WDTC1

General Information

Gene Name       : WDTC1
Gene ID             : ENSG00000142784.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: WDTC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WDTC1ENSG00000142784.157.9312.9210.43ENCSR000AEF
HepG2WDTC1ENSG00000142784.158.554.896.72ENCSR985KAT
K562WDTC1ENSG00000142784.1521.8518.0719.96ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WDTC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WDTC1 RNA is bound by 22 proteins.  







eCLIP assay for WDTC1 is not avaliable on ENCORE database.





22 proteins are bound to WDTC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12763435327634384+3'-UTR,intron-Distal4.0293513.05157K562ILF3
chr12763465427634671+3'-UTR,intron-Proximal5.1507311.30955K562PABPC4
chr12763467627634704+3'-UTR3.241253.74491K562CSTF2T
chr12763398627634080+3'-UTR,intron-Distal,intron-Proximal3.109319.28267K562UPF1
chr12763296227633092+3'-UTR,intron-Distal,intron-Proximal3.1366028.74081K562UPF1
chr12763466727634706+3'-UTR3.962066.34081K562ILF3
chr12763398427634083+3'-UTR,intron-Distal,intron-Proximal3.4831326.90752K562ILF3
chr12763322727633256+3'-UTR3.752894.87320K562UPF1
chr12763463027634654+3'-UTR,intron-Proximal5.0484911.52455K562PABPC4
chr12763467127634710+3'-UTR5.1009612.17370K562PABPC4
chr12763313427633187+3'-UTR,intron-Proximal3.643724.44179K562METAP2
chr12763438427634422+3'-UTR,intron-Distal3.450189.17422K562ILF3
chr12763457527634634+3'-UTR,intron-Proximal3.7700412.53847K562CSTF2T
chr12763408127634135+3'-UTR,intron-Distal3.693125.34559K562HNRNPK
chr12763457327634667+3'-UTR,intron-Proximal4.7333626.54546K562ILF3
chr12763374227633755+3'-UTR3.504144.14074K562UPF1
chr12763457127634657+3'-UTR,intron-Proximal4.1559814.86163K562UPF1
chr12763407327634111+3'-UTR,intron-Distal4.185483.44037HepG2DDX59
chr12763312827633236+3'-UTR,intron-Proximal5.0410714.34649K562PCBP1
chr12763397727634029+3'-UTR,intron-Proximal4.502127.71013HepG2PCBP2
chr12763371427633755+3'-UTR3.636844.54534K562IGF2BP2
chr12763457127634623+3'-UTR,intron-Proximal5.7276016.52824K562PCBP1
chr12763409327634123+3'-UTR,intron-Distal5.053583.39700HepG2PCBP2
chr12763435327634456+3'-UTR,intron-Distal3.0173010.27316K562UPF1
chr12763379027633853+3'-UTR3.878868.94249K562IGF2BP2
chr12763431627634348+3'-UTR,intron-Distal4.500904.62831HepG2PCBP2
chr12763430127634353+3'-UTR,intron-Distal3.6880010.38208K562ILF3
chr12763379527633842+3'-UTR3.405239.31827K562ILF3
chr12763437927634442+3'-UTR,intron-Distal3.170154.86362K562HNRNPK
chr12763393727634026+3'-UTR,intron-Proximal3.171513.23948HepG2HNRNPK
chr12763394427634081+3'-UTR,intron-Distal,intron-Proximal5.3145536.25173K562PCBP1
chr12763373127633778+3'-UTR3.289035.78681K562ILF3
chr12763394427634081+3'-UTR,intron-Distal,intron-Proximal4.2576310.89777K562HNRNPK
chr12763456727634632+3'-UTR,intron-Proximal4.842676.53456HepG2PCBP2
chr12763466727634697+3'-UTR4.016166.14808K562UPF1
chr12756122127561285+5'-UTR3.709884.89463K562AATF
chr12756116827561288+5'-UTR3.708295.44241K562DROSHA
chr12756120627561287+5'-UTR3.075233.46580HepG2CSTF2T
chr12756122627561301+5'-UTR3.458093.06644K562GTF2F1
chr12756135327561440+5'-UTR4.077685.88953K562DDX3X
chr12758750927587559+5'-UTR,CDS3.754716.78159K562DDX3X
chr12758746627587528+5'-UTR3.085026.32251K562UPF1
chr12758745927587509+5'-UTR4.029497.63469K562DDX3X
chr12756122827561302+5'-UTR4.605276.80282HepG2DDX3X
chr12756121727561276+5'-UTR4.510925.79513HepG2SUB1
chr12756121827561295+5'-UTR3.720349.16267K562CSTF2T
chr12760872427608769+CDS,intron-Proximal4.164684.11693K562BUD13
chr12763010827630169+CDS,intron-Proximal4.321149.46646K562LIN28B
chr12761417327614190+CDS3.156823.68829K562YBX3
chr12762054027620599+CDS5.163254.75872K562DDX24
chr12762447727624534+CDS4.210289.80049K562YBX3
chr12761419027614233+CDS3.248026.20049K562YBX3
chr12762443527624477+CDS3.154716.18483K562YBX3
chr12763264127632708+CDS,intron-Proximal5.616079.41643K562AQR
chr12762794427627952+CDS3.050554.18718K562LIN28B
chr12760992827609940+CDS3.657383.02850K562YBX3
chr12762882527628957+intron-Distal4.937854.79321K562RBFOX2
chr12756190627561967+intron-Distal3.139653.71972K562TARDBP
chr12756147327561490+intron-Proximal3.524095.62171K562AQR
chr12763168427631775+intron-Proximal5.5219213.75908K562AQR
chr12763030627630369+intron-Proximal5.4047512.70303K562AQR
chr12756144227561473+intron-Proximal3.215485.12057K562AQR
chr12763028627630306+intron-Proximal4.831156.99120K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WDTC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WDTC1 is not available on ENCORE database.

  • 87 RBPs can affect the levels of WDTC1.  








The Knockdown/knockout RNA-Seq assay for WDTC1 is not available on ENCORE database.





87 RBPs can affect the gene expression of WDTC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WDTC1ENSG00000142784.11865.099701120.24990-0.372902.453701.47100HepG2AKAP8
WDTC1ENSG00000142784.11429.30080739.43320-0.784407.292106.11240HepG2AKAP8L
WDTC1ENSG00000142784.11636.97550832.12700-0.385602.361401.63190HepG2ASCC1
WDTC1ENSG00000142784.11746.54000439.734200.763507.939506.98930HepG2BOP1
WDTC1ENSG00000142784.111017.76740770.019400.402305.768404.75370HepG2DAZAP1
WDTC1ENSG00000142784.11836.61540680.682100.297502.995602.12980HepG2DDX19B
WDTC1ENSG00000142784.111373.23980963.342000.511404.236903.47580HepG2DDX3X
WDTC1ENSG00000142784.111423.50030827.716300.782107.994206.99580HepG2DDX6
WDTC1ENSG00000142784.11576.46030759.75830-0.398303.384702.47430HepG2EIF4G1
WDTC1ENSG00000142784.111452.750701016.137200.515603.428602.57780HepG2FIP1L1
WDTC1ENSG00000142784.11436.76640822.86420-0.913809.607708.40600HepG2G3BP1
WDTC1ENSG00000142784.11380.66710594.30440-0.642705.093603.70560HepG2GNB2L1
WDTC1ENSG00000142784.11656.89720457.579200.521503.234502.54700HepG2GPKOW
WDTC1ENSG00000142784.11990.64550651.375400.604809.498908.26900HepG2HNRNPF
WDTC1ENSG00000142784.11831.96150701.398100.246202.297801.67540HepG2HNRNPL
WDTC1ENSG00000142784.11564.34140436.679200.369901.863801.33750HepG2HNRNPLL
WDTC1ENSG00000142784.11546.98910700.85000-0.357602.359001.48020HepG2HNRNPM
WDTC1ENSG00000142784.11924.03600641.421300.526605.684404.68460HepG2IGF2BP1
WDTC1ENSG00000142784.11391.48340836.37300-1.0952013.6951012.32110HepG2IGF2BP2
WDTC1ENSG00000142784.11582.84780701.50120-0.267302.149001.49420HepG2ILF2
WDTC1ENSG00000142784.11607.10920841.34270-0.470702.601901.63350HepG2KHSRP
WDTC1ENSG00000142784.11298.80080892.43220-1.5786023.3900021.70180HepG2MATR3
WDTC1ENSG00000142784.11469.38320736.00920-0.649003.316202.33900HepG2PABPC1
WDTC1ENSG00000142784.11453.33070773.21530-0.770309.381008.18440HepG2PUM2
WDTC1ENSG00000142784.11971.72200749.662100.374204.422603.67890HepG2PUS1
WDTC1ENSG00000142784.111125.57280928.210800.278002.309401.82450HepG2RBM22
WDTC1ENSG00000142784.11492.14090702.19550-0.512803.843802.66070HepG2RBM27
WDTC1ENSG00000142784.11775.86010918.30490-0.243201.836001.31940HepG2RECQL
WDTC1ENSG00000142784.11443.20940647.58720-0.547104.203103.22560HepG2RPS2
WDTC1ENSG00000142784.11563.50420808.84000-0.521403.041602.20430HepG2RPS3A
WDTC1ENSG00000142784.11497.86080661.07090-0.409102.769201.69530HepG2RPS5
WDTC1ENSG00000142784.11659.80320942.29390-0.514103.159302.43830HepG2SF3A3
WDTC1ENSG00000142784.11619.01260432.207300.518102.449701.78340HepG2SF3B1
WDTC1ENSG00000142784.11780.62810922.33320-0.240701.797401.30350HepG2SF3B4
WDTC1ENSG00000142784.11571.75940713.18830-0.318902.899102.24240HepG2SMN1
WDTC1ENSG00000142784.11858.88190558.214800.621504.277603.06860HepG2SMNDC1
WDTC1ENSG00000142784.11612.35650289.162801.082403.595002.05760HepG2SNRNP200
WDTC1ENSG00000142784.11633.82530962.73240-0.603008.627707.89850HepG2SRSF1
WDTC1ENSG00000142784.11944.96560639.946200.562208.124307.03620HepG2SRSF7
WDTC1ENSG00000142784.11721.64560910.18930-0.334903.433102.87580HepG2SSB
WDTC1ENSG00000142784.11944.67440685.816200.461903.156702.15900HepG2SUPT6H
WDTC1ENSG00000142784.11523.99760865.38660-0.7238010.202909.23410HepG2TAF15
WDTC1ENSG00000142784.11673.96500425.713600.662705.710304.72430HepG2TARDBP
WDTC1ENSG00000142784.11485.78620667.24810-0.457902.678402.18470HepG2TIAL1
WDTC1ENSG00000142784.11534.57970673.28720-0.332802.827402.25850HepG2TRIM56
WDTC1ENSG00000142784.11529.80770806.80600-0.606807.762406.84030HepG2UTP3
WDTC1ENSG00000142784.11434.72100716.21270-0.7203010.932509.74660HepG2ZC3H8
WDTC1ENSG00000142784.11715.13120919.07710-0.362004.365303.71990HepG2ZNF622
WDTC1ENSG00000142784.111045.703801398.42000-0.419303.743302.34940K562AARS
WDTC1ENSG00000142784.113565.080403019.833400.239403.450402.82930K562AGGF1
WDTC1ENSG00000142784.112625.119903142.26750-0.259402.091601.52110K562AKAP8L
WDTC1ENSG00000142784.111779.802802236.58510-0.329602.784302.19440K562AQR
WDTC1ENSG00000142784.111774.930301167.072800.604806.748005.36820K562BOP1
WDTC1ENSG00000142784.112762.926001936.718500.512502.791501.72320K562CNOT7
WDTC1ENSG00000142784.111807.827901240.849800.542807.461906.16870K562CPSF6
WDTC1ENSG00000142784.112560.443702148.582300.252902.882501.64430K562DDX21
WDTC1ENSG00000142784.111906.492301475.941300.369203.902102.63380K562DDX3X
WDTC1ENSG00000142784.111874.588302534.65810-0.435208.453107.39530K562DDX47
WDTC1ENSG00000142784.112815.242903381.34260-0.264303.261602.30050K562DKC1
WDTC1ENSG00000142784.111804.344701388.644500.377704.759103.17340K562EIF4B
WDTC1ENSG00000142784.111763.442501345.999800.389604.821803.03410K562EWSR1
WDTC1ENSG00000142784.112373.916601442.219700.7189011.144109.32140K562FIP1L1
WDTC1ENSG00000142784.111710.466801262.696900.437804.083003.04040K562FMR1
WDTC1ENSG00000142784.111046.398001603.60590-0.6159011.4425010.29820K562FXR1
WDTC1ENSG00000142784.11322.17440786.91050-1.2884014.2561012.37420K562G3BP2
WDTC1ENSG00000142784.112259.125001901.788200.248302.414901.35740K562GLRX3
WDTC1ENSG00000142784.111697.154501184.639300.518605.946704.78460K562GPKOW
WDTC1ENSG00000142784.112657.011501530.219800.7960015.9940014.63750K562HNRNPC
WDTC1ENSG00000142784.111915.489901366.458500.487205.888004.14080K562HNRNPF
WDTC1ENSG00000142784.11906.521301244.66970-0.457403.413802.02310K562HNRNPK
WDTC1ENSG00000142784.111812.495901268.173000.515103.546802.15740K562IGF2BP3
WDTC1ENSG00000142784.111904.836901481.732300.362303.406601.82440K562LARP7
WDTC1ENSG00000142784.112022.791401551.928000.382203.062601.51470K562LIN28B
WDTC1ENSG00000142784.111659.776301156.368400.521306.163504.83120K562METAP2
WDTC1ENSG00000142784.112933.831402221.606400.4011011.294809.92850K562NSUN2
WDTC1ENSG00000142784.11917.243001165.38580-0.345402.625801.67360K562PCBP2
WDTC1ENSG00000142784.11606.495901252.75180-1.046505.047204.03520K562PRPF8
WDTC1ENSG00000142784.111581.068201272.734700.312902.838902.16700K562PTBP1
WDTC1ENSG00000142784.112039.664303150.48340-0.627209.375607.85130K562PUF60
WDTC1ENSG00000142784.112620.881803351.18000-0.354604.696003.27200K562PUM1
WDTC1ENSG00000142784.114726.100803116.310400.600702.526202.00200K562PUS1
WDTC1ENSG00000142784.111025.24580745.849800.458904.282202.57320K562RBM25
WDTC1ENSG00000142784.111551.171801189.576400.382802.959301.50970K562RBM34
WDTC1ENSG00000142784.111627.498501251.727000.378604.072702.86630K562RCC2
WDTC1ENSG00000142784.111691.909301186.607800.511705.657404.04130K562SRFBP1
WDTC1ENSG00000142784.111515.694601247.784100.280502.241901.59720K562SRSF1
WDTC1ENSG00000142784.111647.159001178.635700.482804.366702.99900K562SRSF5
WDTC1ENSG00000142784.112363.765601917.450000.301803.779502.39990K562SRSF7
WDTC1ENSG00000142784.111494.619502084.60580-0.480006.719705.42990K562SYNCRIP
WDTC1ENSG00000142784.111834.479501218.030100.590706.830605.45430K562TIA1
WDTC1ENSG00000142784.111954.429201319.633700.566505.823304.41310K562TIAL1
WDTC1ENSG00000142784.111721.096201195.656900.525405.856504.12770K562TRA2A
WDTC1ENSG00000142784.112222.707401401.895600.664805.810904.32430K562TRIM56
WDTC1ENSG00000142784.113363.869902739.526600.296104.670103.01620K562TROVE2
WDTC1ENSG00000142784.11436.22030787.37300-0.852007.870906.50410K562U2AF2
WDTC1ENSG00000142784.113002.616802355.616200.350006.462905.41830K562UPF1
WDTC1ENSG00000142784.112532.051502015.626700.329003.362702.40180K562WDR3
WDTC1ENSG00000142784.111815.599402096.01560-0.207202.535701.72270K562WDR43
WDTC1ENSG00000142784.113013.325002519.336200.258202.139501.39130K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WDTC1 is not available on ENCORE database.





6 RBPs can affect the splicing of WDTC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWDTC1ENSG00000142784.11chr1+276301112763028627627716276279522763149127631684-0.210000.000300.00778excludedK562SRSF1
SEWDTC1ENSG00000142784.11chr1+275990282759912527589642275897262760872927608776-0.059000.008090.07736excludedHepG2U2AF2
SEWDTC1ENSG00000142784.11chr1+276301112763028627627716276279522763149127631684-0.228000.000000.00009excludedK562HNRNPU
A3SSWDTC1ENSG00000142784.11chr1+276301112763168427631491276316842762771627627952-0.442000.000000.00068shorterK562HNRNPU
RIWDTC1ENSG00000142784.11chr1+2763011127631684276301112763028627631491276316840.101000.004370.07324includedK562RBM22
RIWDTC1ENSG00000142784.11chr1+2763011127631684276301112763028627631491276316840.124000.000650.01471includedHepG2G3BP1
RIWDTC1ENSG00000142784.11chr1+2763011127631684276301112763028627631491276316840.131000.001470.01694includedHepG2RBM22
RIWDTC1ENSG00000142784.11chr1+2763011127631684276301112763028627631491276316840.074000.006630.06151includedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WDTC1 is not avaliable on ENCORE database.