WDFY3

General Information

Gene Name       : WDFY3
Gene ID             : ENSG00000163625.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: WDFY3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WDFY3ENSG00000163625.151.140.060.60ENCSR000AEF
HepG2WDFY3ENSG00000163625.1510.9615.4813.22ENCSR985KAT
K562WDFY3ENSG00000163625.157.338.758.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WDFY3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WDFY3 RNA is bound by 22 proteins.  







eCLIP assay for WDFY3 is not avaliable on ENCORE database.





22 proteins are bound to WDFY3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr48559198285592067-3'-UTR,intron-Distal4.306385.76537HepG2PCBP2
chr48559095285591181-3'-UTR,intron-Distal5.6285710.27790HepG2FUBP3
chr48578169685781773-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.6128712.18505HepG2BCLAF1
chr48559162285591732-3'-UTR,intron-Distal4.524529.78867HepG2QKI
chr48559135485591528-3'-UTR,intron-Distal3.048223.24227HepG2HNRNPL
chr48588728485887394-5'-UTR,intron-Distal3.241928.40081HepG2EFTUD2
chr48573866685738724-CDS,intron-Distal3.113906.80151HepG2BCLAF1
chr48567826685678312-CDS,intron-Distal3.675416.06436HepG2BCLAF1
chr48567643085676436-CDS,intron-Distal4.187843.71570HepG2BCLAF1
chr48571092585710978-CDS,intron-Distal5.5931110.24913HepG2BCLAF1
chr48572453585724618-CDS,intron-Distal3.3904811.59302HepG2BCLAF1
chr48560505185605158-CDS,intron-Distal,intron-Proximal4.5452910.26986HepG2PRPF8
chr48573134885731437-CDS,intron-Distal,intron-Proximal3.789773.88253HepG2HLTF
chr48571087785710918-CDS,intron-Distal,intron-Proximal4.651578.85766HepG2BCLAF1
chr48573135385731444-CDS,intron-Distal,intron-Proximal3.853123.70701HepG2PRPF4
chr48566492785664952-CDS,intron-Distal4.673845.03746HepG2BCLAF1
chr48567501685675031-CDS,intron-Distal,intron-Proximal3.826265.35703HepG2BCLAF1
chr48566304785663074-CDS,intron-Distal3.033783.96465HepG2BCLAF1
chr48575821285758245-CDS,intron-Distal,intron-Proximal3.136053.08145HepG2HLTF
chr48575270285752738-CDS,intron-Distal3.520695.15500HepG2BCLAF1
chr48570713385707159-CDS,intron-Distal3.537596.06436HepG2BCLAF1
chr48565454085654561-CDS,intron-Distal3.842124.93978HepG2BCLAF1
chr48570715985707216-CDS,intron-Distal3.723049.50935HepG2BCLAF1
chr48568742985687473-CDS,intron-Distal5.326268.86847HepG2BCLAF1
chr48572446285724505-CDS,intron-Distal4.8262610.13662HepG2BCLAF1
chr48565461585654691-CDS,intron-Distal,intron-Proximal3.550898.99805HepG2BCLAF1
chr48575811485758168-CDS,intron-Distal3.820396.39464HepG2BCLAF1
chr48570128485701423-CDS,intron-Distal4.5012916.44038HepG2BCLAF1
chr48573135685731441-CDS,intron-Distal,intron-Proximal3.8152017.06349HepG2BCLAF1
chr48572289185723012-CDS,intron-Distal,intron-Proximal3.4646814.17692HepG2BCLAF1
chr48578160585781680-CDS,intron-Distal,intron-Proximal3.876013.82000HepG2GRWD1
chr48576230685762328-CDS,intron-Distal,intron-Proximal4.237867.65975HepG2BCLAF1
chr48574811185748132-CDS,intron-Distal3.054104.61799HepG2BCLAF1
chr48570881185708866-CDS,intron-Distal3.783729.41803HepG2BCLAF1
chr48575810685758168-CDS,intron-Distal4.012275.50789HepG2EIF3H
chr48562346585623512-CDS,intron-Distal,intron-Proximal4.864994.35676HepG2PRPF8
chr48570880885708868-CDS,intron-Distal,intron-Proximal3.963736.82094HepG2HLTF
chr48570135685701438-CDS,intron-Distal5.613099.35996HepG2EIF3H
chr48564256185642640-CDS,intron-Distal,intron-Proximal5.104866.28417HepG2FXR2
chr48570132985701431-CDS,intron-Distal3.922786.87526HepG2EIF3D
chr48571774585717814-CDS,intron-Distal4.3376211.11870HepG2BCLAF1
chr48563811185638198-CDS,intron-Distal,intron-Proximal3.642616.58004HepG2U2AF2
chr48570878785708862-CDS,intron-Distal5.728759.80193HepG2EIF3H
chr48565460285654766-CDS,intron-Distal,intron-Proximal3.887423.99145HepG2SRSF1
chr48563813585638145-CDS,intron-Distal4.461593.89826HepG2BCLAF1
chr48571773385717838-CDS,intron-Distal3.909056.66963HepG2EIF3H
chr48575821285758244-CDS,intron-Distal,intron-Proximal4.250407.65975HepG2BCLAF1
chr48571916285719244-CDS,intron-Distal3.408996.91872HepG2BCLAF1
chr48573103685731067-CDS,intron-Distal,intron-Proximal3.300625.79905HepG2BCLAF1
chr48571915085719212-CDS,intron-Distal4.984704.77840HepG2EIF3H
chr48576230585762351-CDS,intron-Distal,intron-Proximal4.504535.31233HepG2HLTF
chr48565461685654719-CDS,intron-Distal,intron-Proximal5.019906.28417HepG2FXR2
chr48569627585696287-CDS,intron-Distal3.846594.46864HepG2BCLAF1
chr48568700085687055-CDS,intron-Distal4.9710213.15686HepG2BCLAF1
chr48568706985687168-CDS,intron-Distal3.9427815.54811HepG2BCLAF1
chr48559843985598513-CDS,intron-Distal5.4959512.20879HepG2LIN28B
chr48571606985716133-CDS,intron-Distal,intron-Proximal5.006245.42455HepG2EIF3H
chr48571608485716126-CDS,intron-Distal4.8981311.54096HepG2BCLAF1
chr48573136485731438-CDS,intron-Distal5.097245.85678HepG2EIF3H
chr48570126785701432-CDS,intron-Distal4.466166.72556HepG2PPIG
chr48571097885711026-CDS,intron-Distal4.000997.23562HepG2BCLAF1
chr48573858285738629-CDS,intron-Distal3.876636.81385HepG2BCLAF1
chr48575811585758167-CDS,intron-Distal3.089503.07152HepG2HLTF
chr48572949285729618-CDS,intron-Distal,intron-Proximal3.133045.81599HepG2QKI
chr48565459285654782-CDS,intron-Distal,intron-Proximal3.253585.77687HepG2PPIG
chr48574223985742283-CDS,intron-Distal4.264126.22576HepG2BCLAF1
chr48563044585630494-CDS,intron-Distal,intron-Proximal3.575514.22917HepG2PPIG
chr48587919885879283-intron-Distal4.737485.89032HepG2QKI
chr48584240185842529-intron-Distal4.546807.56720K562PTBP1
chr48587975485879852-intron-Distal4.048349.81715HepG2XPO5
chr48584240185842445-intron-Distal4.9810614.62444HepG2PTBP1
chr48572961885729659-intron-Distal,intron-Proximal4.402564.55788HepG2QKI
chr48584246885842536-intron-Distal5.1008016.67986HepG2PTBP1
chr48580152485801606-intron-Distal5.638836.23638HepG2QKI
chr48564765885647726-intron-Distal3.471623.84494HepG2QKI
chr48582887985828943-intron-Distal4.496797.43919HepG2XPO5
chr48560432685604459-intron-Distal4.742325.84190HepG2HNRNPL
chr48584329385843351-intron-Distal4.073233.88068HepG2CSTF2
chr48578018185780257-intron-Distal3.619724.78196HepG2PTBP1
chr48588704185887129-intron-Distal3.521124.41726HepG2NKRF
chr48572959985729649-intron-Distal,intron-Proximal5.059604.99795K562QKI
chr48583723785837402-intron-Distal3.215033.76473K562KHSRP
chr48565538085655460-intron-Distal4.915307.49883HepG2KHSRP
chr48577995985780113-intron-Distal5.5960712.88196HepG2PTBP1
chr48584240385842530-intron-Distal3.895374.57751HepG2U2AF2
chr48584244585842468-intron-Distal4.6599517.32936HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WDFY3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WDFY3 is not available on ENCORE database.

  • 80 RBPs can affect the levels of WDFY3.  








The Knockdown/knockout RNA-Seq assay for WDFY3 is not available on ENCORE database.





80 RBPs can affect the gene expression of WDFY3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WDFY3ENSG00000163625.112147.436701606.509000.418603.587902.52050HepG2ABCF1
WDFY3ENSG00000163625.111797.112801407.702900.352205.596804.79200HepG2ACO1
WDFY3ENSG00000163625.111916.388001414.325400.438207.558906.36470HepG2AKAP8L
WDFY3ENSG00000163625.112581.215701821.672700.5027010.487509.29370HepG2AUH
WDFY3ENSG00000163625.11652.871101096.56780-0.748106.510305.04130HepG2BCCIP
WDFY3ENSG00000163625.111614.770901247.579000.372103.313102.57530HepG2DDX21
WDFY3ENSG00000163625.111603.188401221.089000.392704.085402.96450HepG2DDX24
WDFY3ENSG00000163625.112227.901001382.732600.688104.093002.91570HepG2DDX59
WDFY3ENSG00000163625.111618.186801346.792900.264802.890202.19800HepG2DKC1
WDFY3ENSG00000163625.11847.944401152.96040-0.443307.229906.24540HepG2DNAJC2
WDFY3ENSG00000163625.111839.643501316.571200.482504.889003.82450HepG2EIF4G2
WDFY3ENSG00000163625.113226.897802091.542800.6255017.5249016.22510HepG2ETF1
WDFY3ENSG00000163625.112044.114301622.260000.333402.240801.54420HepG2FIP1L1
WDFY3ENSG00000163625.111880.515001219.728700.624502.405901.46560HepG2FTO
WDFY3ENSG00000163625.111305.642601680.77950-0.364402.671301.99160HepG2FXR1
WDFY3ENSG00000163625.111983.503201559.303500.347002.378201.75820HepG2G3BP1
WDFY3ENSG00000163625.111597.184401311.791800.283902.811002.08780HepG2HNRNPF
WDFY3ENSG00000163625.111009.893001269.02710-0.329504.454503.61480HepG2HNRNPL
WDFY3ENSG00000163625.111564.041601291.723800.275902.022101.39670HepG2IGF2BP1
WDFY3ENSG00000163625.111007.033501325.56520-0.396506.802805.70430HepG2ILF2
WDFY3ENSG00000163625.112073.514101594.195900.379102.255401.36250HepG2KHSRP
WDFY3ENSG00000163625.111224.938901690.81700-0.465003.472402.77240HepG2MATR3
WDFY3ENSG00000163625.111734.200001313.266000.401004.426203.41840HepG2MSI2
WDFY3ENSG00000163625.112143.249201730.678900.308401.975801.43580HepG2NCBP2
WDFY3ENSG00000163625.111153.148501381.41030-0.260602.248101.56080HepG2NOL12
WDFY3ENSG00000163625.11763.335001151.36220-0.593003.111202.16730HepG2PABPC1
WDFY3ENSG00000163625.111015.376201284.53630-0.339203.992802.99590HepG2PARN
WDFY3ENSG00000163625.111296.920501527.97500-0.236502.468001.88720HepG2PCBP1
WDFY3ENSG00000163625.11926.100701157.45200-0.321703.173702.38980HepG2PPIL4
WDFY3ENSG00000163625.111672.325701164.472800.522109.460208.15460HepG2PRPF4
WDFY3ENSG00000163625.111749.008901399.823700.321203.174202.54930HepG2PUM1
WDFY3ENSG00000163625.112565.070401683.856600.6071011.7098010.55750HepG2QKI
WDFY3ENSG00000163625.112267.900401748.138900.375404.329703.71970HepG2RBM22
WDFY3ENSG00000163625.112115.972101528.207700.469405.837904.89040HepG2RBM25
WDFY3ENSG00000163625.111114.711301443.77080-0.373202.501101.56240HepG2RBM27
WDFY3ENSG00000163625.112218.358401413.369700.650307.273606.24410HepG2RPLP0
WDFY3ENSG00000163625.111966.619901431.114300.458502.537501.62960HepG2RPS10
WDFY3ENSG00000163625.11890.521201155.67720-0.376004.983404.16240HepG2SAFB2
WDFY3ENSG00000163625.111720.185701303.838600.399703.596102.80040HepG2SF3B1
WDFY3ENSG00000163625.111718.791101264.390300.442907.460906.39430HepG2SLBP
WDFY3ENSG00000163625.111104.574901347.74070-0.287103.798203.06440HepG2SMN1
WDFY3ENSG00000163625.111960.136701450.746000.434102.332001.61750HepG2SNRNP70
WDFY3ENSG00000163625.112772.656001974.451600.4897011.9554011.10830HepG2SRFBP1
WDFY3ENSG00000163625.112025.972701689.591200.261803.269602.76620HepG2SRSF1
WDFY3ENSG00000163625.111576.976301288.849500.291002.255601.62060HepG2SRSF7
WDFY3ENSG00000163625.111998.603101374.572100.5399012.2181011.20440HepG2SRSF9
WDFY3ENSG00000163625.112681.495601714.279300.6453018.8690017.78610HepG2SSB
WDFY3ENSG00000163625.112112.411701518.669400.476007.658206.80210HepG2TAF15
WDFY3ENSG00000163625.11802.832201272.22680-0.6642013.5629012.45020HepG2TRIM56
WDFY3ENSG00000163625.111666.359901288.278400.371203.686702.66310HepG2TUFM
WDFY3ENSG00000163625.112110.044101387.917300.604307.626706.58710HepG2U2AF1
WDFY3ENSG00000163625.111797.443901363.616700.398402.710701.88180HepG2UBE2L3
WDFY3ENSG00000163625.11394.16890634.04430-0.685805.614304.52490HepG2UCHL5
WDFY3ENSG00000163625.11704.51730982.87160-0.480402.273001.37020HepG2UPF2
WDFY3ENSG00000163625.11683.746201056.54010-0.627805.438004.43250HepG2XRN2
WDFY3ENSG00000163625.111711.403301149.170800.5745013.6126012.31070HepG2ZC3H8
WDFY3ENSG00000163625.11386.74460520.45100-0.428402.420701.51130K562AKAP8
WDFY3ENSG00000163625.11313.99260492.89230-0.650504.137303.33550K562AKAP8L
WDFY3ENSG00000163625.11776.60540420.404100.885309.687808.69410K562AQR
WDFY3ENSG00000163625.11337.32040517.12570-0.616403.732302.65830K562ATP5C1
WDFY3ENSG00000163625.11432.27710320.675200.430702.438901.69890K562CPSF6
WDFY3ENSG00000163625.11877.45940703.061900.319602.197401.32990K562CELF1
WDFY3ENSG00000163625.11372.60000530.51010-0.509802.964802.05340K562DKC1
WDFY3ENSG00000163625.11499.90950348.884500.518804.256103.39300K562EIF2S2
WDFY3ENSG00000163625.11398.18930291.210100.451302.660901.85660K562EIF4A3
WDFY3ENSG00000163625.11256.01810376.70750-0.557203.361302.41950K562FIP1L1
WDFY3ENSG00000163625.11438.48630326.332000.426102.242301.46940K562FMR1
WDFY3ENSG00000163625.11452.24210221.230201.0314010.081608.99780K562HNRNPC
WDFY3ENSG00000163625.11397.68920523.15050-0.395602.174801.45440K562KIF1C
WDFY3ENSG00000163625.11407.99500261.465900.641803.283502.25740K562KRR1
WDFY3ENSG00000163625.11338.52650500.72810-0.564803.468802.22030K562MAK16
WDFY3ENSG00000163625.11439.41860586.05110-0.415402.367701.53590K562MBNL1
WDFY3ENSG00000163625.11430.00300333.780100.365302.289401.55200K562MTPAP
WDFY3ENSG00000163625.11523.57690312.665400.743706.512504.99570K562PCBP2
WDFY3ENSG00000163625.11663.14210424.215100.644404.780203.68920K562PCBP3
WDFY3ENSG00000163625.11531.09210325.395600.706706.908005.64990K562POLR2G
WDFY3ENSG00000163625.11240.75510427.63750-0.828806.830505.44160K562PPIG
WDFY3ENSG00000163625.11271.60160488.95390-0.848205.489504.75640K562PUS1
WDFY3ENSG00000163625.11295.57430476.29590-0.688303.997503.30060K562RBM15
WDFY3ENSG00000163625.11505.47400365.962500.465803.603902.68110K562SF3A3
WDFY3ENSG00000163625.11484.83210291.233200.735204.937603.61140K562SF3B1
WDFY3ENSG00000163625.11515.48870374.941500.459203.983102.88150K562SRPK2
WDFY3ENSG00000163625.11478.12510334.689900.514503.673502.86470K562SRSF1
WDFY3ENSG00000163625.11425.18240309.374300.458603.015902.17720K562U2AF2
WDFY3ENSG00000163625.11670.22580498.199000.427803.176301.78170K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WDFY3 is not available on ENCORE database.





7 RBPs can affect the splicing of WDFY3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEWDFY3ENSG00000163625.11chr4-8564801385648064856455788564574785654534856547620.348000.000320.03380includedHepG2G3BP1
SEWDFY3ENSG00000163625.11chr4-857294868572957085724442857246208573103985731497-0.067000.000190.00496excludedHepG2U2AF1
SEWDFY3ENSG00000163625.11chr4-8564801385648064856455788564574785654534856547620.512000.000000.00000includedHepG2HNRNPK
SEWDFY3ENSG00000163625.11chr4-8572948685729570857244428572462085731039857314970.569000.000000.00012includedHepG2QKI
SEWDFY3ENSG00000163625.11chr4-857656088576566285762344857624168577105485771168-0.087000.000150.00274excludedHepG2U2AF2
SEWDFY3ENSG00000163625.11chr4-8572948685729570857244428572462085731039857314970.316000.000550.03678includedHepG2NCBP2
SEWDFY3ENSG00000163625.11chr4-857656088576566285762344857624168577105485771168-0.102000.000170.03100excludedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for WDFY3 is not avaliable on ENCORE database.