG2SAFB2
FAM117BENSG00000138439.10372.41420649.97300-0.803507.619406.08280HepG2SERBP1
FAM117BENSG00000138439.10564.638701292.75950-1.1951014.6576013.03570HepG2SF3A3
FAM117BENSG00000138439.10432.31310736.23910-0.768107.713306.58680HepG2SF3B1
FAM117BENSG00000138439.10847.789101434.96670-0.7592016.1775014.92910HepG2SF3B4
FAM117BENSG00000138439.10553.15980975.63920-0.8187018.3239016.89050HepG2SMN1
FAM117BENSG00000138439.10636.307701056.48530-0.731505.848404.41970HepG2SMNDC1
FAM117BENSG00000138439.101389.716001594.02280-0.197901.802801.37220HepG2SRFBP1
FAM117BENSG00000138439.101195.515301497.85670-0.325303.326002.81940HepG2SRSF1
FAM117BENSG00000138439.101030.644001274.61680-0.306503.572902.87820HepG2SRSF5
FAM117BENSG00000138439.101006.310801218.63980-0.276202.263001.75330HepG2SRSF9
FAM117BENSG00000138439.101164.420301384.03850-0.249302.496602.00420HepG2SSB
FAM117BENSG00000138439.10447.12710691.78620-0.629603.892702.44590HepG2STAU1
FAM117BENSG00000138439.10937.517301449.64040-0.6288014.2352013.00430HepG2SUCLG1
FAM117BENSG00000138439.10358.71470912.86000-1.3476029.2724027.96160HepG2TIAL1
FAM117BENSG00000138439.10430.70920920.99860-1.0965025.9246024.41710HepG2TRIM56
FAM117BENSG00000138439.10360.14630528.85450-0.554303.242501.54090HepG2TROVE2
FAM117BENSG00000138439.10978.304001334.88000-0.448403.373502.44940HepG2UBE2L3
FAM117BENSG00000138439.10986.747801146.47890-0.216502.003101.39240HepG2UPF1
FAM117BENSG00000138439.10506.37790734.50920-0.536602.503501.55230HepG2UPF2
FAM117BENSG00000138439.10597.438901106.88210-0.8896019.5570018.18390HepG2UTP3
FAM117BENSG00000138439.10482.08040806.45660-0.7423012.7172011.44820HepG2ZC3H8
FAM117BENSG00000138439.10547.749301260.90890-1.2029042.9107041.42760HepG2ZNF622
FAM117BENSG00000138439.10276.71730199.872700.469202.494201.63050K562ATP5C1
FAM117BENSG00000138439.10195.77240301.31150-0.622103.555102.09190K562CIRBP
FAM117BENSG00000138439.10151.53330247.07220-0.705302.561001.54630K562CNOT7
FAM117BENSG00000138439.1068.75110165.71100-1.269208.187005.92580K562DDX27
FAM117BENSG00000138439.10102.57050182.71940-0.833003.660401.70650K562DDX51
FAM117BENSG00000138439.10272.80200204.976300.412302.077101.32940K562DKC1
FAM117BENSG00000138439.10169.02340248.67990-0.557102.994701.72840K562EIF2S1
FAM117BENSG00000138439.10282.70950181.220700.641503.095401.99860K562EIF3D
FAM117BENSG00000138439.10103.94800186.17520-0.840802.237701.40450K562HNRNPM
FAM117BENSG00000138439.10162.26460306.97790-0.919802.616501.84170K562HSPD1
FAM117BENSG00000138439.10195.46060294.87060-0.593203.609002.54360K562MATR3
FAM117BENSG00000138439.10149.77690256.94880-0.778702.137801.42100K562PPIG
FAM117BENSG00000138439.10264.08770188.908400.483202.060901.57910K562PUS1
FAM117BENSG00000138439.10191.79130275.28210-0.521402.633001.81450K562RBM22
FAM117BENSG00000138439.10138.39180224.26380-0.696404.002103.02940K562SF3A3
FAM117BENSG00000138439.10204.77260281.40350-0.458602.127701.49860K562SRSF1
FAM117BENSG00000138439.10208.89120284.81220-0.447302.005001.39680K562TARDBP
FAM117BENSG00000138439.10192.17420269.55990-0.488202.281601.31150K562TRA2A
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM117B is not available on ENCORE database.






No RBPs affect the alternative splcing events of FAM117B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FAM117B is not avaliable on ENCORE database.