SH3GLB2

General Information

Gene Name       : SH3GLB2
Gene ID             : ENSG00000148341.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SH3GLB2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SH3GLB2ENSG00000148341.174.4421.4612.95ENCSR000AEF
HepG2SH3GLB2ENSG00000148341.1726.4212.0019.21ENCSR985KAT
K562SH3GLB2ENSG00000148341.1749.5842.5946.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SH3GLB2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SH3GLB2 RNA is bound by 23 proteins.  







eCLIP assay for SH3GLB2 is not avaliable on ENCORE database.





23 proteins are bound to SH3GLB2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9131776693131776757-3'-UTR,CDS,intron-Distal,intron-Proximal3.873723.66700HepG2SRSF1
chr9131771497131771540-3'-UTR,CDS,intron-Distal,intron-Proximal4.063964.47485K562DDX55
chr9131770710131770783-3'-UTR,intron-Distal,intron-Proximal4.7698614.35538K562UPF1
chr9131771499131771552-3'-UTR,CDS,intron-Distal,intron-Proximal3.941593.19682HepG2PABPN1
chr9131772410131772456-3'-UTR,CDS,intron-Distal3.489816.00788HepG2PPIG
chr9131776712131776781-3'-UTR,CDS,intron-Distal,intron-Proximal3.200846.40565K562DDX24
chr9131771496131771568-3'-UTR,CDS,intron-Distal,intron-Proximal3.076883.69775K562YBX3
chr9131776688131776783-3'-UTR,CDS,intron-Distal,intron-Proximal5.4033911.68917HepG2PPIG
chr9131772128131772151-3'-UTR,CDS,intron-Distal,intron-Proximal4.073394.02733K562DDX55
chr9131772007131772068-3'-UTR,CDS,intron-Distal,intron-Proximal4.942349.46915K562AQR
chr9131770906131770961-3'-UTR,intron-Distal,intron-Proximal3.195684.29664K562DDX6
chr9131770924131771009-3'-UTR,CDS,intron-Distal,intron-Proximal4.248083.19682HepG2PABPN1
chr9131770893131770942-3'-UTR,intron-Distal,intron-Proximal4.282348.17454K562UPF1
chr9131772455131772522-3'-UTR,CDS,intron-Distal,intron-Proximal3.180535.24703K562BUD13
chr9131770713131770827-3'-UTR,intron-Distal,intron-Proximal4.9483015.89295K562DDX55
chr9131770794131770879-3'-UTR,intron-Distal,intron-Proximal3.183843.27723HepG2AKAP1
chr9131770633131770842-3'-UTR,intron-Distal,intron-Proximal4.4380514.36858HepG2UPF1
chr9131772460131772528-3'-UTR,CDS,intron-Distal,intron-Proximal5.6621318.10317K562SF3B4
chr9131770604131770685-3'-UTR,intron-Distal,intron-Proximal4.8768513.02031K562UPF1
chr9131772051131772094-3'-UTR,CDS,intron-Distal4.127125.52342HepG2PPIG
chr9131770457131770539-3'-UTR,intron-Distal4.365734.93188HepG2UPF1
chr9131772471131772536-3'-UTR,CDS,intron-Distal,intron-Proximal4.7381613.98010HepG2SF3A3
chr9131770701131770794-3'-UTR,intron-Distal,intron-Proximal3.933326.88718HepG2AKAP1
chr9131772396131772478-3'-UTR,CDS,intron-Distal,intron-Proximal3.360863.97821HepG2PABPN1
chr9131770783131770856-3'-UTR,intron-Distal3.8119012.09907K562UPF1
chr9131771469131771540-3'-UTR,CDS,intron-Distal,intron-Proximal3.244233.75706HepG2LSM11
chr9131770323131770380-3'-UTR,intron-Distal,intron-Proximal3.795619.00887K562UPF1
chr9131770913131770999-3'-UTR,CDS,intron-Distal,intron-Proximal3.266046.38147K562DDX55
chr9131770715131770886-3'-UTR,intron-Distal,intron-Proximal3.772528.82682HepG2LSM11
chr9131772396131772410-3'-UTR,CDS,intron-Distal,intron-Proximal3.797044.51003HepG2PPIG
chr9131774496131774515-3'-UTR,intron-Distal,intron-Proximal3.204124.83230K562AQR
chr9131770523131770592-3'-UTR,intron-Distal4.2177010.12876K562UPF1
chr9131772397131772441-3'-UTR,CDS,intron-Distal,intron-Proximal4.100974.47485K562DDX55
chr9131790406131790551-5'-UTR,CDS,intron-Distal,intron-Proximal3.226199.15991K562GEMIN5
chr9131790447131790538-5'-UTR,intron-Distal,intron-Proximal3.233635.21373HepG2PRPF4
chr9131790432131790562-5'-UTR,CDS,intron-Distal,intron-Proximal3.447474.69646HepG2UPF1
chr9131790507131790573-5'-UTR,intron-Distal,intron-Proximal4.248924.78731HepG2NCBP2
chr9131790424131790532-5'-UTR,CDS,intron-Distal,intron-Proximal3.5928611.16701K562DDX24
chr9131790429131790536-5'-UTR,CDS,intron-Distal,intron-Proximal3.4219910.42222K562DDX55
chr9131790420131790507-5'-UTR,CDS,intron-Distal,intron-Proximal3.681664.27210HepG2NCBP2
chr9131784559131784609-CDS,intron-Distal,intron-Proximal4.2343810.43162HepG2PPIG
chr9131783478131783499-CDS,intron-Distal,intron-Proximal4.744184.97342HepG2PPIG
chr9131790318131790393-CDS,intron-Distal3.364996.74268HepG2PRPF8
chr9131784609131784649-CDS,intron-Distal3.299454.77136HepG2PPIG
chr9131790325131790374-CDS,intron-Distal5.404328.34710K562AQR
chr9131773832131773875-intron-Distal3.834646.55430HepG2RBFOX2
chr9131772840131772942-intron-Distal,intron-Proximal3.5042512.87920K562EFTUD2
chr9131773758131773801-intron-Distal3.896706.35159HepG2RBFOX2
chr9131774123131774161-intron-Distal3.127124.63569HepG2RBFOX2
chr9131773113131773197-intron-Distal3.289586.13210HepG2RBFOX2
chr9131772862131772914-intron-Distal,intron-Proximal3.934095.98771K562GTF2F1
chr9131774015131774100-intron-Distal3.2625013.91346HepG2RBFOX2
chr9131774017131774061-intron-Distal3.321005.26861K562DDX24
chr9131790085131790143-intron-Distal3.863973.38470HepG2NKRF
chr9131772849131772935-intron-Distal,intron-Proximal3.1462110.47025K562PRPF8
chr9131774416131774496-intron-Distal,intron-Proximal4.3748810.93035K562AQR
chr9131774018131774086-intron-Distal3.346004.69671HepG2PPIG
chr9131773900131773987-intron-Distal,intron-Proximal5.4270823.25140HepG2RBFOX2
chr9131776278131776360-intron-Distal,intron-Proximal5.102045.61339K562QKI
chr9131772976131773047-intron-Distal,intron-Proximal3.5705111.35663K562AQR
chr9131773921131773995-intron-Distal,intron-Proximal3.448934.41726HepG2NKRF
chr9131773241131773273-intron-Distal3.430985.31369K562PRPF8
chr9131772857131772942-intron-Distal,intron-Proximal4.6155614.03805HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SH3GLB2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SH3GLB2 is not available on ENCORE database.

  • 93 RBPs can affect the levels of SH3GLB2.  








The Knockdown/knockout RNA-Seq assay for SH3GLB2 is not available on ENCORE database.





93 RBPs can affect the gene expression of SH3GLB2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SH3GLB2ENSG00000148341.13561.65680770.94230-0.456903.386102.72440HepG2ACO1
SH3GLB2ENSG00000148341.131172.86370816.776500.521902.811502.27610HepG2AKAP1
SH3GLB2ENSG00000148341.13867.94140469.586700.886107.189705.63830HepG2BCCIP
SH3GLB2ENSG00000148341.13582.95270407.970700.514802.618801.74230HepG2BCLAF1
SH3GLB2ENSG00000148341.13691.14030476.515900.536404.213203.49260HepG2BOP1
SH3GLB2ENSG00000148341.13490.08110642.04120-0.389602.224801.52680HepG2CIRBP
SH3GLB2ENSG00000148341.13601.88810770.62860-0.356503.462202.73380HepG2CKAP4
SH3GLB2ENSG00000148341.13582.64420384.026400.601302.921002.13460HepG2CNOT7
SH3GLB2ENSG00000148341.13567.39750442.099500.359902.037201.44460HepG2DDX21
SH3GLB2ENSG00000148341.13290.20460432.55760-0.575804.081302.96070HepG2DDX24
SH3GLB2ENSG00000148341.13721.79720461.734300.644403.791302.90160HepG2DDX55
SH3GLB2ENSG00000148341.131088.11810672.252800.694706.007505.12550HepG2DDX6
SH3GLB2ENSG00000148341.13615.97810398.264200.629106.934805.86160HepG2DNAJC21
SH3GLB2ENSG00000148341.13659.75020394.788300.7407011.7120010.47090HepG2DNAJC2
SH3GLB2ENSG00000148341.131237.65760646.024200.9379012.0803010.89600HepG2EIF2S1
SH3GLB2ENSG00000148341.13922.76410695.217200.408401.981601.39260HepG2EIF4B
SH3GLB2ENSG00000148341.13586.52000753.21870-0.360902.585601.77920HepG2EWSR1
SH3GLB2ENSG00000148341.13958.28980720.551300.411302.740002.05210HepG2FXR1
SH3GLB2ENSG00000148341.131024.39850668.240900.616205.184204.28630HepG2G3BP1
SH3GLB2ENSG00000148341.13899.36880735.940600.289202.377001.46510HepG2HDGF
SH3GLB2ENSG00000148341.13484.47770325.089500.575503.030101.59960HepG2HNRNPA0
SH3GLB2ENSG00000148341.13568.87150402.080100.500502.226501.64200HepG2HNRNPA1
SH3GLB2ENSG00000148341.13827.84640671.132700.302702.722002.05380HepG2HNRNPL
SH3GLB2ENSG00000148341.13710.45860444.295400.677109.562508.48940HepG2HNRNPU
SH3GLB2ENSG00000148341.13764.60330595.315300.361002.480701.79410HepG2IGF2BP1
SH3GLB2ENSG00000148341.13685.24140453.830700.594407.304006.17300HepG2ILF2
SH3GLB2ENSG00000148341.13528.95440720.80440-0.446502.800502.14180HepG2MAGOH
SH3GLB2ENSG00000148341.13548.33270724.78420-0.402502.109201.55390HepG2MATR3
SH3GLB2ENSG00000148341.131052.26080730.538900.526402.048801.39020HepG2NOL12
SH3GLB2ENSG00000148341.13471.54850287.866700.711903.482701.86230HepG2NOLC1
SH3GLB2ENSG00000148341.13307.10240419.61730-0.450402.243101.56700HepG2NSUN2
SH3GLB2ENSG00000148341.13590.75550396.273600.576005.868604.82610HepG2PPIL4
SH3GLB2ENSG00000148341.13406.13770545.17780-0.424803.542502.67700HepG2PRPF4
SH3GLB2ENSG00000148341.13937.94740693.568600.435405.092604.39750HepG2PTBP1
SH3GLB2ENSG00000148341.13502.21870697.34050-0.473503.834203.14550HepG2PUF60
SH3GLB2ENSG00000148341.13986.65320740.230900.414505.432204.65850HepG2PUM1
SH3GLB2ENSG00000148341.131037.78730739.706900.488405.023004.13370HepG2PUM2
SH3GLB2ENSG00000148341.131044.14830751.094500.475202.148601.58650HepG2QKI
SH3GLB2ENSG00000148341.131073.65110857.023800.325002.599701.76640HepG2RBM15
SH3GLB2ENSG00000148341.13673.460001011.05940-0.586207.903007.13210HepG2RBM22
SH3GLB2ENSG00000148341.13877.22810681.688200.363702.383501.75230HepG2RBM25
SH3GLB2ENSG00000148341.131060.14930771.852800.457805.642304.91300HepG2NELFE
SH3GLB2ENSG00000148341.13583.25460401.998100.536803.173602.52160HepG2RPS19
SH3GLB2ENSG00000148341.13801.97490500.411600.680305.430004.33110HepG2RPS2
SH3GLB2ENSG00000148341.13647.84500385.964700.747105.187104.09040HepG2RPS3A
SH3GLB2ENSG00000148341.13741.80410510.869100.538002.407801.40980HepG2RPS5
SH3GLB2ENSG00000148341.13586.58780395.656700.568004.862504.04880HepG2SAFB2
SH3GLB2ENSG00000148341.13558.90210403.341200.470502.606501.69550HepG2SERBP1
SH3GLB2ENSG00000148341.13399.54550692.03980-0.792505.624404.64220HepG2SF3A3
SH3GLB2ENSG00000148341.13659.13000461.389100.514506.133905.23550HepG2SMN1
SH3GLB2ENSG00000148341.13683.53110429.426300.670504.563403.30810HepG2SMNDC1
SH3GLB2ENSG00000148341.13535.22510753.67950-0.493805.178604.58330HepG2SRSF1
SH3GLB2ENSG00000148341.13399.79220613.17540-0.617007.236806.41940HepG2SRSF9
SH3GLB2ENSG00000148341.13769.51640991.45330-0.365604.171603.56910HepG2SSB
SH3GLB2ENSG00000148341.131088.69310783.030300.475403.560902.87210HepG2SUCLG1
SH3GLB2ENSG00000148341.13445.95600677.49130-0.603303.939303.28910HepG2TAF15
SH3GLB2ENSG00000148341.13647.21410431.665100.584205.634704.97040HepG2TIAL1
SH3GLB2ENSG00000148341.13602.76520435.578500.468604.723404.02610HepG2TRIM56
SH3GLB2ENSG00000148341.13997.28900681.228400.549804.187303.08490HepG2TUFM
SH3GLB2ENSG00000148341.13359.06980782.32200-1.1235010.162008.94140HepG2U2AF1
SH3GLB2ENSG00000148341.131027.61220721.040800.511003.245502.33940HepG2UBE2L3
SH3GLB2ENSG00000148341.13526.61360271.463500.955908.610607.26890HepG2UCHL5
SH3GLB2ENSG00000148341.13654.20390420.715400.636802.271501.36960HepG2UPF2
SH3GLB2ENSG00000148341.13378.98550592.53750-0.644806.997106.11860HepG2UTP3
SH3GLB2ENSG00000148341.13644.94750452.425400.511402.639701.93180HepG2XRN2
SH3GLB2ENSG00000148341.131328.276302595.93400-0.9667017.9336016.60670K562AQR
SH3GLB2ENSG00000148341.132074.379201570.251900.401606.766705.23680K562BCLAF1
SH3GLB2ENSG00000148341.131517.717401191.270200.349303.825902.55680K562CSTF2
SH3GLB2ENSG00000148341.132789.232902238.134800.317504.256302.73540K562DDX21
SH3GLB2ENSG00000148341.131757.954602379.49810-0.436808.076307.04050K562DDX47
SH3GLB2ENSG00000148341.132176.703301655.359600.394902.819601.47790K562DHX30
SH3GLB2ENSG00000148341.131025.055001503.86650-0.553002.705501.71570K562EIF3A
SH3GLB2ENSG00000148341.13940.657401433.26910-0.607602.285201.35570K562EIF3D
SH3GLB2ENSG00000148341.13823.365901345.80240-0.708909.439707.91480K562EIF4A3
SH3GLB2ENSG00000148341.132476.486301707.504200.536308.014105.83040K562EXOSC5
SH3GLB2ENSG00000148341.131810.387801353.888400.419104.065403.02340K562FIP1L1
SH3GLB2ENSG00000148341.131021.284001336.46400-0.388002.331401.54470K562FMR1
SH3GLB2ENSG00000148341.131010.036701399.57590-0.470606.679905.79790K562FXR1
SH3GLB2ENSG00000148341.13106.47220527.92220-2.3098020.5620018.09970K562G3BP2
SH3GLB2ENSG00000148341.13729.912401609.56570-1.140905.895305.05560K562HNRNPC
SH3GLB2ENSG00000148341.13806.533601113.62480-0.465503.335502.30580K562HNRNPM
SH3GLB2ENSG00000148341.131643.10010983.268300.740704.802203.29090K562IGF2BP2
SH3GLB2ENSG00000148341.13760.294101070.81190-0.494103.095702.10180K562KRR1
SH3GLB2ENSG00000148341.131398.745801030.376200.440903.003102.03810K562MATR3
SH3GLB2ENSG00000148341.13930.208301343.88010-0.530806.765604.87550K562NCBP2
SH3GLB2ENSG00000148341.133152.008802277.841200.4685015.4067013.83950K562NSUN2
SH3GLB2ENSG00000148341.132397.102701555.875400.623502.819101.81800K562PABPN1
SH3GLB2ENSG00000148341.132163.601501536.977700.493205.348404.14720K562PPIG
SH3GLB2ENSG00000148341.13556.873201303.21370-1.226705.989204.88510K562PRPF8
SH3GLB2ENSG00000148341.132036.118003484.12800-0.7750013.7235011.89760K562PUF60
SH3GLB2ENSG00000148341.132838.391103706.67540-0.385104.683703.26370K562PUM1
SH3GLB2ENSG00000148341.132648.282002278.694900.216702.022101.50050K562RBM15
SH3GLB2ENSG00000148341.13816.135501327.02660-0.701302.980302.13200K562RPS19
SH3GLB2ENSG00000148341.131855.349602302.67960-0.311605.490004.22670K562SRPK2
SH3GLB2ENSG00000148341.131408.01510952.997900.563003.706602.46050K562SRSF4
SH3GLB2ENSG00000148341.131379.13390929.194200.569603.006201.90320K562SRSF5
SH3GLB2ENSG00000148341.132401.945901997.347000.266003.095001.85220K562SRSF7
SH3GLB2ENSG00000148341.131141.670701671.00990-0.549607.897606.49820K562SYNCRIP
SH3GLB2ENSG00000148341.131354.08180960.148400.495904.310403.25540K562TIA1
SH3GLB2ENSG00000148341.132110.290701388.135300.604203.561502.49470K562TIAL1
SH3GLB2ENSG00000148341.131340.50570942.641100.507903.911802.58000K562TRA2A
SH3GLB2ENSG00000148341.132236.643901475.738100.599802.437101.55910K562TRIM56
SH3GLB2ENSG00000148341.13199.76720511.32320-1.3559011.947509.47610K562U2AF1
SH3GLB2ENSG00000148341.13209.99910528.21810-1.3308016.2195014.24090K562U2AF2
SH3GLB2ENSG00000148341.131660.796702149.03170-0.371806.937005.65180K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SH3GLB2 is not available on ENCORE database.





15 RBPs can affect the splicing of SH3GLB2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESH3GLB2ENSG00000148341.13chr9-131771731131771746131771384131771625131772049131772150-0.074000.002250.02776excludedHepG2U2AF2
SESH3GLB2ENSG00000148341.13chr9-131771384131771625131770728131771070131772049131772150-0.079000.000080.00134excludedK562AQR
SESH3GLB2ENSG00000148341.13chr9-1317780181317781391317770491317771831317833691317834900.069000.000760.05824includedK562SUPV3L1
SESH3GLB2ENSG00000148341.13chr9-131772948131772972131772398131772488131776689131776782-0.051000.003170.04378excludedK562PUS1
SESH3GLB2ENSG00000148341.13chr9-1317780181317781391317770491317771831317833691317834900.061000.001920.08194includedK562EFTUD2
SESH3GLB2ENSG00000148341.13chr9-131772948131772972131772398131772488131774514131774577-0.135000.000000.00002excludedK562HNRNPL
SESH3GLB2ENSG00000148341.13chr9-131772948131772972131772398131772488131774514131774577-0.266000.000010.00075excludedK562TARDBP
SESH3GLB2ENSG00000148341.13chr9-1317780181317781431317770491317771831317833691317834980.333000.000120.00310includedK562HNRNPC
SESH3GLB2ENSG00000148341.13chr9-131771384131771625131770728131771070131772049131772150-0.104000.000000.00000excludedK562HNRNPC
A3SSSH3GLB2ENSG00000148341.13chr9-1317729481317730441317729481317729721317745141317745770.205000.000160.02230longerK562EFTUD2
A3SSSH3GLB2ENSG00000148341.13chr9-1317729481317730441317729481317729721317745141317746150.336000.000000.00046longerHepG2KHSRP
A3SSSH3GLB2ENSG00000148341.13chr9-1317729481317730441317729481317729721317745141317745770.249000.000080.01656longerK562SF3B1
A3SSSH3GLB2ENSG00000148341.13chr9-1317729481317730441317729481317729721317745141317746150.220000.000040.02226longerHepG2G3BP1
A3SSSH3GLB2ENSG00000148341.13chr9-1317729481317730441317729481317729721317745141317745770.227000.000000.00002longerK562HNRNPC
A3SSSH3GLB2ENSG00000148341.13chr9-1317729481317730441317729481317729721317745141317745770.241000.000390.03358longerHepG2SF3B4
MXESH3GLB2ENSG00000148341.13chr9-131774514131774577131776689131776782131772398131772488131777049131777183-0.130000.000860.068422includedK562HNRNPL
MXESH3GLB2ENSG00000148341.13chr9-1317745141317745771317766891317767821317729481317729721317770491317771830.276000.000000.000021includedK562SF3B1
MXESH3GLB2ENSG00000148341.13chr9-1317729481317729721317745141317745771317723981317724881317766891317767820.208000.000860.044941includedK562SF3B1
MXESH3GLB2ENSG00000148341.13chr9-1317729481317729721317745141317746151317723981317724881317766891317767820.069000.003450.096241includedK562SAFB
MXESH3GLB2ENSG00000148341.13chr9-131774514131774577131776689131776782131772398131772488131777049131777183-0.159000.000460.027672includedK562SAFB
MXESH3GLB2ENSG00000148341.13chr9-1317745141317745771317766891317767821317729481317729721317770491317771830.244000.000010.000691includedK562HNRNPC
MXESH3GLB2ENSG00000148341.13chr9-1317729481317729721317745141317745771317723981317724881317766891317767820.122000.000560.021151includedK562PPIL4
MXESH3GLB2ENSG00000148341.13chr9-131774514131774577131776689131776782131772398131772488131777049131777183-0.079000.006200.071232includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SH3GLB2 is not avaliable on ENCORE database.