SAP30

General Information

Gene Name       : SAP30
Gene ID             : ENSG00000164105.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SAP30)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SAP30ENSG00000164105.310.3112.4511.38ENCSR000AEF
HepG2SAP30ENSG00000164105.311.7315.3813.55ENCSR985KAT
K562SAP30ENSG00000164105.322.5617.5420.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SAP30 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SAP30 RNA is bound by 9 proteins.  







eCLIP assay for SAP30 is not avaliable on ENCORE database.





9 proteins are bound to SAP30 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4174298594174298657+3'-UTR5.3878410.29472K562TIA1
chr4174298524174298597+3'-UTR4.961153.81167HepG2SUB1
chr4174292256174292412+5'-UTR,CDS5.124835.89429K562PUM1
chr4174292292174292328+5'-UTR4.416744.78571K562UCHL5
chr4174292121174292221+5'-UTR,intron-Proximal6.8152917.31080K562DDX3X
chr4174292138174292245+5'-UTR,intron-Proximal3.902094.69995K562FTO
chr4174292291174292386+5'-UTR,CDS3.187823.21309HepG2GRWD1
chr4174292135174292212+5'-UTR,intron-Proximal4.823978.17272HepG2DDX3X
chr4174292231174292323+5'-UTR4.6676910.52122K562DDX3X
chr4174294643174294665+CDS3.395833.69481K562UCHL5
chr4174292435174292579+CDS4.681636.67223HepG2GRSF1
chr4174292354174292399+CDS4.263474.77795K562DHX30
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SAP30 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SAP30 is not available on ENCORE database.

  • 105 RBPs can affect the levels of SAP30.  








The Knockdown/knockout RNA-Seq assay for SAP30 is not available on ENCORE database.





105 RBPs can affect the gene expression of SAP30 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SAP30ENSG00000164105.3221.62230284.69360-0.361301.834801.32150HepG2ACO1
SAP30ENSG00000164105.3203.37390286.03690-0.492102.842302.06600HepG2AKAP8L
SAP30ENSG00000164105.3151.81690236.33760-0.638502.783601.99710HepG2ASCC1
SAP30ENSG00000164105.3325.05530249.254100.383002.025601.42080HepG2AUH
SAP30ENSG00000164105.3137.92280264.58330-0.939904.338203.16050HepG2BCCIP
SAP30ENSG00000164105.3120.10320229.93230-0.936904.374103.26780HepG2BCLAF1
SAP30ENSG00000164105.3119.86960223.52700-0.899004.878904.11300HepG2BOP1
SAP30ENSG00000164105.3212.59340301.39550-0.503602.278401.57290HepG2CALR
SAP30ENSG00000164105.3274.16880419.88580-0.614903.152102.10720HepG2CCAR1
SAP30ENSG00000164105.3123.83560284.63860-1.2007012.2902011.09070HepG2CKAP4
SAP30ENSG00000164105.3105.53110205.20710-0.959404.971304.07260HepG2CPSF6
SAP30ENSG00000164105.3190.90640297.90130-0.642003.655202.38780HepG2CPSF7
SAP30ENSG00000164105.3252.63080166.500700.601403.340402.22200HepG2YBX3
SAP30ENSG00000164105.375.62090163.47430-1.112205.123903.72130HepG2CSTF2
SAP30ENSG00000164105.3193.71120263.30400-0.442802.574001.76690HepG2DDX19B
SAP30ENSG00000164105.3105.22710205.94970-0.968805.357204.44560HepG2DDX21
SAP30ENSG00000164105.3125.70740201.57150-0.681203.106402.13730HepG2DDX24
SAP30ENSG00000164105.3137.98990210.09030-0.606402.760801.40710HepG2DDX52
SAP30ENSG00000164105.3182.93330272.37640-0.574303.272802.54600HepG2DKC1
SAP30ENSG00000164105.380.28370162.05120-1.013306.007005.10000HepG2DNAJC2
SAP30ENSG00000164105.3101.22480250.64290-1.308108.695907.16710HepG2EEF2
SAP30ENSG00000164105.3114.90140208.92860-0.862604.443003.03290HepG2EFTUD2
SAP30ENSG00000164105.3149.55010225.94080-0.595302.411301.85600HepG2EIF2S1
SAP30ENSG00000164105.3182.20190274.41590-0.590803.095101.85370HepG2EIF2S2
SAP30ENSG00000164105.3109.04020249.66630-1.195107.728806.66260HepG2EIF4A3
SAP30ENSG00000164105.3135.88170243.13250-0.839403.551602.77670HepG2EIF4B
SAP30ENSG00000164105.3187.40100313.37050-0.741704.485903.12630HepG2ESF1
SAP30ENSG00000164105.3130.95340286.17840-1.127909.551408.54410HepG2ETF1
SAP30ENSG00000164105.3175.10850278.20260-0.667903.930002.93450HepG2EWSR1
SAP30ENSG00000164105.3171.51700365.29990-1.090707.511906.30680HepG2FIP1L1
SAP30ENSG00000164105.3113.84400205.56470-0.852502.216001.31550HepG2FTO
SAP30ENSG00000164105.372.21580233.70690-1.6943012.9313011.54700HepG2G3BP1
SAP30ENSG00000164105.3156.79230248.16130-0.662403.072502.13340HepG2G3BP2
SAP30ENSG00000164105.387.58950181.14620-1.048305.061103.84480HepG2GEMIN5
SAP30ENSG00000164105.365.75040232.61060-1.8228013.1224011.82740HepG2GPKOW
SAP30ENSG00000164105.3167.59490271.80510-0.697605.025303.74830HepG2HDGF
SAP30ENSG00000164105.3117.72970241.22250-1.034904.633202.80020HepG2HLTF
SAP30ENSG00000164105.365.95980165.04950-1.323206.469705.54240HepG2HNRNPA1
SAP30ENSG00000164105.3103.44150183.59090-0.827703.476802.70580HepG2HNRNPC
SAP30ENSG00000164105.388.09430221.98530-1.333308.256907.23210HepG2HNRNPLL
SAP30ENSG00000164105.3173.56740252.02460-0.538102.573301.65470HepG2HNRNPM
SAP30ENSG00000164105.3137.20420237.54400-0.791903.954703.16140HepG2IGF2BP2
SAP30ENSG00000164105.3146.62820260.24990-0.827706.402304.88260HepG2KIF1C
SAP30ENSG00000164105.3156.52760443.42640-1.5023014.5478012.67700HepG2LARP4
SAP30ENSG00000164105.3135.34610208.82400-0.625602.587401.41670HepG2LIN28B
SAP30ENSG00000164105.3144.73930252.06610-0.800304.144703.34480HepG2MAGOH
SAP30ENSG00000164105.3166.59480253.46470-0.605402.462101.86420HepG2MATR3
SAP30ENSG00000164105.3105.20830212.92480-1.017103.586002.39260HepG2METAP2
SAP30ENSG00000164105.3157.75580295.62350-0.906106.275205.10270HepG2MSI2
SAP30ENSG00000164105.3132.66300226.41290-0.771202.811001.83590HepG2MTPAP
SAP30ENSG00000164105.3144.30000259.42530-0.846204.477803.68080HepG2NCBP2
SAP30ENSG00000164105.3107.04610238.78320-1.157504.749203.29640HepG2NONO
SAP30ENSG00000164105.3111.81170230.98960-1.046806.132205.06930HepG2PABPC4
SAP30ENSG00000164105.3120.10410180.51710-0.587802.560501.74280HepG2PARN
SAP30ENSG00000164105.3135.65830238.36520-0.813203.786202.57750HepG2PCBP2
SAP30ENSG00000164105.3104.91640168.25370-0.681402.897601.63710HepG2PKM
SAP30ENSG00000164105.3101.03660161.95320-0.680702.920002.12810HepG2PRPF4
SAP30ENSG00000164105.355.32360200.75010-1.8594011.8732010.36590HepG2PRPF8
SAP30ENSG00000164105.3152.36070355.42980-1.2221012.0867010.95950HepG2PUF60
SAP30ENSG00000164105.3160.26650377.27120-1.2351014.8614013.71470HepG2PUM1
SAP30ENSG00000164105.3163.26230377.01630-1.2074013.1008011.70640HepG2PUM2
SAP30ENSG00000164105.3152.92870289.97990-0.923108.166507.20380HepG2PUS1
SAP30ENSG00000164105.3141.35990239.80470-0.762503.864502.67810HepG2RBM27
SAP30ENSG00000164105.376.38380166.30350-1.122505.721204.79000HepG2RPLP0
SAP30ENSG00000164105.3136.34290225.93650-0.728702.989902.00960HepG2RPS10
SAP30ENSG00000164105.357.87490197.98230-1.7744013.3521012.13070HepG2RPS19
SAP30ENSG00000164105.396.46630221.16600-1.197007.254505.99760HepG2RPS2
SAP30ENSG00000164105.387.66620198.59170-1.179705.495004.42260HepG2RRP9
SAP30ENSG00000164105.3121.69180198.68650-0.707302.994202.01400HepG2SERBP1
SAP30ENSG00000164105.3153.71690332.12810-1.111507.168406.04800HepG2SF3A3
SAP30ENSG00000164105.3128.34000219.71720-0.775703.740202.93160HepG2SF3B1
SAP30ENSG00000164105.3152.64080236.39540-0.631101.878201.37490HepG2SF3B4
SAP30ENSG00000164105.3251.62490340.73340-0.437402.981302.25570HepG2SLBP
SAP30ENSG00000164105.3120.93070189.39650-0.647203.233502.54690HepG2SMN1
SAP30ENSG00000164105.3125.65790244.47550-0.960204.125403.16180HepG2SNRNP70
SAP30ENSG00000164105.3124.31200246.77300-0.989203.378902.86980HepG2SRSF1
SAP30ENSG00000164105.3169.09030350.89530-1.0532011.2210010.07430HepG2SRSF5
SAP30ENSG00000164105.3120.54320243.97190-1.017205.415303.74500HepG2STAU1
SAP30ENSG00000164105.3252.02970399.09870-0.663206.217705.35420HepG2SUCLG1
SAP30ENSG00000164105.3156.00610246.64540-0.660803.610402.54520HepG2SUPT6H
SAP30ENSG00000164105.355.93120258.97470-2.2111017.3467015.90480HepG2SUPV3L1
SAP30ENSG00000164105.384.79840216.38730-1.351508.725007.53920HepG2TARDBP
SAP30ENSG00000164105.376.53920173.59670-1.181504.996103.71380HepG2TFIP11
SAP30ENSG00000164105.351.23940177.19880-1.7900013.1360012.18470HepG2TIAL1
SAP30ENSG00000164105.3204.99810347.18550-0.760105.678604.37110HepG2TUFM
SAP30ENSG00000164105.3159.20930312.47530-0.972806.702405.73650HepG2U2AF1
SAP30ENSG00000164105.3151.99480396.71980-1.384102.583701.63160HepG2U2AF2
SAP30ENSG00000164105.3219.68740367.45460-0.742102.696601.87070HepG2UBE2L3
SAP30ENSG00000164105.342.95640153.00120-1.8326010.725509.23880HepG2UCHL5
SAP30ENSG00000164105.3191.92060294.54670-0.618004.193403.36250HepG2UPF1
SAP30ENSG00000164105.3141.76770237.20650-0.742602.392501.46490HepG2UPF2
SAP30ENSG00000164105.3143.66040284.37350-0.985107.948207.01670HepG2UTP3
SAP30ENSG00000164105.3157.38630254.93150-0.695802.710301.99310HepG2XRN2
SAP30ENSG00000164105.3147.35860323.94520-1.1364012.7956011.83660HepG2ZNF622
SAP30ENSG00000164105.31001.92910730.365000.456003.721002.27670K562ABCF1
SAP30ENSG00000164105.3707.53010485.135000.544303.481902.85850K562AGGF1
SAP30ENSG00000164105.3783.86570504.815400.634806.598205.55650K562AKAP8L
SAP30ENSG00000164105.3718.08110502.470000.515003.626202.62820K562BOP1
SAP30ENSG00000164105.31541.879501219.239900.338602.943901.93920K562CELF1
SAP30ENSG00000164105.3771.58860569.196900.438803.481701.83510K562DDX19B
SAP30ENSG00000164105.31358.56790757.999100.8417015.5854014.15450K562DDX47
SAP30ENSG00000164105.3435.97050555.73010-0.350202.511701.82100K562EIF2S2
SAP30ENSG00000164105.3394.64860227.103100.797103.918802.69700K562EIF3A
SAP30ENSG00000164105.3419.84440311.866100.428802.734901.94280K562EIF3G
SAP30ENSG00000164105.3292.87860421.18510-0.524203.350102.45060K562EIF4A3
SAP30ENSG00000164105.3308.26160438.01560-0.506803.678102.99600K562FXR1
SAP30ENSG00000164105.3476.85080355.149900.425001.882001.31160K562G3BP2
SAP30ENSG00000164105.3285.58150387.86800-0.441702.375401.81630K562HNRNPC
SAP30ENSG00000164105.3787.19340574.885800.453304.450503.30930K562HNRNPU
SAP30ENSG00000164105.3789.30920535.698700.559104.401703.32880K562KIF1C
SAP30ENSG00000164105.3748.28380596.139500.327802.040601.33980K562PPIG
SAP30ENSG00000164105.3847.68830500.563700.759908.183207.29770K562PUS1
SAP30ENSG00000164105.3734.35000487.785800.590106.742305.84300K562RBM15
SAP30ENSG00000164105.3601.73800351.410100.775905.753404.57140K562RPS19
SAP30ENSG00000164105.3528.82970352.731100.584102.641501.34600K562RRP9
SAP30ENSG00000164105.3328.04310467.55420-0.511203.513202.72320K562SRSF1
SAP30ENSG00000164105.3799.47950578.608700.466405.729004.55750K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SAP30 is not available on ENCORE database.





8 RBPs can affect the splicing of SAP30 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESAP30ENSG00000164105.3chr4+174295089174295188174294540174294666174298355174298683-0.073000.000060.00194excludedK562SRSF1
SESAP30ENSG00000164105.3chr4+174295089174295188174294540174294666174298355174298683-0.053000.000320.00807excludedK562SF3B4
SESAP30ENSG00000164105.3chr4+174295089174295188174294491174294666174298355174298683-0.066000.000000.00000excludedK562AQR
SESAP30ENSG00000164105.3chr4+174295089174295188174294540174294666174298355174298683-0.063000.000000.00001excludedK562PUS1
SESAP30ENSG00000164105.3chr4+174295089174295188174294540174294666174298355174298683-0.097000.000000.00001excludedK562U2AF2
SESAP30ENSG00000164105.3chr4+174295089174295188174294540174294666174298355174298683-0.051000.001010.04524excludedK562HNRNPK
MXESAP30ENSG00000164105.3chr4+1742945401742946661742950891742951881742920931742926481742983551742986830.146000.000070.014641includedK562LARP4
MXESAP30ENSG00000164105.3chr4+1742945401742946661742950891742951881742920931742926481742983551742986830.117000.005700.070691includedK562U2AF1
MXESAP30ENSG00000164105.3chr4+1742945401742946661742950891742951881742920931742926481742983551742986830.152000.002920.037211includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SAP30 is not avaliable on ENCORE database.