DBF4B

General Information

Gene Name       : DBF4B
Gene ID             : ENSG00000161692.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DBF4B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DBF4BENSG00000161692.179.9714.8112.39ENCSR000AEF
HepG2DBF4BENSG00000161692.1718.8818.2218.55ENCSR985KAT
K562DBF4BENSG00000161692.1719.8017.8918.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DBF4B is not avaliable on ENCORE database.



Proteins bound to RNA
  • DBF4B RNA is bound by 11 proteins.  







eCLIP assay for DBF4B is not avaliable on ENCORE database.





11 proteins are bound to DBF4B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174282739242827546+3'-UTR,intron-Distal3.683814.52780K562HNRNPK
chr174282695542827038+3'-UTR,intron-Distal3.489866.04024K562UPF1
chr174282725942827330+3'-UTR,intron-Distal3.302665.45410K562UPF1
chr174281876042818819+3'-UTR,CDS,intron-Proximal3.607784.51003HepG2PPIG
chr174282750342827562+3'-UTR,intron-Distal5.098866.57498HepG2PCBP2
chr174282444742824564+3'-UTR,CDS,intron-Proximal3.607916.23940HepG2PPIG
chr174282475842824799+3'-UTR,CDS,intron-Proximal4.313734.38106HepG2PPIG
chr174282735542827445+3'-UTR,intron-Distal3.849218.24727K562UPF1
chr174282444942824526+3'-UTR,CDS,intron-Proximal3.729323.66187K562ZNF622
chr174278606042786208+5'-UTR,CDS,intron-Proximal3.166686.35635K562UCHL5
chr174280837442808439+CDS,intron-Proximal4.141266.23016HepG2PRPF8
chr174280834042808406+CDS,intron-Proximal4.047453.83824K562BUD13
chr174278667142786740+CDS,intron-Distal,intron-Proximal3.942894.77136HepG2PPIG
chr174279448242794582+intron-Distal4.644334.40618K562PTBP1
chr174281135642811444+intron-Distal,intron-Proximal3.127683.26275K562BUD13
chr174282781042827856+intron-Distal5.108797.11441K562PUM2
chr174280707942807127+intron-Distal3.275674.48704K562AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DBF4B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DBF4B is not available on ENCORE database.

  • 109 RBPs can affect the levels of DBF4B.  








The Knockdown/knockout RNA-Seq assay for DBF4B is not available on ENCORE database.





109 RBPs can affect the gene expression of DBF4B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DBF4BENSG00000161692.13242.03910357.18580-0.561403.132301.99860HepG2AATF
DBF4BENSG00000161692.13468.07460613.99680-0.391503.555102.88140HepG2ACO1
DBF4BENSG00000161692.13426.65760616.91900-0.532005.598404.54250HepG2AKAP8L
DBF4BENSG00000161692.13178.50120258.54610-0.534502.224501.51610HepG2ASCC1
DBF4BENSG00000161692.13535.97060741.95250-0.469203.260801.74450HepG2ATP5C1
DBF4BENSG00000161692.13399.53700734.53420-0.8785013.8589012.53250HepG2AUH
DBF4BENSG00000161692.13259.33150426.93860-0.719205.011503.83210HepG2BCLAF1
DBF4BENSG00000161692.13290.22430602.44820-1.0537010.433709.36910HepG2BOP1
DBF4BENSG00000161692.13239.53410532.17390-1.1517014.3809012.86120HepG2CALR
DBF4BENSG00000161692.13274.41970613.90840-1.1616022.4671020.97920HepG2CKAP4
DBF4BENSG00000161692.13300.27500553.05810-0.881107.364206.28440HepG2CPSF6
DBF4BENSG00000161692.13421.47800756.20850-0.8433010.107009.02640HepG2CELF1
DBF4BENSG00000161692.13671.63240812.94010-0.275502.164601.49650HepG2DAZAP1
DBF4BENSG00000161692.13466.45340567.87980-0.283902.143701.40240HepG2DDX19B
DBF4BENSG00000161692.13294.73130393.85990-0.418302.147001.54070HepG2DDX21
DBF4BENSG00000161692.13272.84540385.60820-0.499102.945802.00030HepG2DDX24
DBF4BENSG00000161692.13285.74400411.98300-0.527903.225101.83100HepG2DDX47
DBF4BENSG00000161692.13269.41060483.21830-0.842905.335004.30520HepG2DDX55
DBF4BENSG00000161692.13271.34000628.04550-1.210808.584406.91970HepG2DDX59
DBF4BENSG00000161692.13341.42970607.34480-0.830908.145106.50630HepG2DDX5
DBF4BENSG00000161692.13466.01790587.44020-0.334102.392101.75490HepG2DKC1
DBF4BENSG00000161692.13335.57400462.36790-0.462402.455401.58510HepG2EEF2
DBF4BENSG00000161692.13202.92490362.84420-0.838405.189603.67410HepG2AGO1
DBF4BENSG00000161692.13232.58860375.30220-0.690304.270103.16380HepG2EIF3D
DBF4BENSG00000161692.13429.11660273.180200.651403.817503.07170HepG2EIF4A3
DBF4BENSG00000161692.13469.23990802.16150-0.773608.477407.16010HepG2EIF4G1
DBF4BENSG00000161692.13458.32390768.39310-0.745504.002703.03600HepG2EIF4G2
DBF4BENSG00000161692.13485.20330843.34770-0.7975013.2224012.07050HepG2ETF1
DBF4BENSG00000161692.13404.99020600.02460-0.567104.878803.77550HepG2EWSR1
DBF4BENSG00000161692.13248.54080375.43210-0.595103.870902.55010HepG2FASTKD2
DBF4BENSG00000161692.13267.30750402.15880-0.589303.813902.33440HepG2FKBP4
DBF4BENSG00000161692.13653.76320275.598401.2461015.1086013.62840HepG2FXR1
DBF4BENSG00000161692.13322.68890626.87370-0.958008.818607.71910HepG2GPKOW
DBF4BENSG00000161692.13429.13950586.21850-0.450004.369403.15980HepG2HDGF
DBF4BENSG00000161692.13373.49700747.19710-1.0004015.8156013.95460HepG2HNRNPA2B1
DBF4BENSG00000161692.13438.57490258.856600.760605.493204.53440HepG2HNRNPK
DBF4BENSG00000161692.13550.71980740.47480-0.427104.296303.46920HepG2HNRNPL
DBF4BENSG00000161692.13358.17580598.24270-0.740106.150305.25140HepG2HNRNPLL
DBF4BENSG00000161692.13419.82700561.29810-0.419003.909602.70250HepG2KIF1C
DBF4BENSG00000161692.13507.97200778.87030-0.616604.111503.09470HepG2LARP4
DBF4BENSG00000161692.13414.18380275.694500.587103.333202.61270HepG2MAGOH
DBF4BENSG00000161692.13421.84440277.242200.605503.266702.58570HepG2MATR3
DBF4BENSG00000161692.13236.72980392.76100-0.730403.368302.20990HepG2METAP2
DBF4BENSG00000161692.13505.04530671.91820-0.411902.744801.93970HepG2MSI2
DBF4BENSG00000161692.13424.24110564.20610-0.411302.631801.44640HepG2NAA15
DBF4BENSG00000161692.13200.30950405.35410-1.017009.860607.30680HepG2NIP7
DBF4BENSG00000161692.13406.47820530.50060-0.384202.082801.42930HepG2NSUN2
DBF4BENSG00000161692.13347.48220497.65330-0.518204.508303.45710HepG2PARN
DBF4BENSG00000161692.13340.65790260.795200.385302.133001.58820HepG2PCBP1
DBF4BENSG00000161692.13189.48640404.93910-1.095603.859802.63910HepG2PCBP2
DBF4BENSG00000161692.13290.18460430.00540-0.567403.277501.44920HepG2PHF6
DBF4BENSG00000161692.13178.86040372.55040-1.058608.517307.18610HepG2PRPF8
DBF4BENSG00000161692.13427.12660265.369100.686605.309104.60180HepG2PTBP1
DBF4BENSG00000161692.13453.49900769.55800-0.762906.938006.04950HepG2PUF60
DBF4BENSG00000161692.13469.70370816.97480-0.7985010.808109.79790HepG2PUM1
DBF4BENSG00000161692.13629.72530816.34390-0.374502.680602.02020HepG2PUM2
DBF4BENSG00000161692.13446.14190287.400800.634304.934304.13600HepG2QKI
DBF4BENSG00000161692.13176.79670390.58420-1.143504.213503.35260HepG2RAVER1
DBF4BENSG00000161692.13456.21360704.88180-0.627707.111006.37100HepG2RBM22
DBF4BENSG00000161692.13379.50500540.62080-0.510503.642002.49680HepG2RBM27
DBF4BENSG00000161692.13604.80150295.330101.0340014.5379013.48120HepG2NELFE
DBF4BENSG00000161692.13445.45650275.060300.695406.283405.40740HepG2RECQL
DBF4BENSG00000161692.13234.22460590.85370-1.3349018.1442016.69700HepG2RPLP0
DBF4BENSG00000161692.13198.81500384.02220-0.949803.122502.12150HepG2RPS10
DBF4BENSG00000161692.13194.06510365.22370-0.912207.730406.76460HepG2RPS19
DBF4BENSG00000161692.13260.94370498.56830-0.934108.913607.53870HepG2RPS2
DBF4BENSG00000161692.1399.97630368.50850-1.8820018.4898016.79410HepG2RRP9
DBF4BENSG00000161692.13225.13980366.49860-0.703004.479403.29760HepG2SERBP1
DBF4BENSG00000161692.13278.58460592.10700-1.087709.189107.97730HepG2SF3B1
DBF4BENSG00000161692.13452.04190737.99920-0.707205.072504.16830HepG2SLBP
DBF4BENSG00000161692.13231.69230658.83540-1.5077014.4781012.70830HepG2SNRNP70
DBF4BENSG00000161692.13428.89640796.13650-0.8924015.5316014.59780HepG2SRFBP1
DBF4BENSG00000161692.13377.08790288.379900.386802.145901.71440HepG2SRSF1
DBF4BENSG00000161692.13400.69650637.20890-0.669304.309303.03190HepG2SRSF3
DBF4BENSG00000161692.13376.33450759.89240-1.0138010.575909.45810HepG2SRSF5
DBF4BENSG00000161692.13301.40960538.84920-0.8382010.851709.62920HepG2SRSF7
DBF4BENSG00000161692.13504.51060691.23220-0.454304.631004.00110HepG2SSB
DBF4BENSG00000161692.13574.75100864.15050-0.588307.122906.20480HepG2SUCLG1
DBF4BENSG00000161692.13347.71130560.59860-0.689106.241804.86660HepG2SUPT6H
DBF4BENSG00000161692.13155.41010480.97450-1.6299013.2898011.99280HepG2SUPV3L1
DBF4BENSG00000161692.13417.76740259.207600.688505.849305.08580HepG2TAF15
DBF4BENSG00000161692.13275.19400583.26240-1.0837010.506509.22800HepG2TARDBP
DBF4BENSG00000161692.13123.94600322.34260-1.3789010.179308.50780HepG2TFIP11
DBF4BENSG00000161692.13216.68690488.55090-1.1729014.9582013.96000HepG2TIAL1
DBF4BENSG00000161692.13323.54890492.88810-0.607306.244605.45890HepG2TRIM56
DBF4BENSG00000161692.13590.43980751.91550-0.348802.156501.39210HepG2TUFM
DBF4BENSG00000161692.13399.61740710.17870-0.829607.838706.78580HepG2U2AF1
DBF4BENSG00000161692.13522.86960795.94980-0.606203.212602.31080HepG2UBE2L3
DBF4BENSG00000161692.13275.40070554.06130-1.0085015.5584014.15890HepG2UPF1
DBF4BENSG00000161692.13426.47850569.50620-0.417203.410102.26110HepG2UTP18
DBF4BENSG00000161692.13348.21740522.47590-0.585406.095405.15980HepG2ZC3H8
DBF4BENSG00000161692.13250.14750609.36300-1.2845026.7977025.54000HepG2ZNF622
DBF4BENSG00000161692.131205.203501410.42250-0.226902.160201.64820K562AGGF1
DBF4BENSG00000161692.131044.727301467.59650-0.490305.169804.26440K562AKAP8L
DBF4BENSG00000161692.131497.476401114.383400.426203.729003.06800K562AQR
DBF4BENSG00000161692.131287.004001685.57160-0.389204.398102.87060K562CCDC124
DBF4BENSG00000161692.13885.688101195.35480-0.432604.065503.29620K562DDX47
DBF4BENSG00000161692.131155.510201436.77920-0.314303.165702.16310K562EIF4G2
DBF4BENSG00000161692.13212.23610413.51310-0.962306.841105.61810K562G3BP2
DBF4BENSG00000161692.13559.12360765.98150-0.454103.462402.57720K562GPKOW
DBF4BENSG00000161692.131038.23750732.653300.502805.008004.22810K562HNRNPC
DBF4BENSG00000161692.13814.021701005.86760-0.305302.543101.68520K562HNRNPU
DBF4BENSG00000161692.13401.29630654.06760-0.704804.687103.43310K562KRR1
DBF4BENSG00000161692.13998.94660742.979600.427003.070901.51820K562LIN28B
DBF4BENSG00000161692.13939.64880653.190000.524504.980102.85030K562LSM11
DBF4BENSG00000161692.13801.31600646.370000.309902.061501.33090K562MAGOH
DBF4BENSG00000161692.13339.31230581.93450-0.778206.457905.31130K562PRPF8
DBF4BENSG00000161692.131005.69070656.887700.614405.959804.55490K562PSIP1
DBF4BENSG00000161692.131277.954101567.62570-0.294702.102201.39030K562PUF60
DBF4BENSG00000161692.131157.808601418.13230-0.292602.761002.16840K562RBM15
DBF4BENSG00000161692.13758.02230601.976800.332402.116001.38550K562RBM22
DBF4BENSG00000161692.13852.43860599.263300.508304.890003.57140K562RCC2
DBF4BENSG00000161692.13383.70570592.79050-0.627503.998503.01350K562RPS19
DBF4BENSG00000161692.13882.00870568.092000.634606.333004.60450K562SRFBP1
DBF4BENSG00000161692.131259.879001071.721600.233302.334301.46550K562SRPK2
DBF4BENSG00000161692.13834.88600601.022400.474104.370503.30400K562TIA1
DBF4BENSG00000161692.13825.34220590.010500.484203.326902.10910K562TRA2A
DBF4BENSG00000161692.13869.25560671.162100.373002.599901.68930K562TRIM56
DBF4BENSG00000161692.13245.80500413.82060-0.751506.688405.44730K562U2AF2
DBF4BENSG00000161692.131304.222501124.056800.214402.003901.38570K562UPF1
DBF4BENSG00000161692.13935.192901267.19760-0.438303.140901.85460K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DBF4B is not available on ENCORE database.





9 RBPs can affect the splicing of DBF4B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDBF4BENSG00000161692.13chr17+4280954542809633428083324280838342811457428115310.445000.000380.09540includedK562IGF2BP2
SEDBF4BENSG00000161692.13chr17+4280954542809633428083324280838342811457428115310.334000.000370.07529includedK562WDR3
SEDBF4BENSG00000161692.13chr17+428095454280963342808332428083834281145742811531-0.463000.006150.08895excludedHepG2U2AF1
SEDBF4BENSG00000161692.13chr17+428095454280963342808332428083834281145742811531-0.342000.004800.05142excludedHepG2U2AF2
SEDBF4BENSG00000161692.13chr17+427866714278673442786065427862074280024742800390-0.153000.007650.06574excludedK562AQR
SEDBF4BENSG00000161692.13chr17+428095454280963342808332428083834281145742811531-0.579000.000040.00167excludedHepG2SRSF1
SEDBF4BENSG00000161692.13chr17+427866714278673442786050427862074280024742800390-0.338000.000060.00398excludedK562HNRNPU
SEDBF4BENSG00000161692.13chr17+427866714278673442786050427862074280024742800289-0.263000.000620.01897excludedK562AGGF1
SEDBF4BENSG00000161692.13chr17+428095454280963342808332428083834281145742811531-0.300000.001680.02941excludedK562HNRNPC
A3SSDBF4BENSG00000161692.13chr17+4280724942807464428072724280746442800247428003900.127000.000160.00132longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DBF4B is not avaliable on ENCORE database.