RAB11B

General Information

Gene Name       : RAB11B
Gene ID             : ENSG00000185236.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RAB11B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RAB11BENSG00000185236.113.786.945.36ENCSR000AEF
HepG2RAB11BENSG00000185236.1171.788.4240.10ENCSR985KAT
K562RAB11BENSG00000185236.1130.759.6520.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RAB11B is not avaliable on ENCORE database.



Proteins bound to RNA
  • RAB11B RNA is bound by 23 proteins.  







eCLIP assay for RAB11B is not avaliable on ENCORE database.





23 proteins are bound to RAB11B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1984675528467587+3'-UTR,intron-Distal3.833647.35737HepG2HNRNPC
chr1984670858467099+3'-UTR,CDS3.648365.95764K562YBX3
chr1984674318467512+3'-UTR,CDS,intron-Proximal3.5768812.49470HepG2PRPF8
chr1984647468464788+3'-UTR,CDS,intron-Distal,intron-Proximal3.605244.71371HepG2GRWD1
chr1984689718469145+3'-UTR5.0388425.14100HepG2AKAP1
chr1984692268469287+3'-UTR4.6959316.55699HepG2PCBP2
chr1984684278468508+3'-UTR,CDS4.6698323.95900HepG2UPF1
chr1984684298468487+3'-UTR,CDS3.300279.57120K562PCBP1
chr1984690488469099+3'-UTR3.289125.13191K562AKAP1
chr1984691918469266+3'-UTR3.3716821.05314K562PUM2
chr1984687638468840+3'-UTR4.7452113.05553HepG2UPF1
chr1984687648468827+3'-UTR3.176286.72146HepG2AKAP1
chr1984689828469087+3'-UTR5.0299816.05326K562PCBP1
chr1984675878467607+3'-UTR,intron-Distal4.062963.43813HepG2HNRNPC
chr1984674148467499+3'-UTR,CDS,intron-Proximal3.6186010.21503K562AQR
chr1984688008468808+3'-UTR3.6186211.30069K562YBX3
chr1984684378468510+3'-UTR,CDS4.2678111.25346HepG2AKAP1
chr1984690068469128+3'-UTR3.5716223.39869K562ILF3
chr1984690258469110+3'-UTR3.1447911.94233HepG2DDX59
chr1984690118469135+3'-UTR4.6875637.57409K562UPF1
chr1984691088469122+3'-UTR4.3286014.50027K562PUM2
chr1984689948469085+3'-UTR5.2355519.36125HepG2UPF1
chr1984685488468606+3'-UTR4.8548621.41483HepG2UPF1
chr1984684348468493+3'-UTR,CDS3.456315.38405K562ILF3
chr1984692078469291+3'-UTR4.0407512.09467K562IGF2BP2
chr1984690618469116+3'-UTR5.4876725.82804HepG2PCBP2
chr1984684258468486+3'-UTR,CDS3.507144.25110K562CSTF2T
chr1984685248468562+3'-UTR4.260084.53561HepG2PCBP1
chr1984690388469061+3'-UTR5.9261225.60862HepG2PCBP2
chr1984690158469134+3'-UTR3.378339.36931K562HNRNPK
chr1984689988469037+3'-UTR5.0253221.50257HepG2PCBP2
chr1984675528467605+3'-UTR,intron-Distal4.1996312.40248K562AQR
chr1984685108468594+3'-UTR6.1467916.20334HepG2AKAP1
chr1984686458468763+3'-UTR5.7874945.64029HepG2UPF1
chr1984691228469141+3'-UTR5.8670366.62712K562PUM2
chr1984686368468738+3'-UTR3.6192512.73339HepG2AKAP1
chr1984688398468899+3'-UTR4.192147.72256HepG2AKAP1
chr1984684388468518+3'-UTR,CDS4.3113710.77278HepG2PCBP2
chr1984688088468837+3'-UTR3.374568.58142K562YBX3
chr1984690338469088+3'-UTR3.392598.32850HepG2HNRNPK
chr1984688538468904+3'-UTR4.179748.16501HepG2UPF1
chr1984691418469191+3'-UTR6.1454268.73674K562PUM2
chr1984684338468546+3'-UTR,CDS3.203748.08207K562AKAP1
chr1984675538467599+3'-UTR,intron-Distal3.175279.59462K562PRPF8
chr1984684988468539+3'-UTR5.335465.18845K562PCBP1
chr1984687528468841+3'-UTR4.6402821.20110K562UPF1
chr1984690238469112+3'-UTR3.010267.02914K562IGF2BP2
chr1984685018468593+3'-UTR3.6854313.10996K562UPF1
chr1984686748468752+3'-UTR6.4731819.54617K562UPF1
chr1984691488469174+3'-UTR5.078937.70404K562UPF1
chr1984552488455296+5'-UTR,intron-Distal3.338945.85428K562DDX3X
chr1984552968455341+5'-UTR,CDS,intron-Distal,intron-Proximal3.067514.68144K562DDX3X
chr1984553328455407+5'-UTR,CDS,intron-Distal,intron-Proximal3.455288.16617HepG2PRPF8
chr1984553108455339+5'-UTR,CDS,intron-Distal4.444274.28220HepG2GRWD1
chr1984673738467456+CDS,intron-Proximal3.113289.10317K562ZNF622
chr1984682008468313+CDS,intron-Proximal3.9090215.15306K562AQR
chr1984671138467129+CDS5.6703344.40526K562YBX3
chr1984682588468363+CDS,intron-Proximal3.7459711.72497HepG2AQR
chr1984670998467109+CDS3.764656.19204K562YBX3
chr1984671488467152+CDS4.9994335.11044K562YBX3
chr1984671098467113+CDS5.0832538.17093K562YBX3
chr1984673828467456+CDS,intron-Proximal3.102637.26922HepG2GRWD1
chr1984681378468169+intron-Distal4.804484.77100HepG2BUD13
chr1984678658467945+intron-Distal3.369713.02335HepG2LSM11
chr1984566868456729+intron-Distal3.760603.16310HepG2CSTF2T
chr1984681948468258+intron-Distal,intron-Proximal6.7786715.77786HepG2AQR
chr1984613828461477+intron-Distal4.291024.71107K562CSTF2T
chr1984616918461747+intron-Distal4.135384.43799HepG2CSTF2T
chr1984678568467921+intron-Distal3.038916.57746K562BUD13
chr1984680708468137+intron-Distal3.624098.85328HepG2BUD13
chr1984567298456787+intron-Distal3.221593.69530HepG2CSTF2T
chr1984681778468274+intron-Distal,intron-Proximal3.111475.92897K562BUD13
chr1984560088456113+intron-Distal4.376134.33692K562NONO
chr1984557118455794+intron-Distal4.985035.44892HepG2FAM120A
chr1984553628455430+intron-Distal,intron-Proximal5.044597.84504HepG2CSTF2T
chr1984557268455798+intron-Distal4.445625.16036HepG2CSTF2T
chr1984558838455957+intron-Distal3.866737.11359K562CSTF2T
chr1984555788455669+intron-Distal3.040323.00054HepG2PRPF4
chr1984558298455942+intron-Distal4.188013.84437HepG2PRPF4
chr1984682208468288+intron-Proximal5.8434210.98371K562SF3B4
chr1984682128468279+intron-Proximal4.365197.57443HepG2BUD13
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RAB11B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RAB11B is not available on ENCORE database.

  • 108 RBPs can affect the levels of RAB11B.  








The Knockdown/knockout RNA-Seq assay for RAB11B is not available on ENCORE database.





108 RBPs can affect the gene expression of RAB11B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RAB11BENSG00000185236.71356.102001127.466600.266303.028602.39750HepG2ACO1
RAB11BENSG00000185236.71436.982301132.671100.343202.582101.83860HepG2AKAP8L
RAB11BENSG00000185236.71391.473101180.849400.236702.319401.68180HepG2AUH
RAB11BENSG00000185236.7721.10290394.631800.869602.385301.51650HepG2BCCIP
RAB11BENSG00000185236.71353.759601031.105500.392703.275702.63100HepG2BOP1
RAB11BENSG00000185236.7804.42220453.953900.825303.867102.95660HepG2CNOT7
RAB11BENSG00000185236.7748.40850549.831700.444702.566301.94280HepG2CELF1
RAB11BENSG00000185236.7727.11270591.031100.298802.836502.08640HepG2DAZAP1
RAB11BENSG00000185236.71465.472501042.693800.491009.616608.24090HepG2DDX19B
RAB11BENSG00000185236.71011.02320388.075101.381308.493107.21860HepG2DDX55
RAB11BENSG00000185236.71551.78330891.108600.800202.690302.08140HepG2DDX6
RAB11BENSG00000185236.71282.522601078.651200.249702.333701.70300HepG2DKC1
RAB11BENSG00000185236.7822.31790331.199901.3119013.8194012.34250HepG2DNAJC21
RAB11BENSG00000185236.7694.05580328.362901.0797017.1990015.70280HepG2DNAJC2
RAB11BENSG00000185236.71658.14260855.953900.953903.950303.24990HepG2EIF2S1
RAB11BENSG00000185236.71675.06830945.595700.824802.774902.13460HepG2EIF4A3
RAB11BENSG00000185236.7757.15050558.677400.438503.501502.59380HepG2EIF4G2
RAB11BENSG00000185236.71688.861101355.839500.316802.402801.83510HepG2ETF1
RAB11BENSG00000185236.71533.087401101.637400.476704.693403.61070HepG2EWSR1
RAB11BENSG00000185236.7658.22660384.523900.775403.379801.85890HepG2HNRNPA0
RAB11BENSG00000185236.7738.97720334.373901.144006.914505.96120HepG2HNRNPA1
RAB11BENSG00000185236.7682.64600375.423900.862504.398902.62990HepG2HNRNPAB
RAB11BENSG00000185236.71185.00740724.569300.7096013.9322012.48420HepG2HNRNPF
RAB11BENSG00000185236.7932.62850538.331600.7927017.5099015.95340HepG2HNRNPL
RAB11BENSG00000185236.71539.589801023.965200.588304.518103.73280HepG2HNRNPLL
RAB11BENSG00000185236.7861.65330369.496901.221409.234708.17590HepG2HNRNPU
RAB11BENSG00000185236.71114.60700713.496000.643509.030807.79130HepG2IGF2BP1
RAB11BENSG00000185236.7609.20050377.423900.690606.884505.78150HepG2ILF2
RAB11BENSG00000185236.7742.90970433.217600.778002.734101.55070HepG2KHDRBS1
RAB11BENSG00000185236.71035.91960586.074400.8217012.7264011.14710HepG2NOL12
RAB11BENSG00000185236.7911.20520356.221101.354906.017303.93130HepG2NOLC1
RAB11BENSG00000185236.7936.98640356.706901.393206.546804.83910HepG2NONO
RAB11BENSG00000185236.7553.25260365.702300.597202.916002.04810HepG2PARN
RAB11BENSG00000185236.71085.14900869.921200.318803.458002.79600HepG2PCBP1
RAB11BENSG00000185236.7822.70170329.556601.3197016.2201014.52040HepG2PPIL4
RAB11BENSG00000185236.7902.75090559.507300.690108.613707.63810HepG2PUF60
RAB11BENSG00000185236.71345.11870593.997901.1791033.0610031.47290HepG2PUM1
RAB11BENSG00000185236.7991.49460593.529100.740202.921202.23230HepG2PUM2
RAB11BENSG00000185236.71369.40880958.621300.514406.711605.80070HepG2QKI
RAB11BENSG00000185236.7924.48440429.732501.105105.523704.10920HepG2RBM27
RAB11BENSG00000185236.7746.82150348.966001.097604.029402.74710HepG2RCC2
RAB11BENSG00000185236.71260.25750985.130200.355204.188503.54790HepG2NELFE
RAB11BENSG00000185236.7821.77820396.249301.052205.080604.01690HepG2RPS2
RAB11BENSG00000185236.7811.82870456.475600.830504.059303.08870HepG2RPS3A
RAB11BENSG00000185236.7702.95580404.568500.797002.448101.44020HepG2RPS5
RAB11BENSG00000185236.7668.91950329.036201.023507.364706.38590HepG2SAFB2
RAB11BENSG00000185236.72285.730101478.556700.628405.354304.39880HepG2SF3A3
RAB11BENSG00000185236.71091.36000921.549700.243902.133301.60390HepG2SF3B4
RAB11BENSG00000185236.71128.66180536.595601.0726028.7502026.95990HepG2SLBP
RAB11BENSG00000185236.7661.77520383.682900.786308.681707.64340HepG2SMN1
RAB11BENSG00000185236.7986.78820464.814201.086004.925103.61360HepG2SMNDC1
RAB11BENSG00000185236.7767.977701127.69710-0.554203.157802.32120HepG2SNRNP70
RAB11BENSG00000185236.71569.721601279.902600.294402.867302.35970HepG2SRFBP1
RAB11BENSG00000185236.7650.52510961.93160-0.564307.541206.85040HepG2SRSF1
RAB11BENSG00000185236.71001.34720552.499300.8578018.3860016.97250HepG2SRSF5
RAB11BENSG00000185236.71003.06150711.858400.494606.928205.90730HepG2SRSF7
RAB11BENSG00000185236.7489.76410782.61130-0.6762010.087209.14930HepG2SRSF9
RAB11BENSG00000185236.7639.14430397.301800.685802.565201.51060HepG2STIP1
RAB11BENSG00000185236.71093.19810628.286300.7990019.0443017.64930HepG2SUCLG1
RAB11BENSG00000185236.71076.63620386.213401.4790010.470309.29380HepG2SUPV3L1
RAB11BENSG00000185236.7415.15050864.71400-1.058607.979007.10620HepG2TAF15
RAB11BENSG00000185236.7557.71580258.798701.107604.585203.35030HepG2TFIP11
RAB11BENSG00000185236.7846.19930358.926101.2372012.3847011.45850HepG2TIAL1
RAB11BENSG00000185236.7895.45640362.251801.3055034.0779032.37650HepG2TRIM56
RAB11BENSG00000185236.71131.52580546.706701.049303.034402.11560HepG2TUFM
RAB11BENSG00000185236.71112.80180578.740700.943102.294701.53770HepG2UBE2L3
RAB11BENSG00000185236.7414.18620228.073400.860702.569301.83870HepG2UCHL5
RAB11BENSG00000185236.7854.262601265.96290-0.567509.369808.37400HepG2UTP3
RAB11BENSG00000185236.7743.18070408.901800.861902.471401.44370HepG2XPO5
RAB11BENSG00000185236.7830.08190380.188101.126405.387104.38600HepG2XRN2
RAB11BENSG00000185236.7592.49890836.07630-0.496806.461005.50490HepG2ZC3H8
RAB11BENSG00000185236.71993.381601261.553500.6599016.6489015.38120K562AGGF1
RAB11BENSG00000185236.71852.828501386.354500.418304.531103.19820K562AKAP8
RAB11BENSG00000185236.71960.177701312.727700.578304.434203.60060K562AKAP8L
RAB11BENSG00000185236.71738.617701377.412800.335903.994602.87860K562ATP5C1
RAB11BENSG00000185236.7540.83030401.337400.430302.965301.59830K562BCCIP
RAB11BENSG00000185236.7632.26590387.891800.704806.814005.27980K562BCLAF1
RAB11BENSG00000185236.7956.63390543.363700.815905.316703.74680K562CCAR1
RAB11BENSG00000185236.7521.38130301.663200.789307.253205.26860K562CIRBP
RAB11BENSG00000185236.7443.10780294.273900.590404.106602.78590K562CSTF2
RAB11BENSG00000185236.71283.365101696.01300-0.402202.964101.95570K562CELF1
RAB11BENSG00000185236.7852.85180661.481500.366502.842601.78590K562DDX3X
RAB11BENSG00000185236.7980.329501242.45170-0.341903.591402.86120K562DDX47
RAB11BENSG00000185236.7950.97900670.644600.503805.992703.83070K562DDX6
RAB11BENSG00000185236.7503.13620340.578800.562903.036202.07830K562EFTUD2
RAB11BENSG00000185236.71125.41290695.431100.6944011.6480010.32350K562EIF2S2
RAB11BENSG00000185236.7660.47640416.201800.666103.668101.44550K562EIF3H
RAB11BENSG00000185236.7801.97330622.329400.365803.151701.90070K562EIF4B
RAB11BENSG00000185236.7808.60470603.222300.422602.788601.49440K562EWSR1
RAB11BENSG00000185236.71021.25980702.311900.540105.140503.96060K562FIP1L1
RAB11BENSG00000185236.7513.44460693.10340-0.432902.964502.07780K562FMR1
RAB11BENSG00000185236.7525.98570718.67960-0.450304.310603.57930K562FXR1
RAB11BENSG00000185236.753.06830145.68340-1.456905.905004.78570K562G3BP2
RAB11BENSG00000185236.7790.09750281.570701.488403.496302.29170K562IGF2BP2
RAB11BENSG00000185236.7503.02070286.351700.812708.105905.93890K562IGF2BP3
RAB11BENSG00000185236.7393.44550555.34100-0.497202.453601.58000K562KRR1
RAB11BENSG00000185236.7443.88280295.811300.585404.421103.35230K562MAGOH
RAB11BENSG00000185236.71724.916701333.557900.371103.644802.35390K562MAK16
RAB11BENSG00000185236.72005.853801560.577100.362004.289603.11400K562MBNL1
RAB11BENSG00000185236.7539.39250335.994600.682804.300002.58800K562NONO
RAB11BENSG00000185236.71414.09530954.935800.566302.334501.44050K562PABPN1
RAB11BENSG00000185236.7427.06690289.205900.562304.056002.40630K562PCBP1
RAB11BENSG00000185236.71131.04250797.257500.504404.344603.28530K562PPIG
RAB11BENSG00000185236.7498.66300287.407300.794908.226507.12320K562PTBP1
RAB11BENSG00000185236.71091.758801504.43870-0.462602.281001.54070K562PUF60
RAB11BENSG00000185236.71126.622601600.69560-0.506704.694503.27090K562PUM1
RAB11BENSG00000185236.72109.674201301.693500.696509.499408.54250K562PUS1
RAB11BENSG00000185236.7945.54320579.821600.705403.676701.43510K562RBFOX2
RAB11BENSG00000185236.71932.381101268.446900.607206.352205.47930K562RBM15
RAB11BENSG00000185236.7389.51970275.530100.499403.010302.12940K562RBM22
RAB11BENSG00000185236.71056.371601376.82540-0.382202.913802.07960K562SF3A3
RAB11BENSG00000185236.7550.10950281.767200.965104.577303.67180K562SRSF1
RAB11BENSG00000185236.7715.96330400.594500.837609.198607.13810K562SRSF4
RAB11BENSG00000185236.7587.65850266.138001.142709.051307.05100K562SRSF5
RAB11BENSG00000185236.7663.27910921.48330-0.474303.797502.18450K562SSRP1
RAB11BENSG00000185236.771.19260142.99040-1.006102.868301.37370K562TAF15
RAB11BENSG00000185236.7671.71620285.140601.2361017.1116015.05230K562TARDBP
RAB11BENSG00000185236.7664.24870275.057201.271908.659407.09930K562TIA1
RAB11BENSG00000185236.7620.73590269.974901.201104.119402.74370K562TRA2A
RAB11BENSG00000185236.71729.598601433.498500.270803.450802.02480K562TROVE2
RAB11BENSG00000185236.7507.58330339.503000.580103.119202.03300K562UCHL5
RAB11BENSG00000185236.7891.699101316.51620-0.562103.727902.75550K562WDR43
RAB11BENSG00000185236.7569.99020345.882000.720603.405602.01880K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RAB11B is not available on ENCORE database.






No RBPs affect the alternative splcing events of RAB11B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RAB11B is not avaliable on ENCORE database.