CDR2L

General Information

Gene Name       : CDR2L
Gene ID             : ENSG00000109089.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CDR2L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CDR2LENSG00000109089.70.000.010.01ENCSR000AEF
HepG2CDR2LENSG00000109089.74.022.183.10ENCSR985KAT
K562CDR2LENSG00000109089.76.404.895.64ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CDR2L is not avaliable on ENCORE database.



Proteins bound to RNA
  • CDR2L RNA is bound by 1 proteins.  







eCLIP assay for CDR2L is not avaliable on ENCORE database.





1 proteins are bound to CDR2L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177300054373000603+3'-UTR5.1605415.33760K562UPF1
chr177300130873001389+3'-UTR4.903485.60103K562UPF1
chr177300171473001797+3'-UTR5.340718.40676K562UPF1
chr177300156373001612+3'-UTR4.600464.90799K562UPF1
chr177300075573000877+3'-UTR5.502629.20661K562UPF1
chr177300065773000701+3'-UTR3.634143.66308K562UPF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CDR2L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CDR2L is not available on ENCORE database.

  • 117 RBPs can affect the levels of CDR2L.  








The Knockdown/knockout RNA-Seq assay for CDR2L is not available on ENCORE database.





117 RBPs can affect the gene expression of CDR2L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CDR2LENSG00000109089.7372.75480169.845101.133908.229407.29430HepG2ACO1
CDR2LENSG00000109089.7104.30240167.56560-0.684002.712301.72340HepG2ADAR
CDR2LENSG00000109089.7302.1357067.958702.1524018.1325016.89750HepG2AKAP1
CDR2LENSG00000109089.7193.75240106.850300.858503.937102.69920HepG2AKAP8
CDR2LENSG00000109089.7136.56940215.50630-0.658103.080701.59850HepG2ATP5C1
CDR2LENSG00000109089.7387.97860248.483900.642705.555004.63990HepG2AUH
CDR2LENSG00000109089.7113.93610244.63420-1.102407.199206.28690HepG2BOP1
CDR2LENSG00000109089.7510.29200282.928900.850805.860204.41800HepG2CCAR1
CDR2LENSG00000109089.785.54340169.80240-0.989105.804404.90490HepG2CKAP4
CDR2LENSG00000109089.7140.14750224.58110-0.680303.011302.29770HepG2CPSF6
CDR2LENSG00000109089.753.50930102.76740-0.941503.210302.05660HepG2CSTF2
CDR2LENSG00000109089.7107.92340194.05610-0.846504.984104.03140HepG2DAZAP1
CDR2LENSG00000109089.756.90670101.10650-0.829202.553201.67870HepG2DDX24
CDR2LENSG00000109089.7170.6062065.089201.390107.044706.08800HepG2DDX3X
CDR2LENSG00000109089.7130.10530236.05550-0.859404.507102.87610HepG2DDX47
CDR2LENSG00000109089.7308.05470163.642000.912504.445203.48810HepG2DDX55
CDR2LENSG00000109089.788.95910167.65400-0.914302.833701.81040HepG2DDX5
CDR2LENSG00000109089.7372.8523055.936802.7366011.8133010.64380HepG2DDX6
CDR2LENSG00000109089.763.33210162.74700-1.361607.819106.25280HepG2DHX30
CDR2LENSG00000109089.759.58610162.49430-1.447308.845507.77180HepG2DKC1
CDR2LENSG00000109089.797.1961053.749700.854501.878301.37890HepG2EIF2S1
CDR2LENSG00000109089.7182.50300107.629400.761702.370401.52790HepG2EIF3D
CDR2LENSG00000109089.7249.1674057.844702.1068014.7844013.26890HepG2EIF4B
CDR2LENSG00000109089.7109.22170191.45000-0.809704.325203.32240HepG2EIF4G1
CDR2LENSG00000109089.7125.04370183.39650-0.552502.023501.31940HepG2EIF4G2
CDR2LENSG00000109089.792.94230206.93160-1.154707.145205.49250HepG2ESF1
CDR2LENSG00000109089.7191.35040285.28620-0.576203.210502.57100HepG2ETF1
CDR2LENSG00000109089.7293.77340165.963900.823705.703504.50040HepG2EWSR1
CDR2LENSG00000109089.7643.27700241.255701.4148014.8864013.33580HepG2FIP1L1
CDR2LENSG00000109089.779.62720136.19330-0.774302.788701.51300HepG2FKBP4
CDR2LENSG00000109089.7261.9038059.955002.1270018.9183017.28780HepG2FXR1
CDR2LENSG00000109089.7194.0477095.819901.017905.046103.83340HepG2GEMIN5
CDR2LENSG00000109089.7198.59660106.272400.902003.812102.61200HepG2GNB2L1
CDR2LENSG00000109089.784.67790170.36210-1.008504.409203.61880HepG2HNRNPA1
CDR2LENSG00000109089.798.29220189.48460-0.946904.418003.55610HepG2HNRNPC
CDR2LENSG00000109089.7174.76430355.61300-1.024908.225007.07120HepG2HNRNPF
CDR2LENSG00000109089.7141.7683056.341401.331205.781704.80060HepG2HNRNPK
CDR2LENSG00000109089.740.24490242.93540-2.5937023.0661021.53100HepG2HNRNPLL
CDR2LENSG00000109089.7287.76470166.410100.790004.892303.67020HepG2HNRNPM
CDR2LENSG00000109089.7114.32660188.23270-0.719403.335202.67490HepG2HNRNPU
CDR2LENSG00000109089.7266.64400116.352201.196307.330205.37510HepG2HSPD1
CDR2LENSG00000109089.7145.42270350.18370-1.2679011.4085010.03650HepG2IGF2BP1
CDR2LENSG00000109089.7172.2182056.508501.607609.288408.13290HepG2IGF2BP2
CDR2LENSG00000109089.7230.7234053.056902.120502.908001.90030HepG2IGF2BP3
CDR2LENSG00000109089.785.56850155.25620-0.859504.378403.10690HepG2KIF1C
CDR2LENSG00000109089.7184.74490104.169500.826503.291202.05440HepG2LARP7
CDR2LENSG00000109089.7318.8634060.306102.4025023.5699021.87660HepG2MATR3
CDR2LENSG00000109089.7250.37470112.619601.152504.922503.54450HepG2METAP2
CDR2LENSG00000109089.761.75990247.80090-2.0044012.7141010.61910HepG2MTPAP
CDR2LENSG00000109089.7113.2437061.722100.875502.193701.62760HepG2NCBP2
CDR2LENSG00000109089.7287.23170192.425700.577803.417602.57130HepG2NOL12
CDR2LENSG00000109089.737.64230215.42150-2.5167018.7371017.00560HepG2NSUN2
CDR2LENSG00000109089.7126.8625046.465201.448907.486306.56660HepG2PCBP1
CDR2LENSG00000109089.793.90050161.51740-0.782503.505201.55350HepG2PES1
CDR2LENSG00000109089.778.91430167.89060-1.089206.267205.19110HepG2PPIL4
CDR2LENSG00000109089.745.15700166.01110-1.8783014.0149012.48070HepG2PRPF4
CDR2LENSG00000109089.7235.9156047.281502.3188024.3661023.05010HepG2PTBP1
CDR2LENSG00000109089.7325.54710194.850500.740405.165404.26220HepG2PUM2
CDR2LENSG00000109089.7111.80520172.99740-0.629802.935102.30540HepG2PUS1
CDR2LENSG00000109089.7188.3818098.873300.929902.976002.24640HepG2RAVER1
CDR2LENSG00000109089.71121.64840238.447802.2338077.7352075.74450HepG2RBM22
CDR2LENSG00000109089.7306.6867052.618602.5430031.1611029.76370HepG2NELFE
CDR2LENSG00000109089.7142.4508049.009101.539208.288007.30580HepG2RECQL
CDR2LENSG00000109089.7283.34340382.98670-0.434701.913001.33310HepG2RPLP0
CDR2LENSG00000109089.7306.35700104.762201.5480013.9906012.74720HepG2RPS19
CDR2LENSG00000109089.7208.31340115.839400.846503.129702.27820HepG2RPS2
CDR2LENSG00000109089.7210.68080118.264600.832903.380202.19010HepG2RPS5
CDR2LENSG00000109089.784.77610167.63650-0.983605.457404.60570HepG2SAFB2
CDR2LENSG00000109089.749.01600118.28720-1.271003.803401.98870HepG2SBDS
CDR2LENSG00000109089.7251.39050118.232301.088204.519303.64700HepG2SF3A3
CDR2LENSG00000109089.768.74730240.44800-1.8063014.4280012.95210HepG2SF3B1
CDR2LENSG00000109089.7143.2022049.223601.540508.218507.28290HepG2SF3B4
CDR2LENSG00000109089.7214.1747081.038801.402003.625301.90550HepG2SFPQ
CDR2LENSG00000109089.779.81620176.12930-1.141906.929705.90110HepG2SLBP
CDR2LENSG00000109089.7348.94780195.504200.835708.098507.08990HepG2SMN1
CDR2LENSG00000109089.7223.66050101.265601.143103.849202.70530HepG2SMNDC1
CDR2LENSG00000109089.748.34340267.54420-2.4684019.0607017.05550HepG2SNRNP70
CDR2LENSG00000109089.7474.91670269.320500.818309.161308.39530HepG2SRFBP1
CDR2LENSG00000109089.7146.7735051.379801.514208.112907.40170HepG2SRSF1
CDR2LENSG00000109089.7147.67140349.35600-1.242309.180208.04190HepG2SRSF7
CDR2LENSG00000109089.7111.9065041.801101.420606.941906.13920HepG2SRSF9
CDR2LENSG00000109089.755.83310233.83820-2.0663021.2299020.10120HepG2SSB
CDR2LENSG00000109089.780.53680161.07590-1.000004.288602.77910HepG2STAU1
CDR2LENSG00000109089.7376.36610206.262100.867608.634107.63670HepG2SUCLG1
CDR2LENSG00000109089.7263.37130162.884900.693102.458001.81560HepG2SUPV3L1
CDR2LENSG00000109089.793.04350236.83330-1.347909.324708.10920HepG2TARDBP
CDR2LENSG00000109089.7129.08640182.94740-0.503101.947701.51270HepG2TIAL1
CDR2LENSG00000109089.7141.81530206.33690-0.541002.014701.46960HepG2U2AF1
CDR2LENSG00000109089.7335.55350189.952300.820803.823502.83350HepG2UBE2L3
CDR2LENSG00000109089.7210.12870101.231901.053504.416903.68890HepG2UTP3
CDR2LENSG00000109089.757.89690111.61350-0.947002.705401.62420HepG2XPO5
CDR2LENSG00000109089.7260.11170108.816501.257105.807804.30240HepG2XRCC6
CDR2LENSG00000109089.760.10880160.34280-1.415507.358206.19000HepG2XRN2
CDR2LENSG00000109089.7538.47570395.094400.446603.573702.94290K562AGGF1
CDR2LENSG00000109089.7627.82340388.070400.693906.215405.39610K562AQR
CDR2LENSG00000109089.7337.86180238.008800.505303.061202.05500K562BCLAF1
CDR2LENSG00000109089.7364.79730223.708400.705404.931903.42940K562CCAR1
CDR2LENSG00000109089.7559.42000363.911900.620203.573101.90050K562CKAP4
CDR2LENSG00000109089.7479.05950265.877700.849304.543603.13980K562CNOT7
CDR2LENSG00000109089.7609.32570448.280900.442703.561102.29850K562CPEB4
CDR2LENSG00000109089.7306.06290173.180400.821504.839903.80660K562CPSF6
CDR2LENSG00000109089.7507.95210638.90610-0.330902.411201.50230K562CELF1
CDR2LENSG00000109089.7471.87730256.065700.881806.324204.67280K562DDX3X
CDR2LENSG00000109089.7742.73240463.790200.679309.167508.06530K562DDX47
CDR2LENSG00000109089.7184.96300324.17300-0.809506.521405.48600K562EIF2S2
CDR2LENSG00000109089.7191.95240118.956600.690203.192702.33970K562EIF3G
CDR2LENSG00000109089.7419.14100267.522200.647704.579703.52430K562EIF4A3
CDR2LENSG00000109089.7678.76420519.505300.385702.540501.63560K562EIF4G2
CDR2LENSG00000109089.7120.34190213.82670-0.829303.457802.17770K562FKBP4
CDR2LENSG00000109089.7261.97120176.252700.571702.592401.76580K562FMR1
CDR2LENSG00000109089.732.15140102.76910-1.676506.655305.45610K562G3BP2
CDR2LENSG00000109089.7328.71040206.278400.672103.495001.86620K562GEMIN5
CDR2LENSG00000109089.7349.18520165.325801.078605.281804.19240K562GPKOW
CDR2LENSG00000109089.7649.76340431.926000.589004.644403.66580K562GRSF1
CDR2LENSG00000109089.7270.37100161.246700.745603.614602.38180K562IGF2BP2
CDR2LENSG00000109089.7359.65780238.458700.592803.712602.04920K562LARP7
CDR2LENSG00000109089.7341.92900169.278301.014208.516307.00140K562MAGOH
CDR2LENSG00000109089.7262.65680168.906600.636903.671402.59580K562MATR3
CDR2LENSG00000109089.7321.12410161.384400.992507.669706.17560K562METAP2
CDR2LENSG00000109089.7590.95090436.266600.437704.351303.43830K562NSUN2
CDR2LENSG00000109089.7401.97120255.432000.654102.701301.48180K562PABPC1
CDR2LENSG00000109089.7523.87740327.037800.679704.217103.17520K562PPIG
CDR2LENSG00000109089.7365.92260220.670000.729504.469903.27550K562PSIP1
CDR2LENSG00000109089.7253.00970164.478300.621201.992801.41280K562PTBP1
CDR2LENSG00000109089.7559.13650397.253900.493004.034303.33470K562RBM15
CDR2LENSG00000109089.7265.24710157.613600.750804.594703.47970K562RBM22
CDR2LENSG00000109089.7449.06180203.879501.139109.196407.69340K562RPS19
CDR2LENSG00000109089.7323.96820182.769800.825703.011901.96240K562RPS3
CDR2LENSG00000109089.7451.81110242.211100.899405.077902.90120K562SBDS
CDR2LENSG00000109089.7495.55670268.635300.883303.661602.07430K562SFPQ
CDR2LENSG00000109089.7347.82830190.911200.865406.206004.50080K562SRFBP1
CDR2LENSG00000109089.7289.11860161.264400.842105.709104.70020K562SRSF1
CDR2LENSG00000109089.7339.34590176.383100.943906.722404.95990K562SRSF4
CDR2LENSG00000109089.7224.17480152.353700.557102.409601.43970K562SRSF5
CDR2LENSG00000109089.7253.48030163.165200.635403.238002.47300K562TARDBP
CDR2LENSG00000109089.7236.36810157.403100.586502.866002.03050K562TIA1
CDR2LENSG00000109089.7351.77370212.240000.728904.414503.21300K562TIAL1
CDR2LENSG00000109089.7330.37480225.547800.550602.971501.98380K562TRIM56
CDR2LENSG00000109089.757.09430102.80640-0.848502.884702.06470K562U2AF2
CDR2LENSG00000109089.7323.22270208.939200.629303.279501.92720K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CDR2L is not available on ENCORE database.






No RBPs affect the alternative splcing events of CDR2L on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CDR2L is not avaliable on ENCORE database.