YEATS4

General Information

Gene Name       : YEATS4
Gene ID             : ENSG00000127337.6
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: YEATS4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878YEATS4ENSG00000127337.630.7925.4728.13ENCSR000AEF
HepG2YEATS4ENSG00000127337.614.0530.8422.45ENCSR985KAT
K562YEATS4ENSG00000127337.632.6733.0732.87ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for YEATS4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • YEATS4 RNA is bound by 7 proteins.  







eCLIP assay for YEATS4 is not avaliable on ENCORE database.





7 proteins are bound to YEATS4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr126978444369784483+3'-UTR5.491567.11441K562PUM2
chr126978449669784562+3'-UTR4.6188218.21914K562PUM2
chr126978436469784422+3'-UTR4.548657.35577K562PUM2
chr126975940269759514+3'-UTR,CDS,intron-Distal,intron-Proximal4.780523.37579K562EFTUD2
chr126975377769753860+5'-UTR,CDS,intron-Proximal5.8565911.12141HepG2PRPF8
chr126975355069753601+5'-UTR3.980844.08283K562DDX3X
chr126975348769753680+5'-UTR3.914943.45994HepG2NCBP2
chr126977115969771244+intron-Distal4.7615710.59221K562PTBP1
chr126976501069765096+intron-Distal3.488774.72639K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for YEATS4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for YEATS4 is not available on ENCORE database.

  • 114 RBPs can affect the levels of YEATS4.  








The Knockdown/knockout RNA-Seq assay for YEATS4 is not available on ENCORE database.





114 RBPs can affect the gene expression of YEATS4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
YEATS4ENSG00000127337.2228.67590371.90020-0.701606.111905.01290HepG2AKAP8L
YEATS4ENSG00000127337.2302.75500491.08410-0.697804.881503.85140HepG2ASCC1
YEATS4ENSG00000127337.2398.64640699.36420-0.8109010.151308.97250HepG2AUH
YEATS4ENSG00000127337.2256.57740389.55420-0.602402.981802.00540HepG2BCCIP
YEATS4ENSG00000127337.2202.17210338.49010-0.743504.095203.02140HepG2BCLAF1
YEATS4ENSG00000127337.2206.77920468.37480-1.1796012.5679011.41460HepG2BOP1
YEATS4ENSG00000127337.2490.13570679.64140-0.471602.480301.56410HepG2CCAR1
YEATS4ENSG00000127337.2259.80600370.08900-0.510403.863403.10280HepG2CKAP4
YEATS4ENSG00000127337.2193.45610429.98920-1.1523010.878409.61120HepG2CPSF6
YEATS4ENSG00000127337.2400.21770564.85300-0.497104.639103.84540HepG2CELF1
YEATS4ENSG00000127337.2476.24430607.45670-0.351103.340102.53870HepG2DAZAP1
YEATS4ENSG00000127337.2428.27630568.55980-0.408802.119401.56490HepG2DDX3X
YEATS4ENSG00000127337.2236.29040383.01380-0.696803.759702.87430HepG2DDX55
YEATS4ENSG00000127337.2321.44080472.72220-0.556403.693502.53160HepG2DDX5
YEATS4ENSG00000127337.2285.24670488.31750-0.775605.311604.48130HepG2DDX6
YEATS4ENSG00000127337.2198.64750328.21150-0.724405.174604.24110HepG2DNAJC21
YEATS4ENSG00000127337.2228.97130325.37720-0.506903.039502.36190HepG2DNAJC2
YEATS4ENSG00000127337.2233.52650469.51790-1.007608.550807.54510HepG2EIF2S1
YEATS4ENSG00000127337.2372.46020518.91430-0.478402.573901.95670HepG2EIF4A3
YEATS4ENSG00000127337.2339.06520505.15610-0.575202.792502.10080HepG2EIF4B
YEATS4ENSG00000127337.2643.09480802.90650-0.320202.577201.99310HepG2ETF1
YEATS4ENSG00000127337.2227.48010430.73530-0.921103.463002.32280HepG2FTO
YEATS4ENSG00000127337.2144.88280305.21470-1.074902.260601.54370HepG2FUBP3
YEATS4ENSG00000127337.2249.69170364.00800-0.543802.411601.36440HepG2FUS
YEATS4ENSG00000127337.2251.64360485.63040-0.948507.955606.85860HepG2G3BP1
YEATS4ENSG00000127337.2288.18310487.41420-0.758205.273504.40810HepG2GPKOW
YEATS4ENSG00000127337.2432.84060558.22140-0.367002.919701.96320HepG2HNRNPA2B1
YEATS4ENSG00000127337.2176.67710368.59410-1.060907.289206.20560HepG2HNRNPC
YEATS4ENSG00000127337.2269.82700387.90650-0.523703.695402.87660HepG2HNRNPF
YEATS4ENSG00000127337.2292.46780491.58930-0.749205.685804.71280HepG2HNRNPK
YEATS4ENSG00000127337.2414.29320553.37720-0.417604.056903.25330HepG2HNRNPL
YEATS4ENSG00000127337.2295.77220465.14950-0.653204.308303.53830HepG2HNRNPLL
YEATS4ENSG00000127337.2278.32050366.15560-0.395702.176401.63190HepG2HNRNPU
YEATS4ENSG00000127337.2271.33680381.97960-0.493403.001502.24970HepG2IGF2BP1
YEATS4ENSG00000127337.2275.04680493.65640-0.843806.872405.85390HepG2IGF2BP2
YEATS4ENSG00000127337.2318.98910496.48970-0.638303.498602.35490HepG2KHSRP
YEATS4ENSG00000127337.2496.01730717.37000-0.532303.166502.27540HepG2LARP4
YEATS4ENSG00000127337.2208.14490396.99100-0.931507.929606.62550HepG2MSI2
YEATS4ENSG00000127337.2320.85800538.99000-0.748305.331004.46660HepG2NCBP2
YEATS4ENSG00000127337.2209.39470351.71190-0.748203.024001.87860HepG2NONO
YEATS4ENSG00000127337.2316.43810480.08270-0.601402.831802.10280HepG2PABPC4
YEATS4ENSG00000127337.2326.53150497.90070-0.608605.888905.05640HepG2PCBP1
YEATS4ENSG00000127337.2121.01030295.45900-1.287809.454108.06200HepG2PRPF8
YEATS4ENSG00000127337.2320.96300506.62630-0.658506.455105.68770HepG2PTBP1
YEATS4ENSG00000127337.2377.05420574.96530-0.608705.284004.49270HepG2PUF60
YEATS4ENSG00000127337.2441.42740610.31820-0.467405.218304.45680HepG2PUM1
YEATS4ENSG00000127337.2490.24220609.89280-0.315102.125201.53360HepG2PUM2
YEATS4ENSG00000127337.2412.97560548.70210-0.410002.857702.22510HepG2QKI
YEATS4ENSG00000127337.2483.26650332.556400.539102.089501.46940HepG2RAVER1
YEATS4ENSG00000127337.2469.09210671.09320-0.516604.677104.04890HepG2RBM22
YEATS4ENSG00000127337.2388.97920497.97740-0.356402.041301.45620HepG2RBM25
YEATS4ENSG00000127337.2233.55530417.83480-0.839206.649205.65500HepG2RPLP0
YEATS4ENSG00000127337.2151.74510279.52780-0.881305.781904.93130HepG2RPS19
YEATS4ENSG00000127337.2292.90090413.54600-0.497602.475901.46090HepG2RPS5
YEATS4ENSG00000127337.2168.17160292.26960-0.797404.086503.15210HepG2RRP9
YEATS4ENSG00000127337.2187.83230326.06520-0.795705.914105.02680HepG2SAFB2
YEATS4ENSG00000127337.2155.51770280.56440-0.851305.020503.76470HepG2SERBP1
YEATS4ENSG00000127337.2399.61810527.47460-0.400502.957502.35010HepG2SF3B4
YEATS4ENSG00000127337.2380.02190551.23460-0.536605.741104.79170HepG2SLBP
YEATS4ENSG00000127337.2244.66160563.12540-1.202704.217502.52310HepG2SNRNP200
YEATS4ENSG00000127337.2305.18310512.27730-0.747303.992003.04500HepG2SNRNP70
YEATS4ENSG00000127337.2299.59110757.99610-1.3392020.8284019.78780HepG2SRFBP1
YEATS4ENSG00000127337.2674.89870550.564700.293701.984001.56530HepG2SRSF1
YEATS4ENSG00000127337.2367.37280567.65510-0.627807.072506.13560HepG2SRSF5
YEATS4ENSG00000127337.2216.75520381.09710-0.814107.600506.54030HepG2SRSF7
YEATS4ENSG00000127337.2263.99290447.90980-0.762708.462107.59040HepG2SRSF9
YEATS4ENSG00000127337.2523.07010658.15690-0.331402.539002.04240HepG2SSB
YEATS4ENSG00000127337.2211.47700327.63530-0.631603.344601.99170HepG2STAU1
YEATS4ENSG00000127337.2456.27900645.61390-0.500805.658004.82660HepG2SUCLG1
YEATS4ENSG00000127337.2141.68160331.22040-1.2251012.2469010.39770HepG2SUPT6H
YEATS4ENSG00000127337.2213.54150381.28290-0.836304.966204.10110HepG2SUPV3L1
YEATS4ENSG00000127337.2236.79860453.40850-0.937208.184807.02500HepG2TARDBP
YEATS4ENSG00000127337.2148.55910255.55960-0.782603.414702.31840HepG2TFIP11
YEATS4ENSG00000127337.2340.92970454.71900-0.415502.627401.81190HepG2TIA1
YEATS4ENSG00000127337.2158.95800355.70890-1.162109.875609.03370HepG2TIAL1
YEATS4ENSG00000127337.2516.88610333.894000.630403.331201.72850HepG2TRA2A
YEATS4ENSG00000127337.2176.04530358.97420-1.027908.070007.18580HepG2TRIM56
YEATS4ENSG00000127337.2401.23460561.66300-0.485303.667402.64530HepG2TUFM
YEATS4ENSG00000127337.2328.37310655.73000-0.997802.838801.83680HepG2U2AF2
YEATS4ENSG00000127337.2361.62600594.47620-0.717105.119103.96150HepG2UBE2L3
YEATS4ENSG00000127337.295.80650225.23450-1.233208.281706.96890HepG2UCHL5
YEATS4ENSG00000127337.2223.61200400.09030-0.839308.775607.65060HepG2UPF1
YEATS4ENSG00000127337.2215.77730324.27460-0.587704.265303.45970HepG2ZC3H8
YEATS4ENSG00000127337.2258.39270440.01990-0.768008.074807.26770HepG2ZNF622
YEATS4ENSG00000127337.2638.183101175.77860-0.8816011.3006010.23260K562AQR
YEATS4ENSG00000127337.2423.75440678.50180-0.679104.267003.17510K562BOP1
YEATS4ENSG00000127337.2836.014001191.55630-0.511202.520401.51580K562CNOT7
YEATS4ENSG00000127337.2807.380901061.76360-0.395104.189102.80470K562CPEB4
YEATS4ENSG00000127337.2462.57180721.46020-0.641206.453805.25610K562CPSF6
YEATS4ENSG00000127337.2461.84260620.00340-0.424903.014801.92650K562DDX3X
YEATS4ENSG00000127337.2827.223801098.57650-0.409305.000904.16100K562DDX47
YEATS4ENSG00000127337.2332.75400480.11350-0.528903.357202.34830K562EFTUD2
YEATS4ENSG00000127337.2598.48100778.00870-0.378502.943702.20540K562EIF2S2
YEATS4ENSG00000127337.2279.46160514.08830-0.879406.946505.20250K562EIF3D
YEATS4ENSG00000127337.2489.23520633.83550-0.373603.005702.17570K562EIF3G
YEATS4ENSG00000127337.2422.21840647.76450-0.617505.469104.31840K562EIF4A3
YEATS4ENSG00000127337.2532.88630734.03350-0.462003.184802.26190K562FMR1
YEATS4ENSG00000127337.2441.77690622.14430-0.493903.242502.24690K562FTO
YEATS4ENSG00000127337.2456.51890611.10770-0.420803.381601.39100K562FUBP3
YEATS4ENSG00000127337.2498.37500673.65020-0.434803.764303.07510K562FXR1
YEATS4ENSG00000127337.21032.44680658.700000.648304.910203.90590K562G3BP2
YEATS4ENSG00000127337.2453.00650688.83150-0.604605.392904.29070K562GPKOW
YEATS4ENSG00000127337.2275.63760695.20500-1.3347020.7823019.22050K562HNRNPC
YEATS4ENSG00000127337.2451.88500620.86380-0.458303.284202.03190K562HNRNPF
YEATS4ENSG00000127337.2745.06520992.83830-0.414203.609602.38120K562HNRNPL
YEATS4ENSG00000127337.21304.02760966.971600.431303.539902.64270K562HSPD1
YEATS4ENSG00000127337.2426.21740588.13810-0.464602.224301.39730K562KRR1
YEATS4ENSG00000127337.2623.84340901.40210-0.531005.366604.18240K562MAGOH
YEATS4ENSG00000127337.21608.452301277.070600.332702.970902.01900K562MBNL1
YEATS4ENSG00000127337.2472.04230672.37030-0.510303.256702.30480K562METAP2
YEATS4ENSG00000127337.2501.87700646.81270-0.366002.485701.32220K562NCBP2
YEATS4ENSG00000127337.2697.38490913.03790-0.388704.875203.92380K562NSUN2
YEATS4ENSG00000127337.2737.287901144.73460-0.634703.953202.45580K562PABPC1
YEATS4ENSG00000127337.2487.20860802.05320-0.719207.932106.24610K562PCBP2
YEATS4ENSG00000127337.2375.79170512.18830-0.446702.436001.65770K562PCBP3
YEATS4ENSG00000127337.2296.72900392.85250-0.404802.169901.46090K562POLR2G
YEATS4ENSG00000127337.2467.62900623.33660-0.414602.422301.58140K562PSIP1
YEATS4ENSG00000127337.2647.27680875.75690-0.436104.030003.24250K562PTBP1
YEATS4ENSG00000127337.21107.189301519.62600-0.456804.842703.76620K562PUF60
YEATS4ENSG00000127337.21329.770301583.70710-0.252102.470901.56270K562PUM2
YEATS4ENSG00000127337.2526.97050839.83160-0.672407.161105.72970K562RBM22
YEATS4ENSG00000127337.2361.38110568.77400-0.654305.710104.27840K562RCC2
YEATS4ENSG00000127337.2674.62270883.76850-0.389602.692501.61590K562NELFE
YEATS4ENSG00000127337.2328.17620490.52020-0.579803.432102.30600K562RPS3
YEATS4ENSG00000127337.2694.546501085.32170-0.644003.812901.94800K562SBDS
YEATS4ENSG00000127337.2484.05580935.69140-0.950903.860502.36940K562SF1
YEATS4ENSG00000127337.2621.16650900.89870-0.536406.690105.47070K562SF3A3
YEATS4ENSG00000127337.2487.79350655.05030-0.425302.332701.44760K562SF3B1
YEATS4ENSG00000127337.2489.63240685.32830-0.485104.317903.24330K562SF3B4
YEATS4ENSG00000127337.2348.63770539.17630-0.629003.512202.32020K562SRFBP1
YEATS4ENSG00000127337.2317.86830452.39700-0.509202.666501.66910K562SUPV3L1
YEATS4ENSG00000127337.2541.41380868.91220-0.682506.902105.73540K562TARDBP
YEATS4ENSG00000127337.2350.47870599.53830-0.774506.575205.07750K562TIAL1
YEATS4ENSG00000127337.2419.96770636.99900-0.601004.951403.59820K562TRIM56
YEATS4ENSG00000127337.21314.662501713.47420-0.382203.793702.13840K562UBE2L3
YEATS4ENSG00000127337.2329.23170478.78560-0.540303.285102.17180K562UCHL5
YEATS4ENSG00000127337.2671.02760968.11150-0.528807.422306.31500K562UPF1
YEATS4ENSG00000127337.2685.47330861.40300-0.329603.423202.49000K562WDR43
YEATS4ENSG00000127337.2942.838001324.51250-0.490405.054303.83330K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for YEATS4 is not available on ENCORE database.





4 RBPs can affect the splicing of YEATS4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEYEATS4ENSG00000127337.2chr12+6975795669758079697565676975668769759412697594790.059000.002510.06326includedK562AKAP8L
SEYEATS4ENSG00000127337.2chr12+697595696975966469756567697566876976448569764578-0.106000.000330.01320excludedK562AKAP8L
SEYEATS4ENSG00000127337.2chr12+697595696975966469756567697566876976448569764578-0.158000.000390.00548excludedK562AQR
SEYEATS4ENSG00000127337.2chr12+697594126975947969756567697566876976448569764578-0.215000.000300.01464excludedK562HNRNPU
SEYEATS4ENSG00000127337.2chr12+697595696975966469756567697566876976448569764578-0.145000.000000.00009excludedK562AGGF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for YEATS4 is not avaliable on ENCORE database.