YAP1

General Information

Gene Name       : YAP1
Gene ID             : ENSG00000137693.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: YAP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878YAP1ENSG00000137693.130.000.000.00ENCSR000AEF
HepG2YAP1ENSG00000137693.13101.2285.9793.59ENCSR985KAT
K562YAP1ENSG00000137693.130.030.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for YAP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • YAP1 RNA is bound by 34 proteins.  







eCLIP assay for YAP1 is not avaliable on ENCORE database.





34 proteins are bound to YAP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11102103004102103074+3'-UTR4.2519412.15373HepG2FAM120A
chr11102101488102101516+3'-UTR3.691334.59124HepG2FUBP3
chr11102103819102103912+3'-UTR4.200403.15232HepG2LIN28B
chr11102101404102101465+3'-UTR4.123896.93029HepG2GTF2F1
chr11102101401102101470+3'-UTR4.6264021.28620HepG2FUBP3
chr11102101404102101465+3'-UTR4.1041030.81799HepG2FAM120A
chr11102101377102101468+3'-UTR4.1817816.23545HepG2PRPF4
chr11102101401102101471+3'-UTR3.1624610.67861HepG2PCBP2
chr11102101408102101461+3'-UTR3.831193.27788HepG2IGF2BP3
chr11102101405102101461+3'-UTR3.888326.30718HepG2RBFOX2
chr11102103021102103066+3'-UTR3.802534.67754HepG2FUBP3
chr11102103349102103416+3'-UTR3.395907.63447HepG2FUBP3
chr11102101402102101463+3'-UTR6.3976622.62610HepG2TIA1
chr11101981390101981483+5'-UTR3.1836430.60022HepG2DDX3X
chr11101981214101981282+5'-UTR3.407888.19027HepG2NCBP2
chr11101981367101981473+5'-UTR3.018644.07680HepG2NCBP2
chr11101981483101981618+5'-UTR,CDS3.4123521.30975HepG2DDX3X
chr11101985054101985125+5'-UTR,CDS3.902564.91603HepG2LIN28B
chr11102033245102033308+CDS,intron-Proximal3.577738.95550HepG2GRWD1
chr11102056734102056801+CDS,intron-Distal,intron-Proximal3.7983727.51459HepG2U2AF2
chr11102094342102094403+CDS,intron-Proximal3.400396.61645HepG2BUD13
chr11102076721102076800+CDS3.776477.06029HepG2GRWD1
chr11102076795102076858+CDS,intron-Proximal3.7358710.64040HepG2PRPF8
chr11101981853101981902+CDS,intron-Proximal3.161697.04499HepG2GRWD1
chr11102056835102056899+CDS,intron-Distal,intron-Proximal4.3027510.59198HepG2PRPF8
chr11102056739102056792+CDS,intron-Distal,intron-Proximal3.777934.62802HepG2U2AF1
chr11102094468102094521+CDS,intron-Proximal4.751687.13970HepG2PRPF8
chr11101981686101981722+CDS4.497406.83552HepG2DDX3X
chr11102033245102033303+CDS,intron-Proximal4.054223.70369HepG2LIN28B
chr11102100496102100582+CDS3.517716.13978HepG2PPIG
chr11102094412102094443+CDS3.028213.94162HepG2BUD13
chr11102094350102094443+CDS,intron-Proximal3.017924.08504HepG2G3BP1
chr11102056746102056785+CDS,intron-Distal,intron-Proximal4.100897.49899HepG2PPIG
chr11101981681101981710+CDS3.393963.93645HepG2PPIG
chr11102033281102033338+CDS,intron-Proximal4.4148549.22376HepG2PRPF8
chr11101981898101981969+CDS,intron-Proximal5.139636.74224HepG2AQR
chr11102057232102057285+intron-Distal4.487833.70058HepG2XPO5
chr11102002219102002291+intron-Distal4.602144.66899HepG2HNRNPM
chr11102035790102035859+intron-Distal5.6617812.29377HepG2ILF3
chr11101982692101982749+intron-Distal3.425093.66782HepG2HNRNPM
chr11101985339101985448+intron-Distal4.062963.15106HepG2HNRNPC
chr11101993011101993093+intron-Distal4.673146.39345HepG2ILF3
chr11102078906102078971+intron-Distal3.341836.91567HepG2QKI
chr11102061468102061562+intron-Distal3.404663.40404HepG2ILF3
chr11101982233101982287+intron-Distal3.301963.14777HepG2GTF2F1
chr11102018572102018654+intron-Distal4.587289.85601HepG2QKI
chr11102044672102044722+intron-Distal3.999813.00241HepG2SFPQ
chr11102068624102068674+intron-Distal3.344863.66782HepG2HNRNPM
chr11102017293102017366+intron-Distal5.9282014.55065HepG2QKI
chr11101982215101982288+intron-Distal3.277077.53430HepG2NKRF
chr11101999671101999743+intron-Distal4.293134.33022HepG2HNRNPK
chr11102094540102094611+intron-Distal,intron-Proximal4.654686.46110HepG2KHSRP
chr11102025514102025612+intron-Distal4.5299610.47376HepG2QKI
chr11101982222101982283+intron-Distal3.575447.95421HepG2FAM120A
chr11101989208101989218+intron-Distal3.032683.92083HepG2ILF3
chr11101981999101982057+intron-Distal,intron-Proximal4.593606.67793HepG2EFTUD2
chr11101981936101982053+intron-Distal,intron-Proximal3.521876.01432HepG2PRPF4
chr11102047541102047652+intron-Distal3.800264.48600HepG2HNRNPU
chr11102035441102035503+intron-Distal4.204973.55542HepG2TIAL1
chr11102048027102048146+intron-Distal3.803674.88774HepG2TAF15
chr11102045037102045092+intron-Distal3.077808.99529HepG2U2AF2
chr11102033435102033516+intron-Distal3.403015.40161HepG2KHSRP
chr11102075752102075834+intron-Distal4.7535715.00987HepG2QKI
chr11101982319101982407+intron-Distal3.737563.96999HepG2CSTF2T
chr11102007105102007138+intron-Distal3.318064.41834HepG2HNRNPC
chr11101989255101989318+intron-Distal3.132787.57998HepG2ILF3
chr11102007089102007105+intron-Distal3.270484.02778HepG2HNRNPC
chr11101989218101989255+intron-Distal3.375675.77775HepG2ILF3
chr11102018545102018572+intron-Distal4.232044.51735HepG2QKI
chr11102029425102029499+intron-Distal4.931316.12104HepG2QKI
chr11102053993102054054+intron-Distal3.911743.65892HepG2TAF15
chr11102071876102071974+intron-Distal4.955776.38584HepG2QKI
chr11102057580102057676+intron-Distal4.239223.73609HepG2KHSRP
chr11102046879102046966+intron-Distal3.128813.06005HepG2QKI
chr11102051734102051807+intron-Distal3.829113.00349HepG2ILF3
chr11102007875102007943+intron-Distal3.202795.11767HepG2QKI
chr11102035295102035378+intron-Distal4.546824.83283HepG2KHSRP
chr11101999657101999713+intron-Distal5.2658938.27645HepG2PCBP2
chr11102075666102075707+intron-Distal3.847904.33990HepG2QKI
chr11102091740102091852+intron-Distal3.532735.12739HepG2TAF15
chr11102035859102035877+intron-Distal4.051503.37208HepG2ILF3
chr11101982329101982416+intron-Distal3.178714.73383HepG2HNRNPM
chr11101988770101988826+intron-Distal3.264243.81210HepG2KHSRP
chr11101999713101999780+intron-Distal5.5291344.16166HepG2PCBP2
chr11102049783102049853+intron-Distal3.749156.05875HepG2HNRNPK
chr11101982537101982624+intron-Distal3.674869.70979HepG2PCBP2
chr11102035963102036030+intron-Distal4.6254210.62519HepG2ILF3
chr11102024473102024540+intron-Distal3.133844.20080HepG2QKI
chr11102035308102035410+intron-Distal3.262184.25713HepG2U2AF2
chr11102052358102052466+intron-Distal3.291524.40876HepG2CSTF2
chr11102012451102012545+intron-Distal3.484864.43994HepG2U2AF2
chr11101981951101981978+intron-Proximal4.730264.61663HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for YAP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for YAP1 is not available on ENCORE database.

  • 98 RBPs can affect the levels of YAP1.  








The Knockdown/knockout RNA-Seq assay for YAP1 is not available on ENCORE database.





98 RBPs can affect the gene expression of YAP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
YAP1ENSG00000137693.95708.630703387.214500.7529035.2616033.68310HepG2ACO1
YAP1ENSG00000137693.95569.935704526.309800.299201.928301.47490HepG2AKAP1
YAP1ENSG00000137693.93130.981802404.396100.380802.925601.85950HepG2AKAP8
YAP1ENSG00000137693.95326.617503745.159200.508105.613604.51640HepG2ASCC1
YAP1ENSG00000137693.91764.005303101.59150-0.8142014.8438013.61080HepG2BOP1
YAP1ENSG00000137693.95914.381803558.153300.7330011.5330010.05960HepG2CIRBP
YAP1ENSG00000137693.94127.153103386.850800.285106.089405.17330HepG2CKAP4
YAP1ENSG00000137693.94658.263303414.122400.448202.484001.76340HepG2CNOT7
YAP1ENSG00000137693.91683.836302847.47820-0.7579011.8116010.50320HepG2CPSF6
YAP1ENSG00000137693.96447.285105280.694100.287904.582003.79130HepG2CELF1
YAP1ENSG00000137693.93438.608505678.39690-0.7237038.4674036.35140HepG2DAZAP1
YAP1ENSG00000137693.92483.511203132.85930-0.335106.267205.08650HepG2DDX19B
YAP1ENSG00000137693.92907.226703848.43950-0.404607.013205.27790HepG2DDX1
YAP1ENSG00000137693.92210.359704335.90080-0.9721016.9559015.54710HepG2DDX3X
YAP1ENSG00000137693.92959.359203639.64820-0.298502.744401.76260HepG2DHX30
YAP1ENSG00000137693.92685.251203240.74270-0.271304.012303.22610HepG2DKC1
YAP1ENSG00000137693.92072.741803773.61220-0.8644028.9234026.92990HepG2DNAJC21
YAP1ENSG00000137693.92365.733803740.29840-0.6609027.5806025.72390HepG2DNAJC2
YAP1ENSG00000137693.91947.707002582.89730-0.407203.667502.38120HepG2EFTUD2
YAP1ENSG00000137693.91612.820803580.57850-1.1506022.7998021.20450HepG2EIF2S1
YAP1ENSG00000137693.94276.777703486.179000.294803.102901.96290HepG2EIF3G
YAP1ENSG00000137693.92501.911203957.00350-0.661407.243606.20990HepG2EIF4A3
YAP1ENSG00000137693.92273.991003852.61550-0.760607.410506.31560HepG2EIF4B
YAP1ENSG00000137693.93319.213505601.78190-0.7550030.5335028.39210HepG2EIF4G1
YAP1ENSG00000137693.94055.244102966.932200.450705.390203.91380HepG2ESF1
YAP1ENSG00000137693.98714.102306704.587900.378109.425608.42500HepG2ETF1
YAP1ENSG00000137693.93925.269703310.244300.245802.210401.46380HepG2EWSR1
YAP1ENSG00000137693.94744.952303458.207400.456304.259503.32080HepG2FIP1L1
YAP1ENSG00000137693.91734.247602852.25850-0.717803.136802.05330HepG2FTO
YAP1ENSG00000137693.92749.878801831.448900.586308.880507.51320HepG2FUBP3
YAP1ENSG00000137693.95373.206103992.319500.428504.142403.30770HepG2FXR1
YAP1ENSG00000137693.95705.411903931.682500.537106.446105.07840HepG2G3BP2
YAP1ENSG00000137693.92825.892602239.392500.335502.663501.78460HepG2GEMIN5
YAP1ENSG00000137693.92504.940903809.76450-0.6049010.007808.89070HepG2HNRNPA1
YAP1ENSG00000137693.91739.800104237.66150-1.2843038.2798036.04310HepG2HNRNPC
YAP1ENSG00000137693.92404.144203686.32990-0.6167018.2610016.62830HepG2HNRNPF
YAP1ENSG00000137693.95387.734203749.999300.522706.928605.86070HepG2HNRNPK
YAP1ENSG00000137693.94633.824505172.69240-0.158702.680202.01630HepG2HNRNPL
YAP1ENSG00000137693.92091.964603080.50000-0.558306.497005.57700HepG2HNRNPLL
YAP1ENSG00000137693.93585.362602386.264800.5873010.234508.61730HepG2HNRNPM
YAP1ENSG00000137693.92994.660504209.64440-0.4913013.2007011.95220HepG2HNRNPU
YAP1ENSG00000137693.91341.145102618.49220-0.9653012.248309.77360HepG2HSPD1
YAP1ENSG00000137693.92019.735103629.96970-0.8458021.9955020.18790HepG2IGF2BP1
YAP1ENSG00000137693.93397.530604300.01190-0.339909.242007.98080HepG2ILF2
YAP1ENSG00000137693.92115.373703328.15560-0.653805.197003.35950HepG2ILF3
YAP1ENSG00000137693.92235.993303251.84850-0.540304.524002.94670HepG2KHDRBS1
YAP1ENSG00000137693.92261.528503096.57040-0.453407.991506.32420HepG2KIF1C
YAP1ENSG00000137693.91821.016302616.20550-0.522703.799102.32310HepG2KRR1
YAP1ENSG00000137693.92275.519903993.71270-0.8115012.0532010.71920HepG2MAGOH
YAP1ENSG00000137693.93445.053102799.244100.299403.171702.30810HepG2MSI2
YAP1ENSG00000137693.92313.409804110.70500-0.8294011.9671010.69230HepG2NCBP2
YAP1ENSG00000137693.91855.051403512.61020-0.921106.263804.58180HepG2NONO
YAP1ENSG00000137693.95315.591103543.116100.5851019.0178017.65900HepG2PCBP1
YAP1ENSG00000137693.92499.745203715.21070-0.571704.721602.55880HepG2PHF6
YAP1ENSG00000137693.92950.462603754.66590-0.347705.363804.36730HepG2PPIL4
YAP1ENSG00000137693.91998.806302822.14600-0.4977010.951009.56130HepG2PRPF4
YAP1ENSG00000137693.92237.246602952.91620-0.400402.229401.50150HepG2PRPF8
YAP1ENSG00000137693.96097.026003605.342800.7579030.7130029.28320HepG2PTBP1
YAP1ENSG00000137693.94104.074305374.86670-0.389204.960404.19000HepG2PUF60
YAP1ENSG00000137693.98608.482505705.543000.5933024.3898022.98560HepG2PUM1
YAP1ENSG00000137693.94363.550705701.44710-0.385806.096205.11310HepG2PUM2
YAP1ENSG00000137693.94511.019103450.152200.386709.621908.58970HepG2PUS1
YAP1ENSG00000137693.94528.034103904.484100.213702.304301.72460HepG2QKI
YAP1ENSG00000137693.912848.329204271.491901.5887021.3518019.57220HepG2RAVER1
YAP1ENSG00000137693.97858.340605603.778200.4877011.6596010.75020HepG2RBM22
YAP1ENSG00000137693.92600.887603790.07310-0.543203.695502.46890HepG2RCC2
YAP1ENSG00000137693.94735.434304012.325800.239003.700503.09260HepG2NELFE
YAP1ENSG00000137693.96008.699003737.071400.6850026.7347025.16750HepG2RECQL
YAP1ENSG00000137693.92161.552503971.27280-0.8775018.5739017.11670HepG2RPLP0
YAP1ENSG00000137693.93111.441304195.71820-0.431302.457801.56730HepG2RPS10
YAP1ENSG00000137693.93320.626504304.74210-0.374503.204902.34340HepG2RPS2
YAP1ENSG00000137693.92058.377903427.02070-0.735407.103705.83230HepG2RPS3A
YAP1ENSG00000137693.92675.859304393.97170-0.7155010.057208.03160HepG2RPS5
YAP1ENSG00000137693.92375.708703748.87280-0.6581024.8891023.22490HepG2SAFB2
YAP1ENSG00000137693.94966.525103581.856800.471403.278902.54330HepG2SF3A3
YAP1ENSG00000137693.94567.534303753.466300.283104.956904.20200HepG2SF3B4
YAP1ENSG00000137693.93794.362304371.81640-0.204403.920303.17700HepG2SMN1
YAP1ENSG00000137693.91850.523404354.74910-1.2347018.1535015.72040HepG2SMNDC1
YAP1ENSG00000137693.96830.750603392.700901.009509.946108.47080HepG2SNRNP70
YAP1ENSG00000137693.98568.614106329.232000.4369014.3921013.48640HepG2SRFBP1
YAP1ENSG00000137693.96383.103003917.871900.7041031.1676029.95820HepG2SRSF1
YAP1ENSG00000137693.95573.675603280.692600.764505.110303.71220HepG2SRSF3
YAP1ENSG00000137693.92439.199303621.74170-0.5703016.1258014.68620HepG2SRSF7
YAP1ENSG00000137693.95001.499203187.454000.6499024.8209023.47690HepG2SRSF9
YAP1ENSG00000137693.93220.129505495.22070-0.7711033.9402032.60380HepG2SSB
YAP1ENSG00000137693.92535.926003809.48370-0.587104.000003.20930HepG2SUPV3L1
YAP1ENSG00000137693.93474.133902553.563500.444004.589403.35380HepG2TFIP11
YAP1ENSG00000137693.91919.603004090.44550-1.0915037.5177036.06460HepG2TIAL1
YAP1ENSG00000137693.94825.391804127.022500.225403.529302.90950HepG2TRIM56
YAP1ENSG00000137693.94551.086502958.497900.621209.060707.91580HepG2U2AF1
YAP1ENSG00000137693.92295.463603489.18580-0.604103.103602.04110HepG2UPF2
YAP1ENSG00000137693.93519.939203066.848200.198702.728802.13500HepG2UTP3
YAP1ENSG00000137693.91813.859003069.51990-0.759007.202605.43510HepG2XPO5
YAP1ENSG00000137693.96149.126604697.411300.388402.283501.32330HepG2XRCC6
YAP1ENSG00000137693.91544.491302785.13700-0.8506036.1724034.28870HepG2ZC3H8
YAP1ENSG00000137693.92607.349603493.60990-0.4221012.4152011.46470HepG2ZNF622
YAP1ENSG00000137693.910.139600.0000099999.999902.528401.81140K562PRPF8
YAP1ENSG00000137693.90.390309.35070-4.582402.380001.71140K562UPF1
YAP1ENSG00000137693.90.000008.31800-99999.999992.644001.81530K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for YAP1 is not available on ENCORE database.





13 RBPs can affect the splicing of YAP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEYAP1ENSG00000137693.9chr11+1020802471020802951020766231020768051020943521020944830.136000.002740.04692includedHepG2U2AF1
SEYAP1ENSG00000137693.9chr11+102056748102056862102033186102033302102076623102076805-0.386000.000000.00000excludedHepG2U2AF1
SEYAP1ENSG00000137693.9chr11+102056748102056862102033186102033302102076623102076805-0.499000.000000.00000excludedHepG2U2AF2
SEYAP1ENSG00000137693.9chr11+102056748102056862102033186102033302102076623102076805-0.082000.002760.09384excludedHepG2SFPQ
SEYAP1ENSG00000137693.9chr11+102080247102080295102076623102076805102094352102094483-0.150000.001160.05786excludedHepG2PTBP1
SEYAP1ENSG00000137693.9chr11+1020802471020802951020766231020768051020943521020944830.224000.000080.00575includedHepG2MATR3
SEYAP1ENSG00000137693.9chr11+102056748102056862102033186102033302102076623102076805-0.288000.000000.00000excludedHepG2SRSF1
SEYAP1ENSG00000137693.9chr11+102056748102056862102033186102033302102076623102076805-0.175000.000000.00019excludedHepG2SF3A3
SEYAP1ENSG00000137693.9chr11+102056748102056862102033186102033302102076623102076805-0.186000.000020.00174excludedHepG2SF3B4
SEYAP1ENSG00000137693.9chr11+1020567481020568621020331861020333021020766231020768050.115000.000680.02850includedHepG2HNRNPC
A5SSYAP1ENSG00000137693.9chr11+1020766231020768171020766231020768051020802471020802950.379000.000000.00146longerHepG2HNRNPL
MXEYAP1ENSG00000137693.9chr11+1020766231020768051020943521020944831020331861020333021020981991020983120.177000.000000.000001includedHepG2U2AF1
MXEYAP1ENSG00000137693.9chr11+102094352102094483102098199102098312102076623102076805102100432102100694-0.087000.004650.075062includedHepG2SRSF1
MXEYAP1ENSG00000137693.9chr11+102094352102094483102098199102098312102080247102080295102100432102101310-0.071000.004090.098082includedHepG2PCBP1
MXEYAP1ENSG00000137693.9chr11+1020331861020333021020567481020568621019848741019851251020766231020768170.150000.000780.028791includedHepG2RBFOX2
MXEYAP1ENSG00000137693.9chr11+102056748102056862102076623102076817102033186102033302102094352102094483-0.161000.001760.056362includedHepG2SF3B4
MXEYAP1ENSG00000137693.9chr11+102094352102094483102098199102098312102076623102076805102100432102100694-0.164000.000220.022832includedHepG2DDX59

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for YAP1 is not avaliable on ENCORE database.