PRTG

General Information

Gene Name       : PRTG
Gene ID             : ENSG00000166450.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PRTG)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PRTGENSG00000166450.120.020.000.01ENCSR000AEF
HepG2PRTGENSG00000166450.127.9513.7510.85ENCSR985KAT
K562PRTGENSG00000166450.120.020.050.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PRTG is not avaliable on ENCORE database.



Proteins bound to RNA
  • PRTG RNA is bound by 18 proteins.  







eCLIP assay for PRTG is not avaliable on ENCORE database.





18 proteins are bound to PRTG RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr155590415555904203-3'-UTR,intron-Distal4.023173.20552HepG2KHSRP
chr155590654655906620-3'-UTR,intron-Distal3.524744.47204HepG2IGF2BP1
chr155590762555907669-3'-UTR,intron-Distal3.974857.63804HepG2FUBP3
chr155590433255904372-3'-UTR,intron-Distal3.024053.07984HepG2FUBP3
chr155590649755906547-3'-UTR,intron-Distal3.720403.45687HepG2IGF2BP3
chr155590412455904162-3'-UTR,intron-Distal7.0292367.18655HepG2LIN28B
chr155590723155907280-3'-UTR,intron-Distal3.869223.52163HepG2IGF2BP1
chr155590960755909683-3'-UTR,intron-Distal4.008313.16986HepG2QKI
chr155591128755911392-3'-UTR,intron-Distal3.013104.40253HepG2UPF1
chr155591185255911940-3'-UTR,intron-Distal4.7639325.85577HepG2FUBP3
chr155590649255906546-3'-UTR,intron-Distal4.620796.13324HepG2IGF2BP1
chr155590384855903920-3'-UTR,intron-Distal3.8839815.54881HepG2FUBP3
chr155590385655903924-3'-UTR,intron-Distal4.046469.56240HepG2TIAL1
chr155590766955907726-3'-UTR,intron-Distal3.2207810.86464HepG2FUBP3
chr155590407455904164-3'-UTR,intron-Distal7.1995733.69486HepG2FUBP3
chr155590655755906619-3'-UTR,intron-Distal3.928493.73561HepG2IGF2BP3
chr155590401455904057-3'-UTR,intron-Distal4.476818.59497HepG2LIN28B
chr155590416455904225-3'-UTR,intron-Distal5.7325610.89926HepG2FUBP3
chr155591164155911684-3'-UTR,intron-Distal3.790305.01462HepG2FUBP3
chr155590834655908451-3'-UTR,intron-Distal3.761745.19413HepG2LIN28B
chr155603064356030710-3'-UTR,CDS,intron-Distal3.185133.05068HepG2U2AF2
chr155603513056035274-5'-UTR,intron-Distal,intron-Proximal4.3553441.30178HepG2DDX3X
chr155591925055919322-CDS,intron-Distal3.337623.27569HepG2BCLAF1
chr155597598455976130-CDS,intron-Distal,intron-Proximal3.149096.50801HepG2BCLAF1
chr155591286955912898-CDS,intron-Distal3.673844.17155HepG2BCLAF1
chr155591923655919327-CDS,intron-Distal,intron-Proximal3.906964.20699HepG2YBX3
chr155596463655964691-CDS,intron-Distal,intron-Proximal3.512874.09885HepG2BCLAF1
chr155591231855912465-CDS,intron-Distal4.6354312.88094HepG2BCLAF1
chr155597012455970169-CDS,intron-Distal,intron-Proximal3.853644.08943HepG2LIN28B
chr155591285755912869-CDS,intron-Distal,intron-Proximal4.630114.37348HepG2BCLAF1
chr155596783355967882-CDS,intron-Distal,intron-Proximal4.530344.34038HepG2BCLAF1
chr155597016355970239-CDS,intron-Distal,intron-Proximal3.464123.94979HepG2BCLAF1
chr155596571655965880-CDS,intron-Distal,intron-Proximal3.012874.43324HepG2BCLAF1
chr155597146255971642-CDS,intron-Distal,intron-Proximal3.281396.91034HepG2BCLAF1
chr155591653755916627-CDS,intron-Distal,intron-Proximal3.783793.12746HepG2GRWD1
chr155603102156031166-intron-Distal7.3852828.03867HepG2PCBP2
chr155603090156031019-intron-Distal7.3982338.71528HepG2PCBP2
chr155603091856031030-intron-Distal3.082015.65555HepG2PTBP1
chr155601485956014937-intron-Distal3.516544.08528HepG2SUGP2
chr155592159655921665-intron-Distal4.503725.04227HepG2HNRNPL
chr155601507756015129-intron-Distal3.767793.29248HepG2SUGP2
chr155603102456031136-intron-Distal4.045743.89149HepG2HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PRTG is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PRTG is not available on ENCORE database.

  • 115 RBPs can affect the levels of PRTG.  








The Knockdown/knockout RNA-Seq assay for PRTG is not available on ENCORE database.





115 RBPs can affect the gene expression of PRTG :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PRTGENSG00000166450.82064.595601417.249700.542706.654505.06890HepG2AATF
PRTGENSG00000166450.81615.126002480.08700-0.618706.088804.75200HepG2ABCF1
PRTGENSG00000166450.81463.500401805.08460-0.302604.347003.61780HepG2ACO1
PRTGENSG00000166450.81365.143201834.72300-0.426503.810302.66200HepG2ADAR
PRTGENSG00000166450.81447.604302451.02190-0.759707.507506.67580HepG2AKAP1
PRTGENSG00000166450.8468.960401556.73360-1.7310014.3576012.12070HepG2BCCIP
PRTGENSG00000166450.8490.999101352.87640-1.4622010.538208.92870HepG2BCLAF1
PRTGENSG00000166450.81825.122902174.85580-0.252901.820601.32590HepG2BOP1
PRTGENSG00000166450.82958.611202272.625000.380504.867703.88120HepG2CALR
PRTGENSG00000166450.8656.428101700.88940-1.3736014.9617013.25070HepG2CNOT7
PRTGENSG00000166450.81151.106501996.64960-0.7946011.6388010.33620HepG2CPSF6
PRTGENSG00000166450.81521.863602043.05750-0.424904.269202.91130HepG2CPSF7
PRTGENSG00000166450.8459.12530961.86480-1.066907.074505.47160HepG2CSTF2
PRTGENSG00000166450.81156.524402070.57630-0.8402023.6652022.16710HepG2CELF1
PRTGENSG00000166450.82730.039902226.727700.293904.574103.65730HepG2DAZAP1
PRTGENSG00000166450.8484.859001563.96460-1.6896046.6183044.34290HepG2DDX21
PRTGENSG00000166450.82421.014701530.204100.6618011.497709.68040HepG2DDX24
PRTGENSG00000166450.8913.175601432.29250-0.649403.080401.72690HepG2DDX27
PRTGENSG00000166450.83692.104002348.032400.652908.067807.04890HepG2DDX3X
PRTGENSG00000166450.81427.574302059.96620-0.529106.220304.32610HepG2DDX47
PRTGENSG00000166450.81028.240501530.49000-0.573802.711601.94380HepG2DDX55
PRTGENSG00000166450.83410.276902267.337800.588802.209801.34010HepG2DDX59
PRTGENSG00000166450.81311.398202032.67250-0.632307.986706.36110HepG2DDX5
PRTGENSG00000166450.81339.947202016.68140-0.589805.289004.46060HepG2DDX6
PRTGENSG00000166450.81223.486001781.88970-0.542406.562405.10320HepG2DHX30
PRTGENSG00000166450.81004.129801726.97960-0.7823019.7292018.30360HepG2DKC1
PRTGENSG00000166450.81233.120601847.47560-0.5832010.957709.63430HepG2DNAJC21
PRTGENSG00000166450.81150.881401831.16550-0.6700019.7520018.16150HepG2DNAJC2
PRTGENSG00000166450.81213.923801793.41730-0.563005.706104.42020HepG2EEF2
PRTGENSG00000166450.81002.865901495.21170-0.576205.109203.60050HepG2EFTUD2
PRTGENSG00000166450.81909.999601439.966600.407402.584501.51910HepG2AGO1
PRTGENSG00000166450.8589.339201939.00930-1.7181027.3294025.60380HepG2EIF2S1
PRTGENSG00000166450.8911.227801881.84320-1.0463019.5179016.90210HepG2EIF2S2
PRTGENSG00000166450.81133.058601476.74150-0.382203.880902.62800HepG2EIF3G
PRTGENSG00000166450.8728.672902142.99020-1.5563022.7486020.95490HepG2EIF4A3
PRTGENSG00000166450.81230.827102086.20210-0.761306.787405.74130HepG2EIF4B
PRTGENSG00000166450.82125.718703237.04350-0.6067016.4561015.18910HepG2ETF1
PRTGENSG00000166450.8950.999701763.89990-0.8913017.2292015.28360HepG2EWSR1
PRTGENSG00000166450.8828.637901112.67030-0.425203.769302.86030HepG2FUBP3
PRTGENSG00000166450.81138.373202161.71230-0.9252013.1067011.71650HepG2FXR1
PRTGENSG00000166450.81058.274302128.82730-1.0083014.6934012.67090HepG2G3BP2
PRTGENSG00000166450.8984.923801672.20320-0.763708.763606.93610HepG2GNB2L1
PRTGENSG00000166450.81667.198702263.39490-0.441103.558502.84090HepG2GPKOW
PRTGENSG00000166450.81021.129701552.19180-0.604105.098502.62380HepG2GRWD1
PRTGENSG00000166450.8678.148701865.17500-1.4596038.9302037.06370HepG2HNRNPA1
PRTGENSG00000166450.8951.969601403.79000-0.560304.196202.46160HepG2HNRNPAB
PRTGENSG00000166450.8641.497202074.66360-1.6934050.0160047.55130HepG2HNRNPC
PRTGENSG00000166450.81596.922701839.67570-0.204202.032501.41090HepG2HNRNPF
PRTGENSG00000166450.81676.602602028.48460-0.274903.722302.94830HepG2HNRNPL
PRTGENSG00000166450.81782.029802159.99610-0.277501.864001.33760HepG2HNRNPLL
PRTGENSG00000166450.81005.336501728.31680-0.7817011.8027010.07870HepG2HNRNPM
PRTGENSG00000166450.81800.048602060.94700-0.195302.105101.56840HepG2HNRNPU
PRTGENSG00000166450.81384.586001811.55640-0.387804.511303.60650HepG2IGF2BP1
PRTGENSG00000166450.81501.460302038.69170-0.441302.938502.24630HepG2IGF2BP2
PRTGENSG00000166450.81403.437102105.18900-0.5850016.8984015.26650HepG2ILF2
PRTGENSG00000166450.81963.387303428.17360-0.804108.698507.21810HepG2LARP4
PRTGENSG00000166450.81048.782701638.02310-0.643208.038406.19690HepG2LARP7
PRTGENSG00000166450.81198.281101720.25050-0.521705.296003.61300HepG2LIN28B
PRTGENSG00000166450.81144.637101643.57760-0.521904.523602.38640HepG2LSM11
PRTGENSG00000166450.81079.936502162.46490-1.0017015.2401013.75640HepG2MAGOH
PRTGENSG00000166450.82893.117402225.933100.378102.969302.31480HepG2NCBP2
PRTGENSG00000166450.81049.513602130.84360-1.021705.190603.23210HepG2NKRF
PRTGENSG00000166450.81142.842702207.99990-0.9501026.0702023.92180HepG2NOL12
PRTGENSG00000166450.82401.467201915.222800.326301.937901.30640HepG2NSUN2
PRTGENSG00000166450.81204.905401664.21430-0.465903.654401.35990HepG2NUSAP1
PRTGENSG00000166450.8580.031801554.35860-1.4221014.8794012.78260HepG2PABPC1
PRTGENSG00000166450.81509.673501982.62710-0.393202.975102.22870HepG2PABPC4
PRTGENSG00000166450.82108.714801814.474000.216702.369301.79850HepG2PCBP1
PRTGENSG00000166450.8944.167302076.11380-1.136806.610605.06080HepG2PCBP2
PRTGENSG00000166450.8969.137201716.61700-0.8248011.606808.47060HepG2PES1
PRTGENSG00000166450.8746.468501525.14300-1.030809.107806.51950HepG2PNPT1
PRTGENSG00000166450.81478.973301838.19990-0.313703.650602.81640HepG2PPIL4
PRTGENSG00000166450.8764.869301181.20440-0.627002.736201.93180HepG2PRPF8
PRTGENSG00000166450.81522.071401846.29800-0.278603.413002.81890HepG2PTBP1
PRTGENSG00000166450.81106.598802107.63200-0.9295011.3402010.24440HepG2PUF60
PRTGENSG00000166450.82015.160802237.23070-0.150802.058401.53180HepG2PUM1
PRTGENSG00000166450.8971.193201838.59730-0.9208031.4228029.76910HepG2PUS1
PRTGENSG00000166450.81551.760301999.58020-0.365804.462403.69550HepG2QKI
PRTGENSG00000166450.8647.924502003.93730-1.6289010.115908.83120HepG2RAVER1
PRTGENSG00000166450.84712.339002705.554300.8004025.8629024.60280HepG2RBM22
PRTGENSG00000166450.82263.296401814.749900.318603.063102.35770HepG2RBM25
PRTGENSG00000166450.81226.415201603.90300-0.387102.517601.50700HepG2RCC2
PRTGENSG00000166450.82635.113101913.724700.461409.519408.47770HepG2RECQL
PRTGENSG00000166450.81054.347901981.76690-0.910409.048807.92390HepG2RPLP0
PRTGENSG00000166450.81028.235001416.61660-0.462304.816904.03110HepG2RPS19
PRTGENSG00000166450.81177.779201821.68400-0.629207.032305.79510HepG2RPS2
PRTGENSG00000166450.81214.224101859.46380-0.614906.548904.90290HepG2RPS5
PRTGENSG00000166450.8971.956302137.99080-1.1373023.8837022.05140HepG2SF3B1
PRTGENSG00000166450.81290.769901922.22940-0.5745012.1436011.04270HepG2SF3B4
PRTGENSG00000166450.81642.437002140.34300-0.382008.328507.30770HepG2SMN1
PRTGENSG00000166450.8850.611102040.89980-1.262609.703007.83640HepG2SMNDC1
PRTGENSG00000166450.83323.946002378.882000.482503.000302.18500HepG2SNRNP70
PRTGENSG00000166450.81451.997902006.39340-0.466608.888008.14820HepG2SRSF1
PRTGENSG00000166450.81413.628401807.41720-0.354504.985804.09290HepG2SRSF7
PRTGENSG00000166450.81570.076102653.10920-0.7568025.0997023.90010HepG2SSB
PRTGENSG00000166450.8483.827601484.78290-1.6177027.0936023.73250HepG2STIP1
PRTGENSG00000166450.82766.837602366.608800.225302.833502.20600HepG2SUCLG1
PRTGENSG00000166450.81166.248901691.61290-0.536505.658404.33640HepG2SUPT6H
PRTGENSG00000166450.84425.975401803.430501.2952060.8600058.65680HepG2TAF15
PRTGENSG00000166450.82741.528502105.229300.380903.675802.85610HepG2TARDBP
PRTGENSG00000166450.8670.904102002.59040-1.5777056.2513054.54000HepG2TIAL1
PRTGENSG00000166450.8468.872302020.49720-2.10740124.66460121.57080HepG2TRIM56
PRTGENSG00000166450.81668.639102058.88140-0.303203.041102.12030HepG2TUFM
PRTGENSG00000166450.83084.194802142.708800.525406.483205.53840HepG2U2AF1
PRTGENSG00000166450.8440.82260900.23020-1.030107.043705.82410HepG2UCHL5
PRTGENSG00000166450.8572.389601395.70360-1.285907.716905.98740HepG2UPF2
PRTGENSG00000166450.82708.271502198.084700.301004.807604.05420HepG2UTP3
PRTGENSG00000166450.81152.940001529.07290-0.407302.339101.33860HepG2XPO5
PRTGENSG00000166450.82955.074701969.811200.585004.240202.66960HepG2XRCC5
PRTGENSG00000166450.8595.684801499.95030-1.3323010.120208.75240HepG2XRN2
PRTGENSG00000166450.81414.697201909.42150-0.432604.227103.42430HepG2ZC3H8
PRTGENSG00000166450.8911.460202503.95760-1.4580094.5216092.55420HepG2ZNF622
PRTGENSG00000166450.83148.372602001.321500.653605.659303.72660HepG2ZRANB2
PRTGENSG00000166450.825.118606.064602.050202.224801.54350K562GRSF1
PRTGENSG00000166450.834.7877010.305201.755102.620601.81370K562PCBP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PRTG is not available on ENCORE database.





2 RBPs can affect the splicing of PRTG :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPRTGENSG00000166450.8chr15-560325795603288255975984559761295603503556035177-0.198000.001200.03536excludedHepG2SF3A3
A3SSPRTGENSG00000166450.8chr15-559655685596587455965568559657965596771655967867-0.486000.000000.00002shorterHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PRTG is not avaliable on ENCORE database.