ZNRD1-AS1

General Information

Gene Name       : ZNRD1-AS1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNRD1-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNRD1-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNRD1-AS1 RNA is bound by 7 proteins.  







eCLIP assay for ZNRD1-AS1 is not avaliable on ENCORE database.





7 proteins are bound to ZNRD1-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62997722929977292-intron-Distal4.145603.80299K562HNRNPL
chr63000269130002815-intron-Distal,intron-Proximal4.141693.54010K562UPF1
chr63000269130002852-intron-Distal,intron-Proximal3.966516.12731K562UCHL5
chr62997993329980006-intron-Distal5.3864011.51466K562KHSRP
chr62998069229980775-intron-Distal3.406164.56724K562KHSRP
chr62998482929984895-intron-Distal4.727575.51162HepG2U2AF2
chr62998473429984878-intron-Distal3.749747.93121K562KHSRP
chr62998000629980067-intron-Distal4.185109.06934K562KHSRP
chr63000267630002779-intron-Distal,intron-Proximal3.405334.88141HepG2GRWD1
chr63000267530002789-intron-Distal,intron-Proximal3.581603.61259K562ZNF622
chr63000267830002859-intron-Distal,intron-Proximal3.081683.85473K562GRWD1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNRD1-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNRD1-AS1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of ZNRD1-AS1.  








The Knockdown/knockout RNA-Seq assay for ZNRD1-AS1 is not available on ENCORE database.





99 RBPs can affect the gene expression of ZNRD1-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNRD1-AS1ENSG00000204623.4140.06860301.57010-1.106406.705305.91830HepG2AKAP1
ZNRD1-AS1ENSG00000204623.4355.54410468.70300-0.398602.894702.11100HepG2AKAP8L
ZNRD1-AS1ENSG00000204623.4416.19480303.578700.455102.406001.75850HepG2CPSF6
ZNRD1-AS1ENSG00000204623.4488.80690367.966800.409602.333801.70380HepG2DDX21
ZNRD1-AS1ENSG00000204623.4298.02780446.28680-0.582504.840603.99040HepG2DKC1
ZNRD1-AS1ENSG00000204623.4242.57800356.99140-0.557402.413201.54980HepG2EEF2
ZNRD1-AS1ENSG00000204623.4537.48900238.583501.1716012.0422010.86070HepG2EIF2S1
ZNRD1-AS1ENSG00000204623.4425.75620263.695500.691104.241603.45430HepG2EIF4A3
ZNRD1-AS1ENSG00000204623.4421.73030256.682100.716202.916602.21080HepG2EIF4B
ZNRD1-AS1ENSG00000204623.4293.55250455.87040-0.635005.025803.90350HepG2EWSR1
ZNRD1-AS1ENSG00000204623.4585.00290304.097800.943803.908202.69960HepG2FTO
ZNRD1-AS1ENSG00000204623.4340.07230176.046900.949807.512806.25470HepG2FUBP3
ZNRD1-AS1ENSG00000204623.4526.14180246.767801.0922010.664709.40200HepG2G3BP1
ZNRD1-AS1ENSG00000204623.4400.27980261.907600.611903.600302.57780HepG2G3BP2
ZNRD1-AS1ENSG00000204623.4175.47130258.05590-0.556402.405801.57640HepG2GEMIN5
ZNRD1-AS1ENSG00000204623.4320.91680434.40720-0.436802.259001.34260HepG2GNB2L1
ZNRD1-AS1ENSG00000204623.4244.74460344.13180-0.491702.159501.59030HepG2GPKOW
ZNRD1-AS1ENSG00000204623.4414.82900249.753200.731905.011204.09190HepG2HNRNPK
ZNRD1-AS1ENSG00000204623.4521.46910427.959800.285002.023601.43550HepG2HNRNPL
ZNRD1-AS1ENSG00000204623.4255.08900373.29540-0.549303.309102.27670HepG2HNRNPM
ZNRD1-AS1ENSG00000204623.4351.41140493.72490-0.490502.455701.30110HepG2HSPD1
ZNRD1-AS1ENSG00000204623.4415.24180235.339700.819102.425401.51240HepG2IGF2BP3
ZNRD1-AS1ENSG00000204623.4474.85310252.280200.912406.332104.75300HepG2KHSRP
ZNRD1-AS1ENSG00000204623.4277.52320425.57940-0.616804.176902.77640HepG2LARP7
ZNRD1-AS1ENSG00000204623.4191.85050303.34150-0.661002.410501.42640HepG2METAP2
ZNRD1-AS1ENSG00000204623.4272.11580384.81220-0.499902.839101.40180HepG2NIP7
ZNRD1-AS1ENSG00000204623.4419.39050247.900000.758406.840706.05640HepG2PTBP1
ZNRD1-AS1ENSG00000204623.4255.02430444.72580-0.802303.695203.01730HepG2PUF60
ZNRD1-AS1ENSG00000204623.4535.64070268.492200.9963011.6928010.54090HepG2QKI
ZNRD1-AS1ENSG00000204623.4157.45820446.98920-1.505308.399107.21400HepG2RAVER1
ZNRD1-AS1ENSG00000204623.4420.60680589.38660-0.486704.039903.44430HepG2RBM22
ZNRD1-AS1ENSG00000204623.4352.68790513.17770-0.541103.460002.34390HepG2RBM27
ZNRD1-AS1ENSG00000204623.4256.84060416.72280-0.698203.502302.30920HepG2RCC2
ZNRD1-AS1ENSG00000204623.4356.66950256.949500.473002.813002.19180HepG2RECQL
ZNRD1-AS1ENSG00000204623.4202.98050281.98670-0.474302.146001.59810HepG2RPS19
ZNRD1-AS1ENSG00000204623.4357.44960483.12190-0.434602.363901.37690HepG2RPS5
ZNRD1-AS1ENSG00000204623.4268.00440544.57820-1.022903.283902.54740HepG2SF3A3
ZNRD1-AS1ENSG00000204623.4392.16490258.104600.603404.397403.67820HepG2SF3B4
ZNRD1-AS1ENSG00000204623.4523.38560426.443800.295402.111901.48460HepG2SLBP
ZNRD1-AS1ENSG00000204623.4267.37380393.32510-0.556904.663403.86450HepG2SMN1
ZNRD1-AS1ENSG00000204623.4511.90780361.689400.501002.183301.49320HepG2SNRNP70
ZNRD1-AS1ENSG00000204623.4531.22980665.68250-0.325502.439001.95800HepG2SRFBP1
ZNRD1-AS1ENSG00000204623.4194.24400269.40180-0.471902.280701.84070HepG2SRSF1
ZNRD1-AS1ENSG00000204623.4338.01200219.169700.624904.827604.13640HepG2SRSF9
ZNRD1-AS1ENSG00000204623.4473.07880577.95600-0.288902.015001.55970HepG2SSB
ZNRD1-AS1ENSG00000204623.4462.97370242.139000.9350010.348409.37430HepG2TAF15
ZNRD1-AS1ENSG00000204623.4313.95130222.503200.496602.678401.85430HepG2TIA1
ZNRD1-AS1ENSG00000204623.4337.04320462.81590-0.457502.372001.78630HepG2U2AF1
ZNRD1-AS1ENSG00000204623.4668.11380459.917200.538603.197402.29830HepG2UBE2L3
ZNRD1-AS1ENSG00000204623.4262.69260178.828700.554702.838102.06940HepG2UCHL5
ZNRD1-AS1ENSG00000204623.4371.18780466.27690-0.329002.100401.56450HepG2UTP3
ZNRD1-AS1ENSG00000204623.4315.48800491.46840-0.639502.790001.73150HepG2XRCC6
ZNRD1-AS1ENSG00000204623.4184.31300297.97260-0.693003.055502.29450HepG2XRN2
ZNRD1-AS1ENSG00000204623.4411.60760531.16110-0.367903.051102.48420HepG2ZNF622
ZNRD1-AS1ENSG00000204623.4484.248601189.12100-1.2961036.6604034.64870K562AGGF1
ZNRD1-AS1ENSG00000204623.4732.801301306.58200-0.8343012.8322010.32060K562AKAP8
ZNRD1-AS1ENSG00000204623.4421.873601237.31400-1.5523035.9019033.08360K562AKAP8L
ZNRD1-AS1ENSG00000204623.4888.611601071.30090-0.269701.793901.30110K562AQR
ZNRD1-AS1ENSG00000204623.4725.586801298.20210-0.8393017.1291014.64570K562ATP5C1
ZNRD1-AS1ENSG00000204623.4499.76610620.53550-0.312302.306501.43170K562BCLAF1
ZNRD1-AS1ENSG00000204623.4510.23630685.54420-0.426102.691501.83090K562BOP1
ZNRD1-AS1ENSG00000204623.4819.356501421.13050-0.7945014.4788011.86690K562CCDC124
ZNRD1-AS1ENSG00000204623.4537.01480728.87020-0.440703.139802.30330K562CPSF6
ZNRD1-AS1ENSG00000204623.4821.310801079.56610-0.394504.798703.97430K562DDX47
ZNRD1-AS1ENSG00000204623.4811.031301331.56540-0.7153013.7307011.45690K562DKC1
ZNRD1-AS1ENSG00000204623.4319.94240439.67210-0.458602.612901.31250K562DNAJC21
ZNRD1-AS1ENSG00000204623.4383.95530532.29220-0.471302.900301.96660K562EFTUD2
ZNRD1-AS1ENSG00000204623.4340.58840569.95300-0.742805.377403.87350K562EIF3D
ZNRD1-AS1ENSG00000204623.4355.38100554.40250-0.641606.402105.20750K562EIF3G
ZNRD1-AS1ENSG00000204623.4298.40430428.43730-0.521802.155901.42700K562EIF4A3
ZNRD1-AS1ENSG00000204623.4513.85810818.77180-0.672105.588204.35800K562FIP1L1
ZNRD1-AS1ENSG00000204623.4473.01680741.72440-0.649005.859704.60550K562FMR1
ZNRD1-AS1ENSG00000204623.4623.94480974.17450-0.642806.794405.60070K562GRSF1
ZNRD1-AS1ENSG00000204623.4506.01930901.85340-0.833704.172102.58070K562HNRNPA2B1
ZNRD1-AS1ENSG00000204623.4821.077501110.15390-0.435202.928902.11150K562HSPD1
ZNRD1-AS1ENSG00000204623.4395.88100648.45770-0.711905.284803.67990K562IGF2BP2
ZNRD1-AS1ENSG00000204623.4496.87230659.58230-0.408702.860801.64370K562IGF2BP3
ZNRD1-AS1ENSG00000204623.4611.152901313.17030-1.1034013.6626011.36700K562KIF1C
ZNRD1-AS1ENSG00000204623.4443.15070681.53570-0.621006.158304.88230K562MAGOH
ZNRD1-AS1ENSG00000204623.4592.451301256.96960-1.0852018.3119014.95620K562MAK16
ZNRD1-AS1ENSG00000204623.4689.901801471.07260-1.0924022.5356019.67700K562MBNL1
ZNRD1-AS1ENSG00000204623.4494.42910679.24130-0.458203.406802.43080K562METAP2
ZNRD1-AS1ENSG00000204623.41092.875601418.65160-0.376403.087601.89040K562MSI2
ZNRD1-AS1ENSG00000204623.4419.807501031.10910-1.2964015.7730013.12300K562NAA15
ZNRD1-AS1ENSG00000204623.4286.07100524.40950-0.874307.420905.13390K562NONO
ZNRD1-AS1ENSG00000204623.4309.69880558.43450-0.850507.109504.30030K562PA2G4
ZNRD1-AS1ENSG00000204623.4328.18550504.92670-0.621603.862901.69660K562PABPC4
ZNRD1-AS1ENSG00000204623.4504.84410788.94180-0.644102.629601.67060K562PABPN1
ZNRD1-AS1ENSG00000204623.4336.21570504.31660-0.584903.624001.50130K562PES1
ZNRD1-AS1ENSG00000204623.4623.53490929.39270-0.575804.811203.68420K562PPIG
ZNRD1-AS1ENSG00000204623.4209.84770517.98080-1.3036014.3999012.67590K562PRPF8
ZNRD1-AS1ENSG00000204623.4349.47520481.05630-0.461002.415901.57640K562PSIP1
ZNRD1-AS1ENSG00000204623.4461.76700662.15220-0.520004.719703.87460K562PTBP1
ZNRD1-AS1ENSG00000204623.41052.646601452.15800-0.464204.511403.47460K562PUF60
ZNRD1-AS1ENSG00000204623.41220.107601513.40010-0.310803.198802.16740K562PUM2
ZNRD1-AS1ENSG00000204623.4304.888701227.22080-2.0090047.6328045.31520K562PUS1
ZNRD1-AS1ENSG00000204623.4421.615301195.62180-1.5038040.3536037.98270K562RBM15
ZNRD1-AS1ENSG00000204623.4368.13010634.94250-0.786408.246606.68690K562RBM22
ZNRD1-AS1ENSG00000204623.4276.71620453.09420-0.711404.437802.69350K562RBM25
ZNRD1-AS1ENSG00000204623.4324.31810527.64300-0.702204.737403.66610K562RPS19
ZNRD1-AS1ENSG00000204623.4297.70860529.63700-0.831105.514703.64420K562RRP9
ZNRD1-AS1ENSG00000204623.4367.19560721.55080-0.974604.532402.87780K562SF1
ZNRD1-AS1ENSG00000204623.4465.71020828.58940-0.831203.710302.20720K562SNRNP200
ZNRD1-AS1ENSG00000204623.4285.35350649.12630-1.1857017.5271015.76870K562SRSF1
ZNRD1-AS1ENSG00000204623.4409.70860613.04200-0.581404.689103.25790K562SRSF5
ZNRD1-AS1ENSG00000204623.4353.24130501.55540-0.505802.777101.75950K562SUPV3L1
ZNRD1-AS1ENSG00000204623.4478.02100656.96600-0.458703.166002.40890K562TARDBP
ZNRD1-AS1ENSG00000204623.4670.26050497.842900.428903.021701.35550K562TBRG4
ZNRD1-AS1ENSG00000204623.4692.02160911.06350-0.396703.993102.46640K562TROVE2
ZNRD1-AS1ENSG00000204623.4638.958301244.12750-0.961306.541504.34420K562UTP18
ZNRD1-AS1ENSG00000204623.4402.08690540.48870-0.426802.403801.30180K562XRN2
ZNRD1-AS1ENSG00000204623.4839.403901206.83020-0.523805.494804.21060K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNRD1-AS1 is not available on ENCORE database.





2 RBPs can affect the splicing of ZNRD1-AS1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNRD1-AS1ENSG00000204623.4chr6-3002486730025494300035403000376030025891300259670.172000.002740.05950includedK562AGGF1
RIZNRD1-AS1ENSG00000204623.4chr6-3002851730028966300285173002877230028881300289660.204000.000720.04721includedK562EIF4G2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNRD1-AS1 is not avaliable on ENCORE database.