NELFA

General Information

Gene Name : NELFA
Gene ID : ENSG00000185049.14
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NELFA)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NELFA	ENSG00000185049.14	1.65	4.43	3.04	ENCSR000AEF
HepG2	NELFA	ENSG00000185049.14	26.73	8.18	17.45	ENCSR985KAT
K562	NELFA	ENSG00000185049.14	23.20	9.97	16.59	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NELFA is not avaliable on ENCORE database.

Proteins bound to RNA

NELFA RNA is bound by 32 proteins.

CanvasJS.com

eCLIP assay for NELFA is not avaliable on ENCORE database.

32 proteins are bound to NELFA RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	2002004	2002050	-	intron-Distal	6.21641	54.69126	K562	EXOSC5
chr4	2001933	2001993	-	intron-Distal	5.13140	42.07501	K562	EXOSC5
chr4	2002050	2002066	-	intron-Distal	5.88795	41.00518	K562	EXOSC5
chr4	2001110	2001197	-	intron-Distal	7.15586	38.55603	K562	EXOSC5
chr4	2010062	2010212	-	intron-Distal	5.30534	31.83745	HepG2	DDX59
chr4	2000835	2000880	-	intron-Distal	5.87309	28.35059	K562	EXOSC5
chr4	1999769	1999870	-	intron-Distal	4.30260	23.01443	K562	EXOSC5
chr4	2001908	2001999	-	intron-Distal	5.64410	22.01031	K562	MATR3
chr4	2010068	2010200	-	intron-Distal	5.44383	21.06732	K562	HNRNPK
chr4	1999822	1999882	-	intron-Distal	4.42231	20.45311	K562	HNRNPM
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 166 entries

eCLIP assay for NELFA is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NELFA is not available on ENCORE database.
104 RBPs can affect the levels of NELFA.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NELFA is not available on ENCORE database.

104 RBPs can affect the gene expression of NELFA :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NELFA	ENSG00000185049.8	2629.18970	1246.08540	1.07710	45.59820	43.33630	K562	AGGF1
NELFA	ENSG00000185049.8	869.43000	423.31110	1.03830	16.43850	14.72370	K562	SRSF1
NELFA	ENSG00000185049.8	180.18600	429.82470	-1.25430	15.77090	14.59450	HepG2	TAF15
NELFA	ENSG00000185049.8	2350.12190	1252.89380	0.90740	15.20010	13.79340	K562	RBM15
NELFA	ENSG00000185049.8	879.69830	424.59820	1.05080	15.34220	12.72010	K562	SRSF4
NELFA	ENSG00000185049.8	350.28880	155.52550	1.17130	13.15050	11.61330	HepG2	PPIL4
NELFA	ENSG00000185049.8	847.09520	444.39060	0.93060	13.45240	11.47520	K562	MAGOH
NELFA	ENSG00000185049.8	839.61530	399.85870	1.07010	13.27490	10.82100	K562	SRSF5
NELFA	ENSG00000185049.8	580.61470	337.40400	0.78300	10.85220	9.84030	HepG2	PUM1
NELFA	ENSG00000185049.8	341.58670	170.95660	0.99850	10.52440	9.52950	HepG2	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 117 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NELFA is not available on ENCORE database.

3 RBPs can affect the splicing of NELFA :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	NELFA	ENSG00000185049.8	chr4	-	1986534	1986753	1986534	1986646	1987502	1987591	0.16200	0.00000	0.00000	longer	K562	AQR
SE	NELFA	ENSG00000185049.8	chr4	-	2008724	2008926	1993314	1993442	2010476	2010575	0.08000	0.00154	0.02740	included	K562	HNRNPC
SE	NELFA	ENSG00000185049.8	chr4	-	1993270	1993442	1991434	1991596	2010476	2010702	-0.05200	0.00677	0.07806	excluded	K562	PUS1

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NELFA

General Information

Functions

Localization

Domains (AlphaFold: NELFA)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NELFA is not avaliable on ENCORE database.

32 proteins are bound to NELFA RNA:

eCLIP assay for NELFA is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NELFA is not available on ENCORE database.

104 RBPs can affect the gene expression of NELFA :

The Knockdown/knockout RNA-Seq assay for NELFA is not available on ENCORE database.

3 RBPs can affect the splicing of NELFA :

The Knockdown/knockout RNA-Seq assay for NELFA is not avaliable on ENCORE database.