CASC10

General Information

Gene Name       : CASC10
Gene ID             : ENSG00000204682.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CASC10)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CASC10ENSG00000204682.50.000.020.01ENCSR000AEF
HepG2CASC10ENSG00000204682.53.132.602.87ENCSR985KAT
K562CASC10ENSG00000204682.50.380.190.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CASC10 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CASC10 RNA is bound by 12 proteins.  







eCLIP assay for CASC10 is not avaliable on ENCORE database.





12 proteins are bound to CASC10 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr102178381121783883-3'-UTR,intron-Distal4.253448.06348HepG2CSTF2T
chr102178334421783414-3'-UTR,intron-Distal4.047444.27913HepG2CSTF2
chr102178580221785836-5'-UTR,intron-Distal4.296214.69912HepG2DGCR8
chr102178599021786045-5'-UTR,intron-Distal3.737184.16791HepG2NKRF
chr102178599821786035-5'-UTR,intron-Distal4.409523.88813HepG2DGCR8
chr102178590421785975-5'-UTR,intron-Distal3.936754.82666HepG2DDX3X
chr102178598821786101-5'-UTR,intron-Distal3.559695.08370HepG2DDX3X
chr102178597921786025-5'-UTR,intron-Distal3.997454.48686HepG2DROSHA
chr102178598021786090-5'-UTR,intron-Distal4.457749.70932HepG2PRPF4
chr102178615021786171-5'-UTR,intron-Distal4.014083.19526HepG2CSTF2T
chr102178597321786077-5'-UTR,intron-Distal3.335967.51540HepG2FASTKD2
chr102178482321784887-CDS,intron-Distal3.170686.20207HepG2CSTF2T
chr102178559721785653-intron-Distal3.737245.80394HepG2DROSHA
chr102178552821785555-intron-Distal5.5322510.33133HepG2DGCR8
chr102178498221785058-intron-Distal3.302297.37002HepG2FAM120A
chr102178511821785186-intron-Distal4.419628.03149HepG2DGCR8
chr102178497921785037-intron-Distal4.471894.42691HepG2GTF2F1
chr102178556221785657-intron-Distal5.6527512.55740HepG2DGCR8
chr102178497321785035-intron-Distal3.716267.78950HepG2DGCR8
chr102178512021785182-intron-Distal3.508477.12647HepG2FASTKD2
chr102178526921785355-intron-Distal4.112187.53498HepG2PRPF4
chr102178498621785052-intron-Distal4.2540011.16670HepG2CSTF2T
chr102178550021785527-intron-Distal7.5978138.55749HepG2DGCR8
chr102178497121785000-intron-Distal3.334513.36018HepG2FASTKD2
chr102178511021785202-intron-Distal4.7516013.84097HepG2PRPF4
chr102178509721785182-intron-Distal4.830334.07878HepG2SLTM
chr102178557321785676-intron-Distal3.493587.70534HepG2PRPF4
chr102178536321785429-intron-Distal3.532483.87101HepG2NKRF
chr102178497421785037-intron-Distal3.818596.02286HepG2PRPF4
chr102178547421785522-intron-Distal4.141006.85787HepG2CSTF2T
chr102178496021785018-intron-Distal3.606807.53958HepG2DROSHA
chr102178510721785197-intron-Distal3.934319.67230HepG2CSTF2T
chr102178511821785189-intron-Distal3.716294.74378HepG2GTF2F1
chr102178509521785186-intron-Distal4.024608.87615HepG2DROSHA
chr102178513421785223-intron-Distal3.345823.76326HepG2RBFOX2
chr102178549721785559-intron-Distal5.102845.67221K562DGCR8
chr102178555621785597-intron-Distal3.396635.57617HepG2DROSHA
chr102178511521785199-intron-Distal3.712259.05806HepG2FAM120A
chr102178523921785328-intron-Distal3.212083.27165HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CASC10 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CASC10 is not available on ENCORE database.

  • 111 RBPs can affect the levels of CASC10.  








The Knockdown/knockout RNA-Seq assay for CASC10 is not available on ENCORE database.





111 RBPs can affect the gene expression of CASC10 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CASC10ENSG00000204682.550.15100133.56530-1.413206.484104.91210HepG2AATF
CASC10ENSG00000204682.5709.74750270.216901.3931017.4909015.50640HepG2ABCF1
CASC10ENSG00000204682.5110.13160207.98210-0.917206.126305.29340HepG2ACO1
CASC10ENSG00000204682.5103.73580411.15840-1.9868020.9772019.65560HepG2AKAP1
CASC10ENSG00000204682.5136.64220213.41550-0.643302.731301.69900HepG2AKAP8
CASC10ENSG00000204682.5210.5372071.128801.565506.988104.11170HepG2APOBEC3C
CASC10ENSG00000204682.5162.24110256.85430-0.662804.005703.20880HepG2AUH
CASC10ENSG00000204682.5161.62820102.246600.660502.161901.36480HepG2BCLAF1
CASC10ENSG00000204682.5321.94580140.635201.194807.617506.68440HepG2BOP1
CASC10ENSG00000204682.5601.71500323.217600.896508.472307.17670HepG2CIRBP
CASC10ENSG00000204682.5391.51280207.895300.9131010.276909.16250HepG2CKAP4
CASC10ENSG00000204682.536.8672076.17310-1.046902.349301.64810HepG2CNOT7
CASC10ENSG00000204682.5296.39240129.097101.199008.003106.88570HepG2CPSF6
CASC10ENSG00000204682.5153.6532072.682201.079904.969803.58430HepG2CSTF2
CASC10ENSG00000204682.569.45970164.75550-1.246107.304306.35370HepG2CELF1
CASC10ENSG00000204682.5206.76430147.146500.490601.893501.31970HepG2DDX21
CASC10ENSG00000204682.5221.72020144.173600.620802.933201.98890HepG2DDX24
CASC10ENSG00000204682.541.34320115.69960-1.484705.529104.48050HepG2DDX55
CASC10ENSG00000204682.5505.09730243.851701.0505010.906709.05850HepG2DDX5
CASC10ENSG00000204682.5109.24040338.30680-1.6308013.9647012.71200HepG2DDX6
CASC10ENSG00000204682.5194.4798079.103301.297703.067402.03970HepG2DHX30
CASC10ENSG00000204682.5694.59670198.971801.8035042.1751040.35430HepG2DKC1
CASC10ENSG00000204682.5153.6887082.012300.906004.395003.52440HepG2DNAJC21
CASC10ENSG00000204682.5248.97720126.242200.979705.274604.03740HepG2EEF2
CASC10ENSG00000204682.5163.09060325.26300-0.995906.605705.71330HepG2EIF2S1
CASC10ENSG00000204682.5320.62470139.075801.2049011.286409.40660HepG2EIF3G
CASC10ENSG00000204682.5665.31900359.473400.888107.884506.80740HepG2EIF4A3
CASC10ENSG00000204682.5245.63680349.96050-0.510701.947801.36370HepG2EIF4B
CASC10ENSG00000204682.5468.57960174.772001.4227021.5810019.71500HepG2EIF4G1
CASC10ENSG00000204682.5359.56650167.420401.102709.612308.13370HepG2EIF4G2
CASC10ENSG00000204682.5454.73750234.142500.957508.782607.00680HepG2ESF1
CASC10ENSG00000204682.5498.69830294.912500.757807.783106.86240HepG2ETF1
CASC10ENSG00000204682.587.38650272.87560-1.6428011.067009.67570HepG2FIP1L1
CASC10ENSG00000204682.5187.9352096.300800.964504.143302.61220HepG2FKBP4
CASC10ENSG00000204682.5267.70610165.736800.691703.365201.53680HepG2FMR1
CASC10ENSG00000204682.5510.27200129.346701.9799012.6487010.53730HepG2FTO
CASC10ENSG00000204682.546.29500152.13990-1.716509.044507.16230HepG2FUS
CASC10ENSG00000204682.5240.08870362.63440-0.594903.142802.40600HepG2FXR1
CASC10ENSG00000204682.5672.66930357.120400.913409.261107.62270HepG2G3BP2
CASC10ENSG00000204682.5154.7852091.265500.762002.227101.42990HepG2GEMIN5
CASC10ENSG00000204682.5165.9259082.798101.002804.455403.66050HepG2HNRNPA1
CASC10ENSG00000204682.5351.79510128.258601.4556018.8036017.15450HepG2HNRNPF
CASC10ENSG00000204682.5210.64690340.59080-0.693203.995303.17010HepG2HNRNPK
CASC10ENSG00000204682.5407.65760139.624301.5457012.9711011.73960HepG2HNRNPLL
CASC10ENSG00000204682.590.81870188.33170-1.052205.501504.20890HepG2HNRNPM
CASC10ENSG00000204682.5184.0187091.491901.008006.254105.37300HepG2HNRNPU
CASC10ENSG00000204682.5521.93830126.297802.0470038.4208036.21580HepG2IGF2BP1
CASC10ENSG00000204682.5681.89190341.982500.9955010.649809.41830HepG2IGF2BP2
CASC10ENSG00000204682.585.14110320.89120-1.914209.038607.34080HepG2IGF2BP3
CASC10ENSG00000204682.5541.43250343.955200.654503.790302.59740HepG2KHSRP
CASC10ENSG00000204682.5286.49610190.095900.591704.067802.83890HepG2KIF1C
CASC10ENSG00000204682.5292.74240204.555900.517002.072601.36170HepG2LARP4
CASC10ENSG00000204682.542.53220107.28450-1.334803.256602.11550HepG2METAP2
CASC10ENSG00000204682.5135.67380220.94170-0.703503.019702.17490HepG2MSI2
CASC10ENSG00000204682.5322.21010142.480201.177105.976004.52560HepG2MTPAP
CASC10ENSG00000204682.5252.13020373.40160-0.566602.876502.23160HepG2NCBP2
CASC10ENSG00000204682.5195.94590111.708300.810603.722502.06160HepG2NIP7
CASC10ENSG00000204682.5453.25980292.848800.630102.970401.46600HepG2NOLC1
CASC10ENSG00000204682.5717.54700123.830702.5346051.6796049.22390HepG2NSUN2
CASC10ENSG00000204682.527.8973069.60830-1.319103.284302.31230HepG2PABPC1
CASC10ENSG00000204682.554.1637090.55690-0.741502.081301.33840HepG2PARN
CASC10ENSG00000204682.5229.79870377.06320-0.714406.376205.51400HepG2PCBP1
CASC10ENSG00000204682.5360.66710144.009301.3244010.240008.41570HepG2PCBP2
CASC10ENSG00000204682.5153.5518081.602900.911904.562003.63810HepG2PPIL4
CASC10ENSG00000204682.5353.73950208.334600.763706.478105.34970HepG2PRPF4
CASC10ENSG00000204682.5155.5778089.244800.801702.762201.95400HepG2PRPF8
CASC10ENSG00000204682.5184.23560383.65310-1.0583012.1628011.17710HepG2PTBP1
CASC10ENSG00000204682.5486.24580167.687101.5358021.3101019.86630HepG2PUF60
CASC10ENSG00000204682.5129.70580178.00710-0.456701.834001.32980HepG2PUM1
CASC10ENSG00000204682.5107.93530177.87720-0.720703.122302.41070HepG2PUM2
CASC10ENSG00000204682.5282.14760211.837200.413402.197101.63290HepG2PUS1
CASC10ENSG00000204682.5240.23070415.55430-0.790606.986906.05970HepG2QKI
CASC10ENSG00000204682.571.62950138.93270-0.955802.740302.03840HepG2RAVER1
CASC10ENSG00000204682.5509.65240279.875900.864603.360501.45130HepG2RBM14
CASC10ENSG00000204682.5180.90060272.84850-0.592903.458602.50880HepG2RBM15
CASC10ENSG00000204682.575.36990246.49030-1.7095015.7094014.68080HepG2RBM22
CASC10ENSG00000204682.5164.98560377.12390-1.1927012.1424010.79180HepG2RBM25
CASC10ENSG00000204682.5207.58040120.987400.778702.648201.61300HepG2RCC2
CASC10ENSG00000204682.5995.88070138.170702.8494023.2225021.64200HepG2RPLP0
CASC10ENSG00000204682.5452.60370136.546701.7288016.9568014.86490HepG2RPS10
CASC10ENSG00000204682.5565.6155076.446602.8872043.1519040.23510HepG2RPS3A
CASC10ENSG00000204682.5121.6838081.475500.578601.900401.34990HepG2SAFB2
CASC10ENSG00000204682.5318.46060469.63540-0.560402.738702.06840HepG2SF3A3
CASC10ENSG00000204682.5351.75130138.179001.347905.635404.65700HepG2SF3B1
CASC10ENSG00000204682.5395.31260160.785501.2978018.0273016.53070HepG2SLBP
CASC10ENSG00000204682.567.87710141.87160-1.063604.472603.23440HepG2SMNDC1
CASC10ENSG00000204682.5146.81170278.39830-0.923206.892306.20040HepG2SRFBP1
CASC10ENSG00000204682.5187.78810416.94690-1.1508013.6828012.80310HepG2SRSF1
CASC10ENSG00000204682.5227.58840165.566400.458902.119101.56270HepG2SRSF5
CASC10ENSG00000204682.5282.00550126.010901.1621011.080909.84970HepG2SRSF7
CASC10ENSG00000204682.5206.12910339.19420-0.718606.241605.47200HepG2SRSF9
CASC10ENSG00000204682.5987.35360241.709602.0302072.3946070.67850HepG2SSB
CASC10ENSG00000204682.5274.54190182.348900.590202.634001.42350HepG2STAU1
CASC10ENSG00000204682.5127.75100188.29470-0.559702.487101.89150HepG2SUCLG1
CASC10ENSG00000204682.5374.40940115.174801.7007014.5548013.21450HepG2SUPV3L1
CASC10ENSG00000204682.5131.73150374.72190-1.5082019.2922018.00320HepG2TAF15
CASC10ENSG00000204682.5235.70980136.189300.791302.422401.73740HepG2TARDBP
CASC10ENSG00000204682.5367.47380227.412200.692202.374301.38620HepG2TBRG4
CASC10ENSG00000204682.5156.99300344.36740-1.1332011.278009.62510HepG2TIA1
CASC10ENSG00000204682.5348.7290088.888301.9719026.3184025.07020HepG2TIAL1
CASC10ENSG00000204682.5141.25440233.48090-0.725002.975902.32530HepG2U2AF1
CASC10ENSG00000204682.529.3926068.03570-1.210803.228702.41020HepG2UCHL5
CASC10ENSG00000204682.5238.38760105.458701.176505.565604.10490HepG2UPF2
CASC10ENSG00000204682.5275.03620402.10940-0.548004.049603.34490HepG2UTP3
CASC10ENSG00000204682.5131.3511068.471000.939803.457302.22110HepG2XPO5
CASC10ENSG00000204682.5433.74710113.377101.9356021.0149019.10270HepG2XRN2
CASC10ENSG00000204682.5519.20370205.607501.3363023.1645021.55980HepG2ZC3H8
CASC10ENSG00000204682.5186.65500458.06460-1.2952021.2662020.09880HepG2ZNF622
CASC10ENSG00000204682.559.2146015.193501.962405.714004.73600K562EIF2S2
CASC10ENSG00000204682.557.4382017.840301.686803.952603.00570K562HSPD1
CASC10ENSG00000204682.54.9331028.58730-2.534802.545302.01960K562PUS1
CASC10ENSG00000204682.58.1030027.83560-1.780402.054301.52920K562RBM15
CASC10ENSG00000204682.537.042105.966402.634102.534501.75440K562RPS19
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CASC10 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CASC10 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CASC10 is not avaliable on ENCORE database.