TOMM7

General Information

Gene Name       : TOMM7
Gene ID             : ENSG00000196683.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TOMM7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TOMM7ENSG00000196683.1067.50102.7585.12ENCSR000AEF
HepG2TOMM7ENSG00000196683.1082.6977.6980.19ENCSR985KAT
K562TOMM7ENSG00000196683.10189.90190.68190.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TOMM7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TOMM7 RNA is bound by 17 proteins.  







eCLIP assay for TOMM7 is not avaliable on ENCORE database.





17 proteins are bound to TOMM7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr72285271422852782-3'-UTR,CDS,intron-Distal4.9026411.85556K562ZNF800
chr72285270722852789-3'-UTR,CDS,intron-Distal3.051329.30328K562GRWD1
chr72285272322852781-3'-UTR,CDS,intron-Distal5.482137.26658HepG2LIN28B
chr72285269622852784-3'-UTR,CDS,intron-Distal3.4859812.48610K562DDX6
chr72285271822852781-3'-UTR,CDS,intron-Distal3.0511412.59619HepG2SUB1
chr72285271722852802-3'-UTR,CDS,intron-Distal5.6057719.22875HepG2LARP4
chr72285265722852784-3'-UTR,CDS,intron-Distal4.699359.59940K562PUM1
chr72285272122852792-3'-UTR,CDS,intron-Distal3.0858113.67362K562GEMIN5
chr72285272222852787-3'-UTR,CDS,intron-Distal4.9114759.31616K562LIN28B
chr72286235522862461-5'-UTR,CDS,intron-Distal,intron-Proximal3.235519.02188K562DROSHA
chr72286238122862445-5'-UTR,CDS,intron-Distal,intron-Proximal5.6595311.78230HepG2DDX3X
chr72286238822862463-5'-UTR,CDS,intron-Distal,intron-Proximal4.6283086.94719K562PABPC4
chr72286238722862457-5'-UTR,CDS,intron-Distal,intron-Proximal4.339353.48132K562EIF3G
chr72286238522862465-5'-UTR,CDS,intron-Distal,intron-Proximal5.3116318.40906HepG2LARP4
chr72286234222862441-5'-UTR,CDS,intron-Distal,intron-Proximal3.310297.23772HepG2SUB1
chr72286239322862461-5'-UTR,CDS,intron-Distal,intron-Proximal4.95867400.00000K562DDX3X
chr72286239022862463-5'-UTR,CDS,intron-Distal,intron-Proximal3.412746.85965K562APOBEC3C
chr72286238222862454-5'-UTR,CDS,intron-Distal,intron-Proximal4.9037610.92204K562RPS3
chr72286238322862437-5'-UTR,CDS,intron-Distal,intron-Proximal3.8522015.66463K562GEMIN5
chr72286238622862457-5'-UTR,CDS,intron-Distal,intron-Proximal6.1762312.71563K562LARP4
chr72286230222862370-CDS,intron-Distal3.1753524.34310K562PABPC4
chr72286237422862393-CDS,intron-Distal4.1225351.05685K562DDX3X
chr72285763822857696-CDS,intron-Distal,intron-Proximal3.483407.17950K562AQR
chr72286237022862387-CDS,intron-Distal3.1079213.53554K562YBX3
chr72286229522862307-CDS,intron-Distal5.051164.31023HepG2LIN28B
chr72285758422857644-CDS,intron-Distal,intron-Proximal3.676805.73990HepG2PRPF8
chr72285762322857670-CDS,intron-Distal,intron-Proximal6.2126510.26259HepG2LIN28B
chr72286233322862348-CDS,intron-Distal3.860599.41329K562AQR
chr72285762422857668-CDS,intron-Distal,intron-Proximal3.1699533.62133K562DDX3X
chr72286235322862368-CDS,intron-Distal3.2998421.55928K562YBX3
chr72285279322852804-CDS,intron-Distal5.7892314.82377K562LIN28B
chr72285762422857669-CDS,intron-Distal,intron-Proximal3.712419.11529HepG2LARP4
chr72286238722862398-CDS,intron-Distal3.2737012.72545K562YBX3
chr72285762322857664-CDS,intron-Distal4.321444.02861K562APOBEC3C
chr72286234722862374-CDS,intron-Distal4.0087429.35304K562DDX3X
chr72285761822857668-CDS,intron-Distal,intron-Proximal6.95955160.78530K562LIN28B
chr72286229522862328-CDS,intron-Distal6.1006479.05309K562LIN28B
chr72286230122862333-CDS,intron-Distal4.0314213.89524K562AQR
chr72286224122862301-CDS,intron-Distal3.563486.65588K562AQR
chr72286229522862308-CDS,intron-Distal3.298834.48159HepG2LARP4
chr72286229422862347-CDS,intron-Distal3.5953535.68700K562DDX3X
chr72286230822862358-CDS,intron-Distal3.956935.47244HepG2LARP4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TOMM7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TOMM7 is not available on ENCORE database.

  • 95 RBPs can affect the levels of TOMM7.  








The Knockdown/knockout RNA-Seq assay for TOMM7 is not available on ENCORE database.





95 RBPs can affect the gene expression of TOMM7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TOMM7ENSG00000196683.6442.19820635.77470-0.523803.954702.69100HepG2AATF
TOMM7ENSG00000196683.6457.82940703.36400-0.619508.408107.46550HepG2ACO1
TOMM7ENSG00000196683.61364.500701892.55230-0.472002.879202.33720HepG2AKAP1
TOMM7ENSG00000196683.6265.05060440.97740-0.734402.492201.50240HepG2AKAP8
TOMM7ENSG00000196683.6568.28280706.61980-0.314302.544101.80530HepG2AKAP8L
TOMM7ENSG00000196683.61057.719101313.38930-0.312303.560202.79870HepG2AUH
TOMM7ENSG00000196683.6519.14200714.20850-0.460202.469301.62070HepG2BCLAF1
TOMM7ENSG00000196683.6979.76670703.152500.478507.068206.09560HepG2CKAP4
TOMM7ENSG00000196683.6925.06000686.425000.430303.750502.67560HepG2DDX24
TOMM7ENSG00000196683.6880.413601557.15310-0.822705.311604.48130HepG2DDX6
TOMM7ENSG00000196683.6998.030401497.21710-0.585105.212704.41390HepG2EIF2S1
TOMM7ENSG00000196683.61280.663701654.74010-0.369702.288401.70470HepG2EIF4A3
TOMM7ENSG00000196683.61090.447101507.96840-0.467707.584606.67200HepG2ETF1
TOMM7ENSG00000196683.61210.344501669.14200-0.463703.875103.06560HepG2FXR1
TOMM7ENSG00000196683.61255.581701643.74310-0.388602.966402.04310HepG2G3BP2
TOMM7ENSG00000196683.6199.81740308.72630-0.627603.289402.30170HepG2GEMIN5
TOMM7ENSG00000196683.6476.62340671.47570-0.494505.383904.06870HepG2HDGF
TOMM7ENSG00000196683.61059.599301567.57580-0.565005.997904.99850HepG2HNRNPK
TOMM7ENSG00000196683.61020.219401574.19250-0.625704.863103.99090HepG2IGF2BP2
TOMM7ENSG00000196683.6797.014501476.99400-0.890003.318002.23870HepG2IGF2BP3
TOMM7ENSG00000196683.61024.684501583.22120-0.627702.178301.30190HepG2KHSRP
TOMM7ENSG00000196683.6880.924301669.72280-0.922509.213608.02870HepG2MAGOH
TOMM7ENSG00000196683.6762.494101679.13660-1.1389014.6997013.32740HepG2MATR3
TOMM7ENSG00000196683.6902.848801718.74540-0.928809.060507.95360HepG2NCBP2
TOMM7ENSG00000196683.6558.351701530.91090-1.4551017.8664016.08310HepG2PABPC4
TOMM7ENSG00000196683.6948.690201430.42790-0.5924011.1052010.02180HepG2PCBP1
TOMM7ENSG00000196683.6484.89560388.647900.319102.041601.36950HepG2PRPF4
TOMM7ENSG00000196683.6725.483701455.54230-1.0045027.5162026.13850HepG2PTBP1
TOMM7ENSG00000196683.6902.690901262.26670-0.483705.405804.48280HepG2PUM2
TOMM7ENSG00000196683.61145.500401576.32760-0.460605.950605.08290HepG2QKI
TOMM7ENSG00000196683.6383.73370633.09010-0.722303.550602.75490HepG2RAVER1
TOMM7ENSG00000196683.6686.281601430.64150-1.0598021.4390019.66910HepG2RBM25
TOMM7ENSG00000196683.6815.504201619.85520-0.9901027.5040026.16180HepG2NELFE
TOMM7ENSG00000196683.6894.447001508.71790-0.7543017.0050015.68850HepG2RECQL
TOMM7ENSG00000196683.6232.19800337.42880-0.539203.145302.49610HepG2RPS19
TOMM7ENSG00000196683.6612.41560829.78560-0.438203.075802.23170HepG2RPS2
TOMM7ENSG00000196683.6655.026301018.18060-0.636404.533503.51150HepG2RPS3A
TOMM7ENSG00000196683.6689.79860482.487200.515606.021905.12660HepG2SAFB2
TOMM7ENSG00000196683.6902.593401515.35640-0.7475016.6237015.35980HepG2SF3B4
TOMM7ENSG00000196683.6101.41820257.09530-1.342002.635101.87350HepG2SNRNP70
TOMM7ENSG00000196683.61135.452501423.54260-0.326204.187703.60900HepG2SRFBP1
TOMM7ENSG00000196683.61096.276801581.72480-0.528909.707908.94400HepG2SRSF1
TOMM7ENSG00000196683.6972.025501174.94620-0.273502.013301.46860HepG2SRSF5
TOMM7ENSG00000196683.6845.197301286.83530-0.6065011.6766010.68240HepG2SRSF9
TOMM7ENSG00000196683.6971.723101336.18990-0.459507.166706.24630HepG2SUCLG1
TOMM7ENSG00000196683.61078.454801421.77380-0.398704.878504.16670HepG2TAF15
TOMM7ENSG00000196683.6946.108901306.35500-0.465503.099202.21990HepG2TIA1
TOMM7ENSG00000196683.6386.56240635.81160-0.717904.288002.48350HepG2TRA2A
TOMM7ENSG00000196683.6678.18680531.143800.352503.151002.55820HepG2TRIM56
TOMM7ENSG00000196683.6818.178301230.63830-0.588904.405403.33200HepG2UBE2L3
TOMM7ENSG00000196683.6401.31150622.68400-0.633803.190301.82720HepG2XRCC5
TOMM7ENSG00000196683.6423.49270696.30670-0.717404.781103.40730HepG2XRCC6
TOMM7ENSG00000196683.61111.31600791.897100.488804.106703.23180HepG2XRN2
TOMM7ENSG00000196683.6419.72240632.64830-0.592003.548602.06880HepG2ZRANB2
TOMM7ENSG00000196683.6889.797801262.79460-0.505104.989803.34680K562AARS
TOMM7ENSG00000196683.63967.777802105.438300.9141026.2176024.58180K562AGGF1
TOMM7ENSG00000196683.63988.439002190.842100.8642018.7618016.76170K562AKAP8L
TOMM7ENSG00000196683.63139.345402298.792700.449508.343606.62760K562ATP5C1
TOMM7ENSG00000196683.6598.908101051.43560-0.812006.666204.85410K562CCAR1
TOMM7ENSG00000196683.6962.67320759.567200.341802.632501.86600K562CPSF6
TOMM7ENSG00000196683.61341.014501845.50820-0.460707.810706.79210K562DDX47
TOMM7ENSG00000196683.6830.364101176.97830-0.503303.813002.20450K562DHX30
TOMM7ENSG00000196683.62941.515102357.264100.319304.812303.60590K562DKC1
TOMM7ENSG00000196683.62570.417303004.46510-0.225102.527301.83390K562EIF2S2
TOMM7ENSG00000196683.6426.273701069.53330-1.3271010.366508.39930K562EIF3A
TOMM7ENSG00000196683.61950.018802554.99250-0.389803.947603.00490K562EIF3G
TOMM7ENSG00000196683.62150.070502733.40300-0.346303.434801.63740K562FASTKD2
TOMM7ENSG00000196683.61846.522401204.785500.615904.802303.66350K562FIP1L1
TOMM7ENSG00000196683.6868.854201199.55820-0.465303.593902.28310K562FKBP4
TOMM7ENSG00000196683.64275.447603264.427900.389104.724802.80200K562G3BP1
TOMM7ENSG00000196683.61497.416702589.63330-0.790308.150006.80820K562G3BP2
TOMM7ENSG00000196683.65774.235304003.774500.528208.874607.49970K562GRSF1
TOMM7ENSG00000196683.6999.110801381.82820-0.467904.904904.13270K562HNRNPC
TOMM7ENSG00000196683.61216.451501712.86110-0.493705.997403.23540K562HNRNPH1
TOMM7ENSG00000196683.62110.318201667.869800.339403.338702.16470K562HNRNPL
TOMM7ENSG00000196683.61881.17440991.117900.9244011.695009.45120K562HNRNPM
TOMM7ENSG00000196683.62764.005003532.64470-0.354005.206003.96660K562HNRNPU
TOMM7ENSG00000196683.62642.531401633.202600.694105.443604.34430K562HSPD1
TOMM7ENSG00000196683.63840.660602324.897500.7241014.7284012.28320K562KIF1C
TOMM7ENSG00000196683.62870.330002225.607300.366902.499001.49490K562MAK16
TOMM7ENSG00000196683.62834.902901825.571300.634902.096501.35080K562NAA15
TOMM7ENSG00000196683.61986.027601683.220900.238603.698002.84900K562NSUN2
TOMM7ENSG00000196683.61267.108602070.57040-0.708508.292806.85450K562PCBP3
TOMM7ENSG00000196683.61208.376101588.20560-0.394304.067203.09210K562POLR2G
TOMM7ENSG00000196683.62782.333101367.907201.0242012.6017010.46260K562PPIG
TOMM7ENSG00000196683.62914.837502349.859000.310702.593801.86790K562PRPF8
TOMM7ENSG00000196683.61571.651101238.944300.343102.738501.83950K562PSIP1
TOMM7ENSG00000196683.62856.597003486.44420-0.287502.944602.26220K562PTBP1
TOMM7ENSG00000196683.64928.336702172.441901.1817029.6421027.84370K562PUS1
TOMM7ENSG00000196683.63431.520502116.943000.696807.993307.01670K562RBM15
TOMM7ENSG00000196683.62721.685703342.54880-0.296402.543801.74170K562RBM22
TOMM7ENSG00000196683.61380.348602393.71000-0.794209.566608.03390K562RPS19
TOMM7ENSG00000196683.61086.221401863.72130-0.7789010.201408.14910K562RPS3
TOMM7ENSG00000196683.6892.220401415.10610-0.665405.146503.67240K562SAFB
TOMM7ENSG00000196683.61012.775401463.06600-0.530702.877801.40220K562SDAD1
TOMM7ENSG00000196683.62300.403801661.002100.469708.347206.99030K562SF3A3
TOMM7ENSG00000196683.63244.985302692.104000.269402.766301.91160K562SF3B4
TOMM7ENSG00000196683.61633.241102346.10390-0.522506.737903.95410K562SND1
TOMM7ENSG00000196683.62613.873203417.98760-0.387003.893903.06110K562SRSF1
TOMM7ENSG00000196683.61283.499701807.77060-0.494106.627704.24710K562SRSF9
TOMM7ENSG00000196683.61054.954001505.33720-0.512904.535702.25180K562TRNAU1AP
TOMM7ENSG00000196683.63483.404802202.905100.661003.857102.24190K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TOMM7 is not available on ENCORE database.





1 RBPs can affect the splicing of TOMM7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETOMM7ENSG00000196683.6chr7-228576182285765922852589228528042286229522862410-0.084000.000000.00001excludedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TOMM7 is not avaliable on ENCORE database.