ABCB8

General Information

Gene Name       : ABCB8
Gene ID             : ENSG00000197150.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ABCB8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ABCB8ENSG00000197150.122.987.835.41ENCSR000AEF
HepG2ABCB8ENSG00000197150.1211.832.927.38ENCSR985KAT
K562ABCB8ENSG00000197150.1264.4641.3252.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ABCB8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ABCB8 RNA is bound by 11 proteins.  







eCLIP assay for ABCB8 is not avaliable on ENCORE database.





11 proteins are bound to ABCB8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7150730720150730839+3'-UTR,CDS,intron-Distal,intron-Proximal4.007785.75237K562PCBP1
chr7150742468150742604+3'-UTR4.373264.30926HepG2LARP4
chr7150731304150731408+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.326714.38519K562BUD13
chr7150738318150738368+3'-UTR,CDS,intron-Proximal5.538677.81430K562AQR
chr7150733158150733244+3'-UTR,5'-UTR,CDS,intron-Proximal3.014843.11583K562UCHL5
chr7150731506150731584+3'-UTR,5'-UTR,CDS,intron-Proximal4.4599811.97787K562PRPF8
chr7150732637150732694+3'-UTR,5'-UTR,CDS,intron-Proximal4.831155.65342K562AQR
chr7150732904150732988+3'-UTR,5'-UTR,CDS,intron-Proximal5.404328.34710K562AQR
chr7150731371150731432+3'-UTR,5'-UTR,CDS,intron-Distal3.370194.21741K562PUM2
chr7150742914150743080+3'-UTR4.948178.25079K562HNRNPK
chr7150731331150731373+3'-UTR,CDS,intron-Distal,intron-Proximal3.447084.98422K562PRPF8
chr7150742560150742610+3'-UTR7.0296021.01059K562PABPC4
chr7150737343150737439+3'-UTR,CDS,intron-Distal,intron-Proximal4.312117.15298K562AQR
chr7150731910150731973+5'-UTR,CDS,intron-Proximal4.234824.89208K562AQR
chr7150726925150727058+intron-Distal4.610965.33932K562ILF3
chr7150740929150741028+intron-Distal,intron-Proximal4.049153.19125K562GTF2F1
chr7150733279150733333+intron-Proximal4.005356.42898K562AQR
chr7150733745150733780+intron-Proximal5.027315.69951K562AQR
chr7150733736150733745+intron-Proximal4.892345.17615K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ABCB8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ABCB8 is not available on ENCORE database.

  • 99 RBPs can affect the levels of ABCB8.  








The Knockdown/knockout RNA-Seq assay for ABCB8 is not available on ENCORE database.





99 RBPs can affect the gene expression of ABCB8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ABCB8ENSG00000197150.8421.94790311.371800.438303.242902.59230HepG2ACO1
ABCB8ENSG00000197150.8602.42970226.708801.4099014.6874013.56040HepG2AKAP1
ABCB8ENSG00000197150.8264.95820178.206200.572102.480101.74340HepG2CIRBP
ABCB8ENSG00000197150.8199.6958066.310401.590408.464407.14620HepG2CNOT7
ABCB8ENSG00000197150.8533.47550217.135401.2967013.7228012.43560HepG2DDX3X
ABCB8ENSG00000197150.862.81880182.35080-1.537406.930605.42500HepG2DDX59
ABCB8ENSG00000197150.8417.70450186.605101.162403.408602.73100HepG2DDX6
ABCB8ENSG00000197150.8192.30940122.910100.645703.134002.38970HepG2DNAJC21
ABCB8ENSG00000197150.8176.06320121.857300.530802.390501.77600HepG2DNAJC2
ABCB8ENSG00000197150.8272.60860149.894000.862804.434203.29390HepG2EEF2
ABCB8ENSG00000197150.8271.03850179.307300.596002.642602.06340HepG2EIF2S1
ABCB8ENSG00000197150.8471.21920198.116601.249905.568604.66260HepG2EIF4A3
ABCB8ENSG00000197150.8470.19910200.009501.2331012.1420010.79700HepG2FXR1
ABCB8ENSG00000197150.8350.32240185.476000.917406.300805.31730HepG2G3BP1
ABCB8ENSG00000197150.8197.50550108.319000.866504.253303.13100HepG2GEMIN5
ABCB8ENSG00000197150.8294.12270182.034600.692103.437102.72930HepG2GPKOW
ABCB8ENSG00000197150.8200.16150124.087900.689703.005602.33480HepG2HNRNPA1
ABCB8ENSG00000197150.8222.87580138.035700.691101.884101.30110HepG2HNRNPC
ABCB8ENSG00000197150.8304.32150187.956400.695103.705002.90550HepG2HNRNPK
ABCB8ENSG00000197150.8251.75270173.718600.535202.183901.61820HepG2HNRNPLL
ABCB8ENSG00000197150.8414.93960188.510201.138209.897508.70680HepG2IGF2BP2
ABCB8ENSG00000197150.8119.5070063.197000.919103.119801.83680HepG2KHDRBS1
ABCB8ENSG00000197150.8227.27850136.307200.737502.498001.42460HepG2LARP7
ABCB8ENSG00000197150.8541.86990200.079901.4373016.7805015.23510HepG2MAGOH
ABCB8ENSG00000197150.8285.40480201.180500.504401.929501.39780HepG2MATR3
ABCB8ENSG00000197150.8458.09080205.903801.1536010.230509.05510HepG2NCBP2
ABCB8ENSG00000197150.8288.98050206.346700.485802.280501.58790HepG2NOL12
ABCB8ENSG00000197150.8341.80070186.191900.876302.431801.41360HepG2NONO
ABCB8ENSG00000197150.8211.04280135.714100.636902.512501.70140HepG2PARN
ABCB8ENSG00000197150.8165.22690100.614900.715502.954501.68010HepG2PKM
ABCB8ENSG00000197150.8187.67020122.300200.617702.935502.17870HepG2PPIL4
ABCB8ENSG00000197150.8135.67230251.35920-0.889604.813903.82470HepG2PRPF4
ABCB8ENSG00000197150.8337.31270201.974800.739805.929205.18970HepG2PTBP1
ABCB8ENSG00000197150.8443.36180196.957001.1705012.1508011.01990HepG2PUF60
ABCB8ENSG00000197150.8335.42840209.056400.682003.962003.27980HepG2PUM1
ABCB8ENSG00000197150.8388.23370208.917500.893905.546304.61070HepG2PUM2
ABCB8ENSG00000197150.8291.34000218.723700.413501.921501.38620HepG2QKI
ABCB8ENSG00000197150.8541.31540224.770801.2679018.6211017.45960HepG2NELFE
ABCB8ENSG00000197150.8310.63370209.357500.569103.523902.83860HepG2RECQL
ABCB8ENSG00000197150.8192.80580281.08830-0.543902.687202.01140HepG2RPLP0
ABCB8ENSG00000197150.8249.87910118.401101.077407.180906.24450HepG2RPS19
ABCB8ENSG00000197150.8291.89260151.574800.945304.272603.28510HepG2RPS2
ABCB8ENSG00000197150.8194.8920066.597701.549009.065207.64790HepG2RPS3A
ABCB8ENSG00000197150.8273.17730154.754000.819803.118901.97220HepG2RPS5
ABCB8ENSG00000197150.8219.69730122.107100.847304.597603.80140HepG2SAFB2
ABCB8ENSG00000197150.8283.53010210.265000.431202.129101.60020HepG2SF3B4
ABCB8ENSG00000197150.8248.49270142.386800.803305.715304.84360HepG2SMN1
ABCB8ENSG00000197150.8260.55310124.527901.065003.825702.68500HepG2SMNDC1
ABCB8ENSG00000197150.899.84840191.32300-0.938203.539902.65150HepG2SNRNP70
ABCB8ENSG00000197150.8245.90590488.91470-0.991506.461905.78390HepG2SRFBP1
ABCB8ENSG00000197150.8333.75240219.478000.604604.011203.46800HepG2SRSF1
ABCB8ENSG00000197150.8312.59170194.439800.684904.617303.84460HepG2SRSF5
ABCB8ENSG00000197150.892.81360178.56300-0.944005.454704.72460HepG2SRSF9
ABCB8ENSG00000197150.8443.82000221.154401.0048011.7196010.58970HepG2SUCLG1
ABCB8ENSG00000197150.8388.55620201.593800.946603.029902.32660HepG2SUPV3L1
ABCB8ENSG00000197150.8101.96260197.29440-0.952305.370404.63240HepG2TAF15
ABCB8ENSG00000197150.8302.55950133.199401.1835010.806009.93030HepG2TIAL1
ABCB8ENSG00000197150.8217.33750134.433600.692904.082703.42480HepG2TRIM56
ABCB8ENSG00000197150.8350.51900203.609900.783603.868902.87270HepG2UBE2L3
ABCB8ENSG00000197150.8485.27960267.812400.8575011.4359010.51060HepG2ZNF622
ABCB8ENSG00000197150.81283.190401484.58620-0.210302.064901.56130K562AGGF1
ABCB8ENSG00000197150.82599.412302016.454300.366303.948702.42650K562APOBEC3C
ABCB8ENSG00000197150.81172.161702099.88400-0.8411014.0464012.86760K562AQR
ABCB8ENSG00000197150.81324.561301620.75810-0.291203.162202.18200K562ATP5C1
ABCB8ENSG00000197150.81233.32630963.700200.355802.843501.87070K562BCLAF1
ABCB8ENSG00000197150.8543.47480784.24700-0.529104.001402.95020K562BOP1
ABCB8ENSG00000197150.8957.30810582.004700.717904.053102.48850K562CIRBP
ABCB8ENSG00000197150.8656.82590833.82260-0.344202.637101.87010K562CPSF6
ABCB8ENSG00000197150.82336.099702809.90130-0.266402.730701.76180K562CELF1
ABCB8ENSG00000197150.81369.01940810.692600.755803.687802.18100K562EEF2
ABCB8ENSG00000197150.81192.95230783.131700.607105.151703.88470K562EFTUD2
ABCB8ENSG00000197150.8630.41000449.965200.486404.213903.23990K562EIF3G
ABCB8ENSG00000197150.81318.89020948.222200.475903.757902.80580K562EIF4A3
ABCB8ENSG00000197150.8404.99680744.76750-0.878905.253903.60650K562FKBP4
ABCB8ENSG00000197150.8575.63580848.50510-0.559804.690403.57460K562FMR1
ABCB8ENSG00000197150.81275.16730986.104000.370804.114003.39800K562FXR1
ABCB8ENSG00000197150.873.36510263.61170-1.8452011.7552010.09480K562G3BP2
ABCB8ENSG00000197150.81087.952101313.35960-0.271602.399901.34580K562GLRX3
ABCB8ENSG00000197150.81169.25980856.878800.448303.898403.20460K562HNRNPC
ABCB8ENSG00000197150.81812.320101363.861100.410002.250801.30680K562HNRNPL
ABCB8ENSG00000197150.81222.44340902.867600.437103.149802.15160K562HNRNPM
ABCB8ENSG00000197150.8930.07270543.412300.775202.775501.74830K562IGF2BP2
ABCB8ENSG00000197150.81172.516601639.46930-0.483606.018104.69610K562KIF1C
ABCB8ENSG00000197150.81026.71460570.720100.8471012.4804010.60500K562MAGOH
ABCB8ENSG00000197150.81271.825301569.29120-0.303202.752001.68010K562MAK16
ABCB8ENSG00000197150.81044.02960569.503800.8743013.7891011.62820K562MATR3
ABCB8ENSG00000197150.81440.837901836.60530-0.350102.876501.94500K562MBNL1
ABCB8ENSG00000197150.8872.382401287.31810-0.561304.052602.92830K562NAA15
ABCB8ENSG00000197150.81049.68950772.286000.442702.964401.61190K562NONO
ABCB8ENSG00000197150.81200.344901672.76300-0.478803.955702.96130K562PCBP3
ABCB8ENSG00000197150.81035.099601283.04720-0.309802.796701.99070K562POLR2G
ABCB8ENSG00000197150.81102.95470768.348300.521404.785103.55170K562PSIP1
ABCB8ENSG00000197150.81086.04380554.519100.9697017.5364015.93380K562PTBP1
ABCB8ENSG00000197150.81876.099202652.11270-0.499407.729705.87030K562PUM1
ABCB8ENSG00000197150.82048.929702598.52400-0.342804.709103.44570K562PUM2
ABCB8ENSG00000197150.8126.96980251.50810-0.986103.280701.71570K562RAVER1
ABCB8ENSG00000197150.8886.33480518.279200.774003.423801.82970K562RBM34
ABCB8ENSG00000197150.81082.01800701.339300.625407.623605.97430K562RCC2
ABCB8ENSG00000197150.8925.44680559.375600.726203.872402.55210K562NELFE
ABCB8ENSG00000197150.8857.39330490.109500.806805.347003.89140K562RPS3
ABCB8ENSG00000197150.81884.984101143.285800.7213011.634609.53120K562SAFB
ABCB8ENSG00000197150.8469.41210274.067500.776204.386403.29990K562SF3B4
ABCB8ENSG00000197150.8273.33240413.18250-0.596104.074902.04440K562SND1
ABCB8ENSG00000197150.81093.33340664.817700.717603.797402.53910K562SRFBP1
ABCB8ENSG00000197150.81852.430201551.091700.256002.905801.95030K562SRPK2
ABCB8ENSG00000197150.8978.48800543.656800.8478012.3565010.86060K562SRSF1
ABCB8ENSG00000197150.8641.03950473.114600.438102.619201.60100K562SRSF4
ABCB8ENSG00000197150.8776.78760513.549800.596902.675901.64710K562SRSF5
ABCB8ENSG00000197150.8312.28570464.14520-0.571704.595402.88710K562SSB
ABCB8ENSG00000197150.81642.550701286.956100.351903.647002.70510K562SYNCRIP
ABCB8ENSG00000197150.8865.97830550.123100.654505.665204.63220K562TARDBP
ABCB8ENSG00000197150.8903.16460530.680300.7670010.330108.62850K562TIA1
ABCB8ENSG00000197150.8897.30530520.975500.784309.399007.03080K562TRA2A
ABCB8ENSG00000197150.82264.666302811.23740-0.311903.349601.78960K562UBE2L3
ABCB8ENSG00000197150.81349.644201626.69240-0.269403.117802.35670K562UPF1
ABCB8ENSG00000197150.81122.63040795.287000.497203.915702.37890K562XRN2
ABCB8ENSG00000197150.81748.458002365.74490-0.436204.911403.70920K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ABCB8 is not available on ENCORE database.





6 RBPs can affect the splicing of ABCB8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEABCB8ENSG00000197150.8chr7+1507306911507310041507255091507256971507313591507315150.078000.002020.06785includedK562PTBP1
A5SSABCB8ENSG00000197150.8chr7+1507390471507392601507390471507391951507410571507413080.151000.000000.00001longerK562AQR
A5SSABCB8ENSG00000197150.8chr7+1507375841507377311507375841507377211507379141507380090.289000.000910.06314longerK562HNRNPC
RIABCB8ENSG00000197150.8chr7+1507313591507316861507313591507315151507315911507316860.131000.002420.04922includedK562HNRNPC
RIABCB8ENSG00000197150.8chr7+1507313591507316861507313591507315151507315911507316860.112000.004380.07324includedK562RBM22
RIABCB8ENSG00000197150.8chr7+1507313591507316861507313591507315151507315911507316860.116000.000560.00778includedHepG2RBM22
RIABCB8ENSG00000197150.8chr7+1507313591507316861507313591507315151507315911507316860.097000.009700.07830includedK562EFTUD2
RIABCB8ENSG00000197150.8chr7+1507313591507316861507313591507315151507315911507316860.196000.000000.00000includedK562AQR
RIABCB8ENSG00000197150.8chr7+1507313591507316861507313591507315151507315911507316860.083000.000910.06015includedK562LARP4
MXEABCB8ENSG00000197150.8chr7+1507299301507301481507313591507315151507255361507256971507315911507316860.076000.000080.000981includedK562AQR
MXEABCB8ENSG00000197150.8chr7+1507299301507301481507309621507310041507255361507256971507313591507315150.408000.000060.002001includedK562HNRNPC
MXEABCB8ENSG00000197150.8chr7+1507299301507301481507313591507315151507255361507256971507315911507316860.295000.000000.000041includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ABCB8 is not avaliable on ENCORE database.