C17orf70

General Information

Gene Name       : C17orf70
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C17orf70)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C17orf70 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C17orf70 RNA is bound by 11 proteins.  







eCLIP assay for C17orf70 is not avaliable on ENCORE database.





11 proteins are bound to C17orf70 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177950748579507622-3'-UTR,intron-Distal3.352493.05408HepG2UPF1
chr177951287479512970-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.281215.58150K562SF3B4
chr177951290179512983-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.626015.23533HepG2SF3B4
chr177951286479512937-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.9874217.02742K562AQR
chr177950770279507772-3'-UTR,intron-Distal3.335653.46580HepG2CSTF2T
chr177950771379507743-3'-UTR,intron-Distal5.515489.35180K562EXOSC5
chr177951806479518124-3'-UTR,5'-UTR,CDS,intron-Distal4.325373.48187K562RBM15
chr177950736979507429-3'-UTR,intron-Distal3.837126.75450K562NONO
chr177951806279518116-3'-UTR,5'-UTR,CDS,intron-Distal4.928715.86613HepG2PPIG
chr177951617979516235-5'-UTR,CDS,intron-Distal,intron-Proximal4.3537711.94131HepG2PRPF8
chr177951800679518056-5'-UTR,CDS,intron-Distal4.784143.81597K562RBM15
chr177951921279519258-5'-UTR,CDS,intron-Distal5.306115.39850K562DDX3X
chr177951465079514697-5'-UTR,CDS,intron-Distal3.429358.17562K562AQR
chr177951727179517306-5'-UTR,CDS,intron-Distal,intron-Proximal4.186455.52342HepG2PPIG
chr177951628379516389-5'-UTR,CDS,intron-Distal,intron-Proximal3.358098.52066HepG2PPIG
chr177951924379519330-5'-UTR,CDS,intron-Distal6.367058.23278HepG2DDX3X
chr177951618879516243-5'-UTR,CDS,intron-Distal,intron-Proximal4.646426.08664K562BUD13
chr177951469779514799-5'-UTR,CDS,intron-Distal,intron-Proximal6.3235932.59932K562AQR
chr177951393579513987-5'-UTR,CDS,intron-Distal3.423924.51003HepG2PPIG
chr177951402379514064-5'-UTR,CDS,intron-Distal4.086343.48187K562RBM15
chr177951925879519372-5'-UTR,CDS,intron-Distal4.478446.42503K562DDX3X
chr177951758179517649-5'-UTR,CDS,intron-Distal3.671505.65930HepG2RBM15
chr177951776879517836-5'-UTR,CDS,intron-Distal,intron-Proximal3.514153.93112K562RBM15
chr177951469479514805-5'-UTR,CDS,intron-Distal,intron-Proximal4.6815710.88673HepG2AQR
chr177951468979514804-5'-UTR,CDS,intron-Distal,intron-Proximal4.1380512.76711HepG2PRPF8
chr177951419579514243-5'-UTR,CDS,intron-Distal,intron-Proximal3.448363.63681K562RBM15
chr177951618379516233-5'-UTR,CDS,intron-Distal,intron-Proximal6.6018521.64132HepG2AQR
chr177951617379516247-5'-UTR,CDS,intron-Distal,intron-Proximal3.653367.10944HepG2PPIG
chr177951465479514694-5'-UTR,CDS,intron-Distal4.272783.63072HepG2AQR
chr177951479779514867-CDS,intron-Distal,intron-Proximal3.221203.33980HepG2SF3B4
chr177951618779516194-intron-Distal,intron-Proximal5.3672650.72411K562AQR
chr177951384179513883-intron-Distal,intron-Proximal3.308434.64824K562PRPF8
chr177951617079516187-intron-Distal,intron-Proximal4.0628719.94310K562AQR
chr177951612279516170-intron-Distal,intron-Proximal5.4558124.96343K562AQR
chr177951384079513885-intron-Distal,intron-Proximal5.312116.04760K562AQR
chr177951823579518280-intron-Distal,intron-Proximal4.264774.07325HepG2SF3B4
chr177951612579516183-intron-Distal,intron-Proximal5.361728.16909HepG2AQR
chr177951619479516232-intron-Distal,intron-Proximal5.2016752.12698K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C17orf70 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C17orf70 is not available on ENCORE database.

  • 98 RBPs can affect the levels of C17orf70.  








The Knockdown/knockout RNA-Seq assay for C17orf70 is not available on ENCORE database.





98 RBPs can affect the gene expression of C17orf70 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C17orf70ENSG00000185504.12779.92440579.727500.427902.140601.30920HepG2ABCF1
C17orf70ENSG00000185504.12395.72150248.870200.669001.926801.41990HepG2BOP1
C17orf70ENSG00000185504.12221.77440103.554301.098605.043104.00610HepG2CNOT7
C17orf70ENSG00000185504.12217.16930118.931900.868605.366903.95150HepG2YBX3
C17orf70ENSG00000185504.12386.98050224.648700.784506.925105.99540HepG2CELF1
C17orf70ENSG00000185504.12725.86470511.030400.506206.582405.38040HepG2DDX19B
C17orf70ENSG00000185504.12202.91790119.085800.768803.647502.32020HepG2DDX1
C17orf70ENSG00000185504.12574.54520256.383801.164003.725902.84380HepG2DDX55
C17orf70ENSG00000185504.12330.80620116.765101.502308.840907.63680HepG2DNAJC21
C17orf70ENSG00000185504.12337.74990115.758901.5447022.1775020.49330HepG2DNAJC2
C17orf70ENSG00000185504.12347.67420228.295500.606703.343502.45380HepG2EIF4G2
C17orf70ENSG00000185504.121216.53400855.746000.507404.598603.85930HepG2ETF1
C17orf70ENSG00000185504.12269.34960458.25970-0.766706.535705.35540HepG2FUBP3
C17orf70ENSG00000185504.12793.86420465.777100.769202.878302.17190HepG2FXR1
C17orf70ENSG00000185504.12251.1957087.624301.5193010.804608.04620HepG2HNRNPA0
C17orf70ENSG00000185504.12180.1890085.560301.074405.309703.33140HepG2HNRNPAB
C17orf70ENSG00000185504.12335.84880131.132401.356702.438101.78430HepG2HNRNPC
C17orf70ENSG00000185504.12183.9565089.702501.036005.147903.07710HepG2HNRNPD
C17orf70ENSG00000185504.12444.96750318.109700.484104.176603.31460HepG2HNRNPF
C17orf70ENSG00000185504.12452.67020220.094501.0402013.8245012.42760HepG2HNRNPL
C17orf70ENSG00000185504.12366.86410130.264901.4937019.6959018.19180HepG2HNRNPU
C17orf70ENSG00000185504.12392.40740313.251600.324901.920101.30850HepG2IGF2BP1
C17orf70ENSG00000185504.12250.40830133.059800.912104.440603.53180HepG2ILF2
C17orf70ENSG00000185504.12269.5009098.731701.4486010.846308.37750HepG2KHDRBS1
C17orf70ENSG00000185504.12866.63250465.942000.895203.702002.94340HepG2MAGOH
C17orf70ENSG00000185504.12898.08620479.434100.905403.722802.99240HepG2NCBP2
C17orf70ENSG00000185504.12531.12480239.568301.148509.329507.95510HepG2NOL12
C17orf70ENSG00000185504.12563.57070235.621501.258005.730904.12550HepG2NONO
C17orf70ENSG00000185504.12232.55860128.929600.850903.599402.64540HepG2PARN
C17orf70ENSG00000185504.12684.54510465.539600.556106.569905.69650HepG2PCBP1
C17orf70ENSG00000185504.12301.59230197.383600.611503.414102.04650HepG2PKM
C17orf70ENSG00000185504.12355.63200116.184401.6139021.9417020.01810HepG2PPIL4
C17orf70ENSG00000185504.12746.50720473.734000.656008.455007.60700HepG2PTBP1
C17orf70ENSG00000185504.12530.33790228.675501.2135014.8377013.60470HepG2PUF60
C17orf70ENSG00000185504.12728.97800242.733401.5864042.4208040.66970HepG2PUM1
C17orf70ENSG00000185504.12523.84630242.565901.110703.025602.32370HepG2PUM2
C17orf70ENSG00000185504.12753.85290562.833200.421504.547903.79530HepG2PUS1
C17orf70ENSG00000185504.12530.45780225.583301.233503.409802.30320HepG2RBM27
C17orf70ENSG00000185504.12171.99930100.035000.781802.922401.33690HepG2RBM47
C17orf70ENSG00000185504.12792.41300527.195500.587807.199306.39730HepG2NELFE
C17orf70ENSG00000185504.12684.86980491.056200.479804.860804.07380HepG2RECQL
C17orf70ENSG00000185504.12475.18950207.985101.191903.293702.42000HepG2RPS2
C17orf70ENSG00000185504.12341.53490104.040901.7148015.0944013.28710HepG2RPS3A
C17orf70ENSG00000185504.12333.82950116.001801.5249019.8120018.30950HepG2SAFB2
C17orf70ENSG00000185504.12201.6719097.971001.041505.286903.48040HepG2SART3
C17orf70ENSG00000185504.12196.0814098.802400.988703.312301.61120HepG2SBDS
C17orf70ENSG00000185504.12666.33240493.164300.434103.957303.27080HepG2SF3B4
C17orf70ENSG00000185504.12520.19490219.231901.246507.801206.71440HepG2SLBP
C17orf70ENSG00000185504.12264.30650135.269500.966306.399605.48560HepG2SMN1
C17orf70ENSG00000185504.12422.53960206.083801.035805.238403.89520HepG2SMNDC1
C17orf70ENSG00000185504.12344.53380514.77880-0.579303.694603.16810HepG2SRSF1
C17orf70ENSG00000185504.12603.42720225.764901.4183026.8300025.16270HepG2SRSF5
C17orf70ENSG00000185504.12290.57240418.81890-0.527404.151403.50070HepG2SRSF9
C17orf70ENSG00000185504.12920.35180701.316400.392004.186903.58320HepG2SSB
C17orf70ENSG00000185504.12155.9775090.523500.784903.176601.99160HepG2STIP1
C17orf70ENSG00000185504.12781.46610256.773001.6056041.7970039.89550HepG2SUCLG1
C17orf70ENSG00000185504.12125.24390462.76430-1.8855030.9625029.35480HepG2TAF15
C17orf70ENSG00000185504.12345.31070126.545801.448109.650008.81460HepG2TIAL1
C17orf70ENSG00000185504.12493.72660127.710201.9507040.2215038.38680HepG2TRIM56
C17orf70ENSG00000185504.12544.54510223.380601.2854015.4025013.17060HepG2TUFM
C17orf70ENSG00000185504.12192.69840500.57920-1.3773010.811709.54860HepG2U2AF1
C17orf70ENSG00000185504.12746.74020236.428001.659108.886507.35180HepG2UBE2L3
C17orf70ENSG00000185504.12289.8705093.192801.6370013.5511011.19880HepG2XPO5
C17orf70ENSG00000185504.12641.92820514.381800.319502.778102.23050HepG2ZNF622
C17orf70ENSG00000185504.12401.510701261.83850-1.6520016.4625015.18930K562AQR
C17orf70ENSG00000185504.12762.93800448.866000.765208.330506.63000K562BCLAF1
C17orf70ENSG00000185504.12537.03200722.52460-0.428003.150901.53300K562CEBPZ
C17orf70ENSG00000185504.121085.89020874.145700.312803.041301.87610K562CPEB4
C17orf70ENSG00000185504.12593.11080340.532000.800403.295202.12650K562CSTF2
C17orf70ENSG00000185504.121246.283801752.89170-0.492106.452704.97670K562CELF1
C17orf70ENSG00000185504.12988.74150796.585000.311702.764002.04560K562EIF2S2
C17orf70ENSG00000185504.12286.38040141.954801.012407.609606.29750K562EIF3G
C17orf70ENSG00000185504.12668.02000502.391900.411003.561702.22390K562EIF4B
C17orf70ENSG00000185504.12161.75030284.79670-0.816202.217801.45050K562FMR1
C17orf70ENSG00000185504.12133.75950241.42660-0.851902.296901.46810K562FTO
C17orf70ENSG00000185504.1212.2275073.39200-2.585508.929407.51180K562G3BP2
C17orf70ENSG00000185504.12110.64450221.77590-1.003202.937901.66510K562HNRNPK
C17orf70ENSG00000185504.12593.53680222.391801.416102.560401.58590K562IGF2BP2
C17orf70ENSG00000185504.12334.69800591.26050-0.820902.835201.39560K562ILF2
C17orf70ENSG00000185504.12498.03830647.94000-0.379602.750201.92680K562KIF1C
C17orf70ENSG00000185504.12372.41280233.448200.673703.713802.72970K562MAGOH
C17orf70ENSG00000185504.12480.42530232.932501.044304.882203.61870K562MATR3
C17orf70ENSG00000185504.12347.12630508.77080-0.551602.677101.81150K562NAA15
C17orf70ENSG00000185504.12653.93510349.898300.902107.402705.11930K562NONO
C17orf70ENSG00000185504.12941.48670588.731700.677203.500502.55930K562PPIG
C17orf70ENSG00000185504.12593.06890226.830201.3865018.8671017.21230K562PTBP1
C17orf70ENSG00000185504.12967.336201554.99980-0.684805.652604.48880K562PUF60
C17orf70ENSG00000185504.121120.265901654.39380-0.562506.358504.68620K562PUM1
C17orf70ENSG00000185504.12377.25440217.351900.795405.554404.31450K562RBM22
C17orf70ENSG00000185504.12450.82700211.992301.088505.386003.24350K562RBM34
C17orf70ENSG00000185504.12366.09870228.763400.678302.270801.30480K562NELFE
C17orf70ENSG00000185504.12310.37090161.317900.944003.387002.27040K562RPS3
C17orf70ENSG00000185504.12793.05920980.54740-0.306202.295301.54700K562SF3A3
C17orf70ENSG00000185504.12109.55620254.17320-1.214102.504701.58100K562SF3B1
C17orf70ENSG00000185504.12164.85470440.78210-1.418904.806603.05000K562SNRNP200
C17orf70ENSG00000185504.12600.36230383.396900.646902.621001.63140K562SRFBP1
C17orf70ENSG00000185504.12600.48870344.795900.800304.111402.06620K562SRP68
C17orf70ENSG00000185504.12294.42390155.713400.918905.831104.19710K562SRSF4
C17orf70ENSG00000185504.12423.45210210.117301.010904.534503.13250K562SRSF5
C17orf70ENSG00000185504.12251.31110527.40640-1.069403.577701.88450K562SUPT6H
C17orf70ENSG00000185504.1230.5840072.03700-1.236003.000701.45480K562TAF15
C17orf70ENSG00000185504.12448.82340225.016700.996009.043307.66530K562TARDBP
C17orf70ENSG00000185504.12462.76420217.071601.0920011.132309.37200K562TIA1
C17orf70ENSG00000185504.12410.43720213.170300.945105.817104.09620K562TRA2A
C17orf70ENSG00000185504.1226.0216071.06090-1.449304.049602.67280K562U2AF1
C17orf70ENSG00000185504.1217.0870073.41660-2.103207.649906.30800K562U2AF2
C17orf70ENSG00000185504.12626.17490937.57730-0.582409.419707.95670K562WDR43
C17orf70ENSG00000185504.12681.56840360.164100.920104.437102.77400K562XRN2
C17orf70ENSG00000185504.12212.65380518.90480-1.287004.522502.26810K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C17orf70 is not available on ENCORE database.





1 RBPs can affect the splicing of C17orf70 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC17orf70ENSG00000185504.12chr17-7951342679513566795127717951290879513934795142290.225000.002810.04439includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C17orf70 is not avaliable on ENCORE database.