TSPAN4

General Information

Gene Name       : TSPAN4
Gene ID             : ENSG00000214063.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TSPAN4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TSPAN4ENSG00000214063.100.140.650.40ENCSR000AEF
HepG2TSPAN4ENSG00000214063.1067.128.5237.82ENCSR985KAT
K562TSPAN4ENSG00000214063.1014.313.799.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TSPAN4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TSPAN4 RNA is bound by 38 proteins.  







eCLIP assay for TSPAN4 is not avaliable on ENCORE database.





38 proteins are bound to TSPAN4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11866897866969+3'-UTR4.8927613.31534HepG2AKAP1
chr11866898866962+3'-UTR4.1975016.26707HepG2LARP4
chr11866713866769+3'-UTR4.3154918.17211HepG2UPF1
chr11866970867052+3'-UTR6.1899616.02117HepG2UPF1
chr11866962867044+3'-UTR4.1110010.83240HepG2LARP4
chr11866799866864+3'-UTR6.0667416.02117HepG2UPF1
chr11866898866958+3'-UTR3.169783.47089HepG2TIAL1
chr11867001867043+3'-UTR4.546713.86209HepG2DDX55
chr11866990867079+3'-UTR4.5759710.90209HepG2AKAP1
chr11866975867061+3'-UTR4.979487.21253K562UPF1
chr11866898866960+3'-UTR3.308485.09919K562DDX55
chr11866900866970+3'-UTR6.5106418.72324HepG2UPF1
chr11866898866975+3'-UTR4.3357511.45456HepG2DDX55
chr11866900866955+3'-UTR3.975403.49438K562DDX6
chr11866770866830+3'-UTR3.447044.88668HepG2AKAP1
chr11866769866799+3'-UTR4.9346311.89503HepG2UPF1
chr11866710866777+3'-UTR3.982256.89721HepG2LARP4
chr11866658866702+3'-UTR3.539697.57190HepG2UPF1
chr11862547862612+3'-UTR,CDS,intron-Distal,intron-Proximal4.029277.77439HepG2DDX3X
chr11866901866958+3'-UTR4.163806.92152K562PABPC4
chr11866719866770+3'-UTR4.005774.77155HepG2AKAP1
chr11866637866789+3'-UTR4.191848.49652HepG2PABPN1
chr11844487844538+5'-UTR,intron-Distal3.9370811.03333HepG2CSTF2T
chr11849972850031+5'-UTR,intron-Distal4.057613.48466HepG2SLTM
chr11847264847302+5'-UTR,intron-Distal,intron-Proximal4.569659.66125HepG2DDX3X
chr11844430844478+5'-UTR,intron-Distal4.6316114.41467HepG2CSTF2T
chr11843311843375+5'-UTR,intron-Distal5.4190521.98744HepG2NKRF
chr11843597843622+5'-UTR,intron-Distal3.297607.23670HepG2CSTF2T
chr11843433843509+5'-UTR,intron-Distal3.497423.48567K562SLTM
chr11843329843345+5'-UTR,intron-Distal4.130624.69571HepG2FKBP4
chr11843725843826+5'-UTR,intron-Distal,intron-Proximal4.0672813.17945HepG2FAM120A
chr11843711843794+5'-UTR,intron-Distal,intron-Proximal5.041977.22498K562EWSR1
chr11849820849868+5'-UTR,intron-Distal5.9857017.90452HepG2CSTF2T
chr11842902843023+5'-UTR,intron-Distal,intron-Proximal4.2969612.55615HepG2DDX3X
chr11843318843368+5'-UTR,intron-Distal6.2261912.91317HepG2FAM120A
chr11843323843364+5'-UTR,intron-Distal3.9347712.81051HepG2XRN2
chr11843425843473+5'-UTR,intron-Distal4.5777311.49466HepG2CSTF2T
chr11843421843532+5'-UTR,intron-Distal5.1843724.60082HepG2NKRF
chr11843486843528+5'-UTR,intron-Distal4.3751011.49466HepG2CSTF2T
chr11842925843010+5'-UTR,intron-Proximal4.414149.71175HepG2FKBP4
chr11847198847264+5'-UTR,intron-Distal,intron-Proximal4.1315519.82953HepG2DDX3X
chr11842938843016+5'-UTR,intron-Distal,intron-Proximal3.862393.37414K562CSTF2T
chr11843528843626+5'-UTR,intron-Distal3.784903.61584HepG2SRSF1
chr11849837849886+5'-UTR,intron-Distal4.230543.18269HepG2XPO5
chr11843427843484+5'-UTR,intron-Distal3.633746.04314HepG2FKBP4
chr11842927843021+5'-UTR,intron-Distal,intron-Proximal3.648106.65702HepG2NCBP2
chr11842930843009+5'-UTR,intron-Proximal4.2088716.14440HepG2CSTF2T
chr11847131847189+5'-UTR,intron-Distal,intron-Proximal4.700713.91589K562SF3B4
chr11849957850029+5'-UTR,intron-Distal5.5821336.05159HepG2CSTF2T
chr11849811849855+5'-UTR,intron-Distal3.636134.76224HepG2NKRF
chr11842929842968+5'-UTR,intron-Proximal4.086757.48343HepG2NKRF
chr11842943843025+5'-UTR,intron-Distal,intron-Proximal4.281613.30664K562NONO
chr11849955850022+5'-UTR,intron-Distal3.221603.00054HepG2PRPF4
chr11843324843350+5'-UTR,intron-Distal3.859703.03048HepG2GTF2F1
chr11843722843826+5'-UTR,intron-Distal,intron-Proximal4.065706.10298HepG2GTF2F1
chr11848820848866+5'-UTR,intron-Distal3.571688.85493HepG2CSTF2T
chr11849807849871+5'-UTR,intron-Distal4.696747.13447HepG2FAM120A
chr11843317843365+5'-UTR,intron-Distal4.4027616.50203HepG2CSTF2T
chr11850166850219+5'-UTR,intron-Distal,intron-Proximal5.1232816.60000HepG2CSTF2T
chr11849817849883+5'-UTR,intron-Distal3.285133.68924HepG2PRPF4
chr11849956850018+5'-UTR,intron-Distal5.667159.23199HepG2FKBP4
chr11843437843524+5'-UTR,intron-Distal3.551299.48128HepG2FAM120A
chr11844491844527+5'-UTR,intron-Distal3.268974.20198HepG2FAM120A
chr11849929850034+5'-UTR,intron-Distal3.900367.50411HepG2FAM120A
chr11850287850336+5'-UTR,CDS,intron-Distal,intron-Proximal3.716467.12467HepG2DDX3X
chr11843452843505+5'-UTR,intron-Distal4.171833.15816HepG2PRPF4
chr11843307843361+5'-UTR,intron-Distal4.550494.75718K562EWSR1
chr11843438843501+5'-UTR,intron-Distal4.158353.43867K562CSTF2T
chr11847155847192+5'-UTR,intron-Distal,intron-Proximal6.2509311.53766HepG2SF3A3
chr11865555865616+CDS,intron-Distal,intron-Proximal3.194906.06432HepG2SND1
chr11862722862787+CDS,intron-Distal,intron-Proximal4.057326.74268HepG2PRPF8
chr11865734865826+CDS,intron-Proximal5.573037.10260HepG2RPS3
chr11865732865771+CDS3.112794.24433HepG2SND1
chr11865925866000+CDS4.290837.79455HepG2PPIG
chr11865631865744+CDS,intron-Proximal3.296203.39477K562BUD13
chr11865512865555+CDS,intron-Distal,intron-Proximal3.183353.67910HepG2SND1
chr11865512865603+CDS,intron-Distal,intron-Proximal3.122533.00343HepG2GRWD1
chr11865917865967+CDS,intron-Proximal3.283665.96464HepG2SND1
chr11865606865734+CDS,intron-Proximal3.6030211.13244HepG2PRPF8
chr11865771865825+CDS5.0064411.90389HepG2SND1
chr11846890846976+intron-Distal4.155844.33692K562NONO
chr11850815850836+intron-Distal5.4975610.34825HepG2CSTF2T
chr11858035858077+intron-Distal3.857399.33519HepG2CSTF2T
chr11845575845693+intron-Distal5.154396.58779K562EWSR1
chr11853439853476+intron-Distal5.7241010.58957HepG2CSTF2T
chr11846873846897+intron-Distal3.115313.15535K562EWSR1
chr11853118853198+intron-Distal4.823458.56193HepG2FAM120A
chr11848482848508+intron-Distal5.3810010.82255HepG2CSTF2T
chr11845220845276+intron-Distal3.529875.63886HepG2FAM120A
chr11852836852875+intron-Distal3.338643.94332HepG2FAM120A
chr11860003860043+intron-Distal3.901093.07260HepG2AGGF1
chr11851505851565+intron-Distal6.5794828.40449HepG2CSTF2T
chr11850533850571+intron-Distal4.020133.30328HepG2SFPQ
chr11853880853932+intron-Distal4.435435.05096K562EWSR1
chr11845986846026+intron-Distal4.259779.68760HepG2NKRF
chr11853875853930+intron-Distal4.012167.26345HepG2NKRF
chr11845873845901+intron-Distal5.3308810.82858HepG2CSTF2T
chr11853632853701+intron-Distal4.6195223.78260HepG2CSTF2T
chr11843795843854+intron-Distal,intron-Proximal5.528409.08773HepG2NKRF
chr11859528859561+intron-Distal4.056263.07260HepG2AGGF1
chr11843759843872+intron-Distal,intron-Proximal3.975459.05659HepG2DROSHA
chr11854741854758+intron-Distal3.544594.14880HepG2CSTF2T
chr11843922844007+intron-Distal3.416724.68205HepG2DGCR8
chr11856613856650+intron-Distal3.234836.35020HepG2CSTF2T
chr11845939846017+intron-Distal3.074115.19925HepG2PRPF4
chr11845142845192+intron-Distal5.219896.62861HepG2FAM120A
chr11853607853632+intron-Distal4.5514912.55969HepG2CSTF2T
chr11847951848034+intron-Distal4.0708911.59139HepG2NKRF
chr11845957846031+intron-Distal3.9624812.64248HepG2FAM120A
chr11850545850614+intron-Distal3.8728015.52091HepG2CSTF2T
chr11864177864208+intron-Distal3.514084.37279HepG2CSTF2T
chr11853836853878+intron-Distal4.2249310.98902HepG2CSTF2T
chr11853619853701+intron-Distal4.155844.33692K562NONO
chr11859665859720+intron-Distal4.310867.83098K562AGGF1
chr11846086846131+intron-Distal3.431116.84294HepG2CSTF2T
chr11844196844306+intron-Distal,intron-Proximal4.5017817.86059HepG2NKRF
chr11860611860641+intron-Distal4.269393.25012HepG2FKBP4
chr11843729843820+intron-Distal,intron-Proximal4.389867.70912HepG2PRPF4
chr11844316844362+intron-Distal6.2392618.17975HepG2CSTF2T
chr11852835852882+intron-Distal3.9162711.66465HepG2CSTF2T
chr11851740851813+intron-Distal4.080294.27402K562CSTF2T
chr11845222845284+intron-Distal4.0667818.28523HepG2CSTF2T
chr11850854850917+intron-Distal4.2409512.85465HepG2CSTF2T
chr11853011853061+intron-Distal4.801205.69834HepG2NKRF
chr11844957844995+intron-Distal4.6829111.98634HepG2CSTF2T
chr11850426850470+intron-Distal,intron-Proximal4.265763.59099HepG2FASTKD2
chr11847965848039+intron-Distal4.363234.61288HepG2PRPF4
chr11846922846980+intron-Distal4.918986.70265K562EWSR1
chr11844005844053+intron-Distal4.4042714.77417HepG2CSTF2T
chr11848674848728+intron-Distal4.907707.06641HepG2PCBP2
chr11858230858271+intron-Distal4.534474.86316HepG2FAM120A
chr11846756846801+intron-Distal3.120786.15331HepG2NKRF
chr11848975848998+intron-Distal,intron-Proximal3.922673.30336K562EWSR1
chr11856359856443+intron-Distal4.0441511.17980HepG2CSTF2T
chr11855369855388+intron-Distal5.048858.08715HepG2CSTF2T
chr11853606853681+intron-Distal5.2941414.06584HepG2FAM120A
chr11854311854370+intron-Distal4.6087618.08780HepG2CSTF2T
chr11850493850508+intron-Distal3.465613.95205HepG2NKRF
chr11853636853707+intron-Distal4.672744.53069HepG2CDC40
chr11855253855320+intron-Distal5.249157.51888HepG2FAM120A
chr11845593845634+intron-Distal4.195696.00449HepG2FAM120A
chr11846150846214+intron-Distal4.8744020.56544HepG2CSTF2T
chr11859538859665+intron-Distal3.9974711.95782K562AGGF1
chr11851781851847+intron-Distal5.671209.90837HepG2FAM120A
chr11853123853185+intron-Distal4.089613.69238K562GTF2F1
chr11849494849548+intron-Distal4.631325.43503HepG2SFPQ
chr11853971854017+intron-Distal3.462054.22628K562EWSR1
chr11848201848253+intron-Distal3.162754.79030HepG2NKRF
chr11853632853679+intron-Distal4.351614.38204HepG2SFPQ
chr11844319844361+intron-Distal4.098326.56790HepG2FAM120A
chr11855018855072+intron-Distal5.035786.03756HepG2FAM120A
chr11853125853210+intron-Distal4.762417.66822HepG2PRPF4
chr11845947846028+intron-Distal5.2484812.46752HepG2FKBP4
chr11853620853687+intron-Distal3.652228.18708HepG2NKRF
chr11847967848033+intron-Distal6.3446223.01442HepG2CSTF2T
chr11848209848244+intron-Distal3.458369.67230HepG2CSTF2T
chr11846510846535+intron-Distal3.936466.00449HepG2FAM120A
chr11853598853689+intron-Distal4.478894.61288HepG2PRPF4
chr11850465850522+intron-Distal,intron-Proximal4.1116614.62490HepG2CSTF2T
chr11843816843857+intron-Distal,intron-Proximal3.837333.05559HepG2DGCR8
chr11851055851120+intron-Distal3.978194.69571HepG2FKBP4
chr11846132846157+intron-Distal3.469723.87101HepG2NKRF
chr11851504851574+intron-Distal5.716087.22168HepG2FAM120A
chr11853119853187+intron-Distal3.8247311.81310HepG2CSTF2T
chr11854308854375+intron-Distal3.363233.46130HepG2PRPF4
chr11851725851765+intron-Distal4.002444.16791HepG2NKRF
chr11843779843832+intron-Distal,intron-Proximal3.226963.73413HepG2RBFOX2
chr11858232858271+intron-Distal3.264806.12336HepG2CSTF2T
chr11853129853185+intron-Distal3.870277.57997HepG2NKRF
chr11860216860301+intron-Distal3.198904.56333HepG2AGGF1
chr11843170843239+intron-Distal4.5165511.74221HepG2CSTF2T
chr11854493854534+intron-Distal4.5509611.88189HepG2CSTF2T
chr11851363851386+intron-Distal4.278569.42344HepG2CSTF2T
chr11853965854023+intron-Distal4.8408619.07871HepG2CSTF2T
chr11844228844280+intron-Distal,intron-Proximal3.876898.33603HepG2FKBP4
chr11849511849556+intron-Distal3.985034.61345HepG2FAM120A
chr11853872853936+intron-Distal4.072308.79576HepG2FAM120A
chr11844202844308+intron-Distal,intron-Proximal3.878946.49835HepG2PRPF4
chr11855228855271+intron-Distal3.8212510.49552HepG2CSTF2T
chr11847746847843+intron-Distal4.038005.44336HepG2XRN2
chr11844958844998+intron-Distal5.5278911.70978HepG2FAM120A
chr11853838853872+intron-Distal4.586243.99130HepG2FAM120A
chr11845953846008+intron-Distal4.397663.75568K562SLTM
chr11853866853945+intron-Distal4.912266.30261HepG2SFPQ
chr11853435853472+intron-Distal3.243294.46248HepG2FAM120A
chr11845391845442+intron-Distal4.220397.41879HepG2FAM120A
chr11845752845802+intron-Distal4.036903.19625HepG2NCBP2
chr11844781844861+intron-Distal5.1396512.90130HepG2FAM120A
chr11864154864225+intron-Distal5.212088.60555HepG2RBFOX2
chr11845764845784+intron-Distal3.687413.28007HepG2NKRF
chr11858333858380+intron-Distal4.388777.72301HepG2CSTF2T
chr11851256851313+intron-Distal3.437244.20405K562EWSR1
chr11855960856005+intron-Distal4.704024.28089HepG2FAM120A
chr11851710851772+intron-Distal3.947213.39593HepG2PRPF4
chr11844208844297+intron-Distal,intron-Proximal4.7945713.85674HepG2FAM120A
chr11845945846036+intron-Distal4.485209.15743K562EWSR1
chr11853355853408+intron-Distal3.497877.30591HepG2CSTF2T
chr11844221844317+intron-Distal,intron-Proximal5.3587310.44148K562EWSR1
chr11847458847485+intron-Distal3.918983.28464K562EWSR1
chr11843919843984+intron-Distal4.119786.61810HepG2FKBP4
chr11851356851387+intron-Distal4.610214.57154HepG2FAM120A
chr11846517846551+intron-Distal3.958644.35052HepG2FKBP4
chr11846154846209+intron-Distal4.573255.27179K562EWSR1
chr11847979848040+intron-Distal4.722476.27023K562EWSR1
chr11852567852618+intron-Distal4.153723.58113K562EWSR1
chr11844719844760+intron-Distal5.423609.60876HepG2FAM120A
chr11846925846981+intron-Distal4.183343.70058K562CSTF2T
chr11844246844295+intron-Distal,intron-Proximal3.557767.12549HepG2XRN2
chr11843807843855+intron-Distal,intron-Proximal6.0283116.43147HepG2CSTF2T
chr11845377845446+intron-Distal6.6078124.07806HepG2CSTF2T
chr11851024851119+intron-Distal5.1428725.03772HepG2CSTF2T
chr11845080845097+intron-Distal5.142258.56618HepG2CSTF2T
chr11849478849548+intron-Distal6.4885823.55574HepG2CSTF2T
chr11844231844302+intron-Distal,intron-Proximal5.6700124.36373HepG2CSTF2T
chr11855935856023+intron-Distal4.2655913.08437HepG2CSTF2T
chr11845580845625+intron-Distal3.893416.79780HepG2NKRF
chr11844226844364+intron-Distal,intron-Proximal4.5469111.83471HepG2DROSHA
chr11844208844301+intron-Distal,intron-Proximal4.710123.19125K562GTF2F1
chr11846935846965+intron-Distal4.693384.31089HepG2FKBP4
chr11853980854021+intron-Distal3.219684.55362HepG2NKRF
chr11843995844051+intron-Distal3.181785.05401HepG2FAM120A
chr11864146864209+intron-Distal4.214704.35952HepG2PRPF4
chr11853610853665+intron-Distal4.958645.05945HepG2FKBP4
chr11845634845689+intron-Distal3.880165.25366HepG2FAM120A
chr11852835852953+intron-Distal4.1299511.85976HepG2NKRF
chr11845577845617+intron-Distal4.997235.93132HepG2FKBP4
chr11851232851303+intron-Distal4.648097.13447HepG2FAM120A
chr11853980854023+intron-Distal3.715933.14982HepG2FKBP4
chr11856969856973+intron-Distal4.734834.36133HepG2CSTF2T
chr11855271855324+intron-Distal5.8394411.61783HepG2CSTF2T
chr11846743846796+intron-Distal4.041304.10323HepG2PRPF4
chr11853318853331+intron-Distal4.505876.08348HepG2CSTF2T
chr11845950846023+intron-Distal5.4571938.44139HepG2CSTF2T
chr11845942845986+intron-Distal4.8896110.12186HepG2NKRF
chr11855626855691+intron-Distal4.4887315.09805HepG2CSTF2T
chr11853633853687+intron-Distal3.873514.46210HepG2FASTKD2
chr11853844853924+intron-Distal4.253704.86307HepG2PRPF4
chr11845628845684+intron-Distal5.3724718.08531HepG2CSTF2T
chr11854564854607+intron-Distal3.076495.46109HepG2CSTF2T
chr11844600844635+intron-Distal,intron-Proximal5.326327.35173HepG2CSTF2T
chr11853878853944+intron-Distal5.6151826.39627HepG2CSTF2T
chr11853038853082+intron-Distal5.027896.92491HepG2FAM120A
chr11852564852601+intron-Distal5.4553511.61783HepG2CSTF2T
chr11853614853698+intron-Distal4.105604.48935K562CSTF2T
chr11846843846893+intron-Distal3.919603.45219HepG2RBFOX2
chr11856655856707+intron-Distal5.154775.44892HepG2FAM120A
chr11854412854453+intron-Distal5.192929.99173HepG2CSTF2T
chr11846699846707+intron-Distal3.964555.56645HepG2CSTF2T
chr11846504846551+intron-Distal4.6178117.33360HepG2CSTF2T
chr11853627853683+intron-Distal4.578603.19125K562GTF2F1
chr11855241855299+intron-Distal3.955926.56195HepG2NKRF
chr11864166864215+intron-Distal3.509584.46513HepG2NKRF
chr11844814844869+intron-Distal4.342075.28165K562CSTF2T
chr11843746843821+intron-Distal,intron-Proximal4.388065.18111K562CSTF2T
chr11851723851781+intron-Distal4.9701512.31972HepG2FAM120A
chr11855008855062+intron-Distal3.6714711.94332HepG2CSTF2T
chr11845994846009+intron-Distal3.487833.12080HepG2XPO5
chr11853612853709+intron-Distal3.607766.92611K562EWSR1
chr11849081849113+intron-Distal4.5502610.62681HepG2CSTF2T
chr11846932846968+intron-Distal3.355338.07946HepG2CSTF2T
chr11859176859270+intron-Distal5.5170911.04892K562AGGF1
chr11856665856706+intron-Distal3.408798.85479HepG2CSTF2T
chr11843899843945+intron-Distal5.0876515.57904HepG2CSTF2T
chr11862339862371+intron-Distal,intron-Proximal4.528776.08348HepG2CSTF2T
chr11852566852617+intron-Distal3.240003.71727HepG2NKRF
chr11843737843782+intron-Distal,intron-Proximal4.4310612.46509HepG2CSTF2T
chr11844899844938+intron-Distal4.107968.83513HepG2CSTF2T
chr11845582845628+intron-Distal4.4941813.42347HepG2CSTF2T
chr11850499850509+intron-Distal4.742313.70291HepG2FAM120A
chr11851251851297+intron-Distal3.316004.55362HepG2NKRF
chr11852915852964+intron-Distal3.7892812.38761HepG2CSTF2T
chr11854076854138+intron-Distal5.0985418.85175HepG2CSTF2T
chr11852143852191+intron-Distal4.400244.98766K562EWSR1
chr11843945843994+intron-Distal5.2456815.84039HepG2CSTF2T
chr11847973848048+intron-Distal3.972387.69118HepG2FAM120A
chr11854313854379+intron-Distal4.218486.87013HepG2FAM120A
chr11845131845178+intron-Distal4.2787610.29749HepG2CSTF2T
chr11851230851308+intron-Distal5.6252722.33012HepG2CSTF2T
chr11844785844850+intron-Distal3.8713515.17741HepG2CSTF2T
chr11852921852992+intron-Distal4.608447.98928HepG2FAM120A
chr11854333854374+intron-Distal3.447523.87101HepG2NKRF
chr11853608853701+intron-Distal4.172903.14880HepG2DROSHA
chr11853040853068+intron-Distal4.161568.19675HepG2CSTF2T
chr11853973854019+intron-Distal4.873834.57154HepG2FAM120A
chr11845943846030+intron-Distal3.181605.12258K562CSTF2T
chr11845739845792+intron-Distal3.5339711.00283HepG2CSTF2T
chr11858061858196+intron-Distal3.042335.10735HepG2SFPQ
chr11851246851289+intron-Distal3.365714.56089HepG2FKBP4
chr11850447850461+intron-Distal,intron-Proximal4.222988.91945HepG2CSTF2T
chr11864370864415+intron-Proximal4.017803.18939HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TSPAN4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TSPAN4 is not available on ENCORE database.

  • 100 RBPs can affect the levels of TSPAN4.  








The Knockdown/knockout RNA-Seq assay for TSPAN4 is not available on ENCORE database.





100 RBPs can affect the gene expression of TSPAN4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TSPAN4ENSG00000214063.6163.60770370.67890-1.179903.525402.46610HepG2ABCF1
TSPAN4ENSG00000214063.6969.51050507.352000.934203.453502.86790HepG2AKAP1
TSPAN4ENSG00000214063.6324.16030522.86250-0.689703.453302.60760HepG2AKAP8L
TSPAN4ENSG00000214063.6459.58010185.332601.3101014.8504013.61710HepG2BOP1
TSPAN4ENSG00000214063.6330.94330520.27590-0.652703.356202.63600HepG2CKAP4
TSPAN4ENSG00000214063.6626.75450239.792201.3860011.9702010.41980HepG2CNOT7
TSPAN4ENSG00000214063.6270.32920170.142400.667903.249402.51010HepG2CPSF6
TSPAN4ENSG00000214063.6501.92400305.002000.718604.476103.09190HepG2CPSF7
TSPAN4ENSG00000214063.6213.71060127.282500.747504.091302.85000HepG2YBX3
TSPAN4ENSG00000214063.686.10940169.45900-0.976703.633002.41350HepG2CSTF2
TSPAN4ENSG00000214063.6529.82260252.008101.0719014.8716013.61400HepG2CELF1
TSPAN4ENSG00000214063.6395.01230271.020900.543402.286201.60380HepG2DAZAP1
TSPAN4ENSG00000214063.695.55100204.33950-1.096603.088702.37490HepG2DDX21
TSPAN4ENSG00000214063.674.50860200.33260-1.426903.639302.58250HepG2DDX24
TSPAN4ENSG00000214063.6123.50490252.46400-1.031503.484602.05520HepG2DDX27
TSPAN4ENSG00000214063.6530.84630269.913100.975705.670104.61030HepG2DDX55
TSPAN4ENSG00000214063.6168.34250281.51270-0.741804.232002.98960HepG2DDX5
TSPAN4ENSG00000214063.61584.26950417.710101.923109.838008.75030HepG2DDX6
TSPAN4ENSG00000214063.6129.10760497.98620-1.9475013.4965012.23070HepG2DKC1
TSPAN4ENSG00000214063.6281.31480124.983801.1703010.718709.40980HepG2DNAJC21
TSPAN4ENSG00000214063.6247.67860123.877400.999508.585207.51310HepG2DNAJC2
TSPAN4ENSG00000214063.6674.98580401.208100.750402.216001.67930HepG2EIF2S1
TSPAN4ENSG00000214063.6360.38700256.098000.492802.421001.65600HepG2EIF4G2
TSPAN4ENSG00000214063.6129.84640320.93550-1.305505.109503.67050HepG2ESF1
TSPAN4ENSG00000214063.6331.43710508.52780-0.617603.194402.29870HepG2EWSR1
TSPAN4ENSG00000214063.6641.51460374.242800.777403.874902.97650HepG2FIP1L1
TSPAN4ENSG00000214063.6705.81500415.033200.766003.050402.35330HepG2G3BP1
TSPAN4ENSG00000214063.6306.14140204.277300.583602.336501.40370HepG2GNB2L1
TSPAN4ENSG00000214063.6108.48270192.86140-0.830103.433002.72610HepG2GPKOW
TSPAN4ENSG00000214063.692.33580189.65830-1.038405.044902.58540HepG2GRWD1
TSPAN4ENSG00000214063.6710.72980496.879900.516302.289701.39460HepG2HDGF
TSPAN4ENSG00000214063.6443.45250203.143401.126207.900705.49270HepG2HNRNPA0
TSPAN4ENSG00000214063.6834.56300420.882200.987505.258904.31900HepG2HNRNPK
TSPAN4ENSG00000214063.6455.58840246.894500.8837010.485809.25180HepG2HNRNPL
TSPAN4ENSG00000214063.6261.76290184.051900.508002.048401.49820HepG2HNRNPLL
TSPAN4ENSG00000214063.6357.08960139.424501.356704.903304.11580HepG2HNRNPU
TSPAN4ENSG00000214063.6271.51310419.56180-0.627903.353601.99410HepG2HSPD1
TSPAN4ENSG00000214063.6266.16570142.417600.902107.463606.32240HepG2ILF2
TSPAN4ENSG00000214063.6435.97300200.212001.1226010.363708.29290HepG2LARP7
TSPAN4ENSG00000214063.6173.82720460.81420-1.406502.700402.07440HepG2NCBP2
TSPAN4ENSG00000214063.6842.35200268.741001.6481010.196608.76620HepG2NOL12
TSPAN4ENSG00000214063.691.51990163.20320-0.834503.086802.29770HepG2NSUN2
TSPAN4ENSG00000214063.6611.03690219.288101.4783012.6598010.72460HepG2PABPC1
TSPAN4ENSG00000214063.6703.42280410.076800.778403.003002.25250HepG2PABPC4
TSPAN4ENSG00000214063.6263.91430124.355601.085509.260707.95500HepG2PPIL4
TSPAN4ENSG00000214063.6129.27760270.43280-1.064809.132607.84290HepG2PRPF4
TSPAN4ENSG00000214063.689.45660208.03780-1.217604.625503.61000HepG2PRPF8
TSPAN4ENSG00000214063.6492.23090256.522900.940105.343704.54950HepG2PUF60
TSPAN4ENSG00000214063.6624.22040272.294001.1968023.5078022.12320HepG2PUM1
TSPAN4ENSG00000214063.6533.52240272.105300.9713010.961409.67540HepG2PUM2
TSPAN4ENSG00000214063.6333.48090530.19360-0.668903.140402.49310HepG2PUS1
TSPAN4ENSG00000214063.6453.04990747.27550-0.722003.208202.66110HepG2RBM22
TSPAN4ENSG00000214063.6312.15800468.06360-0.584404.588103.92370HepG2NELFE
TSPAN4ENSG00000214063.6325.90330435.96300-0.419802.672502.06500HepG2RECQL
TSPAN4ENSG00000214063.6155.23500286.44040-0.883805.338204.43130HepG2RPLP0
TSPAN4ENSG00000214063.6129.73110197.66490-0.607502.585001.98960HepG2RPS19
TSPAN4ENSG00000214063.6444.04070227.298300.966007.303705.57720HepG2RPS5
TSPAN4ENSG00000214063.6321.68550124.164201.3733012.2175011.00950HepG2SAFB2
TSPAN4ENSG00000214063.6129.60090253.59980-0.968504.895103.98210HepG2SF3A3
TSPAN4ENSG00000214063.6105.03260182.17020-0.794403.312802.54740HepG2SF3B1
TSPAN4ENSG00000214063.6327.97480437.85940-0.416902.566201.99290HepG2SF3B4
TSPAN4ENSG00000214063.6435.82950245.931900.825407.910906.81670HepG2SLBP
TSPAN4ENSG00000214063.6305.33290144.797301.0762010.723709.59030HepG2SMN1
TSPAN4ENSG00000214063.6510.86090162.488901.652508.188606.49860HepG2SMNDC1
TSPAN4ENSG00000214063.6391.45250843.96990-1.108406.009205.34900HepG2SRFBP1
TSPAN4ENSG00000214063.6219.11590457.04280-1.0606012.4416011.59440HepG2SRSF1
TSPAN4ENSG00000214063.6726.57060253.259401.5204034.7011032.83520HepG2SRSF5
TSPAN4ENSG00000214063.6481.78790371.839300.373602.045701.55660HepG2SRSF9
TSPAN4ENSG00000214063.6111.44620732.67800-2.7168018.4930017.41700HepG2SSB
TSPAN4ENSG00000214063.6679.19840288.042501.2375024.3762022.82530HepG2SUCLG1
TSPAN4ENSG00000214063.6175.18450410.84220-1.229708.269807.38540HepG2TAF15
TSPAN4ENSG00000214063.6260.54790179.415600.538102.368301.69020HepG2TARDBP
TSPAN4ENSG00000214063.6190.18440410.76940-1.110903.503702.30930HepG2TBRG4
TSPAN4ENSG00000214063.6383.73640180.030201.091807.586206.08050HepG2TFIP11
TSPAN4ENSG00000214063.6365.02400136.687701.417009.766208.80520HepG2TRIM56
TSPAN4ENSG00000214063.6625.04900250.585301.318602.530201.69770HepG2TUFM
TSPAN4ENSG00000214063.6123.69440320.00530-1.371305.283904.43180HepG2U2AF1
TSPAN4ENSG00000214063.61003.67930265.223001.9199011.240809.50080HepG2UBE2L3
TSPAN4ENSG00000214063.6377.71210158.660101.2512010.916409.41930HepG2UCHL5
TSPAN4ENSG00000214063.6424.48510216.018400.974503.755402.47300HepG2XPO5
TSPAN4ENSG00000214063.6161.91170264.45080-0.707802.182801.53280HepG2XRN2
TSPAN4ENSG00000214063.6182.55820266.88280-0.547903.206602.49240HepG2ZC3H8
TSPAN4ENSG00000214063.6216.16800153.338800.495301.996901.49980K562AGGF1
TSPAN4ENSG00000214063.6107.53410261.32510-1.281108.337207.40700K562AQR
TSPAN4ENSG00000214063.6167.1712099.451900.749203.267201.81480K562BCCIP
TSPAN4ENSG00000214063.6153.2305096.090400.673102.702301.75300K562BCLAF1
TSPAN4ENSG00000214063.6155.0637072.898801.088805.082003.58350K562CSTF2
TSPAN4ENSG00000214063.6228.05000333.58520-0.548702.966401.95750K562CELF1
TSPAN4ENSG00000214063.6158.0664084.279400.907204.926103.14540K562DDX27
TSPAN4ENSG00000214063.6245.00050151.670700.691704.261102.52820K562DDX6
TSPAN4ENSG00000214063.6228.82110136.458600.745703.347602.56830K562EIF2S2
TSPAN4ENSG00000214063.688.9508048.836000.865002.571901.80380K562EIF3G
TSPAN4ENSG00000214063.685.92570156.29130-0.863103.823802.86280K562EIF4A3
TSPAN4ENSG00000214063.699.23710162.53650-0.711803.001802.37500K562FXR1
TSPAN4ENSG00000214063.62.7527019.02590-2.789002.938202.20690K562G3BP2
TSPAN4ENSG00000214063.657.5478028.029901.037702.111901.41460K562GPKOW
TSPAN4ENSG00000214063.667.73240111.31250-0.716702.094201.56530K562HNRNPC
TSPAN4ENSG00000214063.6178.2079077.913701.193502.607601.62160K562IGF2BP2
TSPAN4ENSG00000214063.6160.5803081.727600.974304.786303.53820K562MATR3
TSPAN4ENSG00000214063.694.48840156.06530-0.723902.874701.62160K562NCBP2
TSPAN4ENSG00000214063.6188.0586074.892401.328203.929502.32220K562NONO
TSPAN4ENSG00000214063.6172.5048079.563101.116406.730605.73130K562PTBP1
TSPAN4ENSG00000214063.6141.2441076.296000.888402.278901.52100K562RBM22
TSPAN4ENSG00000214063.6117.70960186.51880-0.664102.540501.63820K562SRPK2
TSPAN4ENSG00000214063.6134.2181073.660400.865503.521402.31210K562SRSF5
TSPAN4ENSG00000214063.6166.4609076.146501.128206.035104.75690K562TIA1
TSPAN4ENSG00000214063.6126.6399074.717600.761102.559101.51490K562TRA2A
TSPAN4ENSG00000214063.6219.09760309.63490-0.499002.609201.36080K562WRN
TSPAN4ENSG00000214063.6163.4529076.995801.085902.632301.46080K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TSPAN4 is not available on ENCORE database.





11 RBPs can affect the splicing of TSPAN4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETSPAN4ENSG00000214063.6chr11+850287850367847200847300862549862741-0.339000.000190.00297excludedK562AQR
SETSPAN4ENSG00000214063.6chr11+8502878503678472008473008625498627410.267000.000460.02550includedHepG2SFPQ
SETSPAN4ENSG00000214063.6chr11+8502878503678472008473008644368646530.236000.002210.07107includedHepG2HNRNPC
RITSPAN4ENSG00000214063.6chr11+8655128658258655128656148656938658250.077000.001050.02840includedHepG2UCHL5
MXETSPAN4ENSG00000214063.6chr11+850287850367862549862741847200847300864436864511-0.173000.001520.032412includedHepG2SRSF1
MXETSPAN4ENSG00000214063.6chr11+850287850367862549862741847200847300864436864511-0.245000.000270.013122includedHepG2TAF15
MXETSPAN4ENSG00000214063.6chr11+8502878503678625498627418472008473008644368645110.268000.004830.099861includedK562EFTUD2
MXETSPAN4ENSG00000214063.6chr11+8502878503678625498627418472008473008644368645110.231000.000150.036931includedHepG2LARP7
MXETSPAN4ENSG00000214063.6chr11+8502878503678625498627418472008473008644368645110.278000.000840.028021includedHepG2HNRNPU
MXETSPAN4ENSG00000214063.6chr11+8472008473008502878503678429408430508625498627410.194000.001640.072211includedHepG2DDX6
MXETSPAN4ENSG00000214063.6chr11+8502878503678625498627418472008473008644368645110.307000.003100.057341includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TSPAN4 is not avaliable on ENCORE database.