MAN2C1

General Information

Gene Name : MAN2C1
Gene ID : ENSG00000140400.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MAN2C1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MAN2C1	ENSG00000140400.16	11.08	21.80	16.44	ENCSR000AEF
HepG2	MAN2C1	ENSG00000140400.16	75.37	42.48	58.92	ENCSR985KAT
K562	MAN2C1	ENSG00000140400.16	40.54	25.80	33.17	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MAN2C1 is not avaliable on ENCORE database.

Proteins bound to RNA

MAN2C1 RNA is bound by 28 proteins.

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eCLIP assay for MAN2C1 is not avaliable on ENCORE database.

28 proteins are bound to MAN2C1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	75651645	75651659	-	intron-Distal,intron-Proximal	5.62430	47.10161	HepG2	RBFOX2
chr15	75650973	75651064	-	CDS,intron-Distal,intron-Proximal	5.18272	41.50902	HepG2	RBFOX2
chr15	75651611	75651645	-	intron-Distal,intron-Proximal	5.41568	40.32189	HepG2	RBFOX2
chr15	75651833	75651931	-	intron-Distal,intron-Proximal	5.08241	38.01686	K562	DDX24
chr15	75650492	75650570	-	CDS,intron-Distal,intron-Proximal	4.36420	34.04754	HepG2	PRPF8
chr15	75651485	75651547	-	CDS,intron-Distal,intron-Proximal	5.09805	31.93293	K562	DDX24
chr15	75656828	75656954	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.01824	31.67840	K562	DDX24
chr15	75651467	75651578	-	CDS,intron-Distal,intron-Proximal	4.89995	29.72508	K562	RBFOX2
chr15	75651494	75651552	-	CDS,intron-Distal,intron-Proximal	4.92856	29.50986	HepG2	RBFOX2
chr15	75650674	75650764	-	CDS,intron-Distal,intron-Proximal	4.34547	27.45002	K562	SF3B4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 214 entries

eCLIP assay for MAN2C1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MAN2C1 is not available on ENCORE database.
96 RBPs can affect the levels of MAN2C1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MAN2C1 is not available on ENCORE database.

96 RBPs can affect the gene expression of MAN2C1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MAN2C1	ENSG00000140400.10	1537.80460	779.11070	0.98090	29.63010	27.82670	HepG2	HNRNPU
MAN2C1	ENSG00000140400.10	2726.28680	1112.20840	1.29340	26.65410	24.71180	HepG2	HNRNPK
MAN2C1	ENSG00000140400.10	1310.72160	693.82370	0.91760	25.55210	23.86430	HepG2	SAFB2
MAN2C1	ENSG00000140400.10	135.23460	557.06040	-2.04240	24.47180	21.67940	K562	G3BP2
MAN2C1	ENSG00000140400.10	2477.49580	1097.30490	1.17480	20.32260	18.60140	HepG2	G3BP1
MAN2C1	ENSG00000140400.10	2609.89430	1161.45160	1.16800	19.29600	17.95970	HepG2	SF3B4
MAN2C1	ENSG00000140400.10	1775.70940	3437.03340	-0.95280	19.63180	17.38460	K562	PUF60
MAN2C1	ENSG00000140400.10	1651.75790	868.49530	0.92730	16.69020	14.84220	HepG2	FUBP3
MAN2C1	ENSG00000140400.10	2010.13750	1339.18180	0.58580	16.18170	14.66880	HepG2	HNRNPL
MAN2C1	ENSG00000140400.10	1926.26190	1096.57460	0.81270	15.63970	14.10510	HepG2	RBM25
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 113 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MAN2C1 is not available on ENCORE database.

31 RBPs can affect the splicing of MAN2C1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MAN2C1	ENSG00000140400.10	chr15	-	75657941	75658039	75656828	75657006	75658862	75658933	0.12200	0.00000	0.00026	included	HepG2	HNRNPC
SE	MAN2C1	ENSG00000140400.10	chr15	-	75657941	75658039	75656828	75657006	75658862	75658933	0.28200	0.00000	0.00000	included	K562	HNRNPC
A3SS	MAN2C1	ENSG00000140400.10	chr15	-	75651668	75651779	75651668	75651766	75651960	75652116	0.35200	0.00000	0.00064	longer	HepG2	TAF15
A3SS	MAN2C1	ENSG00000140400.10	chr15	-	75651399	75651532	75651399	75651494	75651668	75651754	0.41400	0.00000	0.00079	longer	HepG2	SF3B4
RI	MAN2C1	ENSG00000140400.10	chr15	-	75653626	75654061	75653626	75653722	75653944	75654061	0.06200	0.00000	0.00006	included	K562	PUS1
RI	MAN2C1	ENSG00000140400.10	chr15	-	75650802	75651149	75650802	75650959	75651044	75651149	0.23400	0.00000	0.00002	included	HepG2	U2AF2
RI	MAN2C1	ENSG00000140400.10	chr15	-	75653626	75654061	75653626	75653722	75653944	75654061	0.07300	0.00000	0.00002	included	K562	AKAP8L
RI	MAN2C1	ENSG00000140400.10	chr15	-	75650802	75651149	75650802	75650959	75651044	75651149	0.16600	0.00000	0.00016	included	HepG2	NCBP2
RI	MAN2C1	ENSG00000140400.10	chr15	-	75651399	75651766	75651399	75651494	75651668	75651766	0.43400	0.00000	0.00000	included	HepG2	FUBP3
A3SS	MAN2C1	ENSG00000140400.10	chr15	-	75648639	75648847	75648639	75648790	75648946	75649026	0.26400	0.00001	0.00557	longer	HepG2	PRPF8

Showing 1 to 10 of 61 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MAN2C1

General Information

Functions

Localization

Domains (AlphaFold: MAN2C1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MAN2C1 is not avaliable on ENCORE database.

28 proteins are bound to MAN2C1 RNA:

eCLIP assay for MAN2C1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MAN2C1 is not available on ENCORE database.

96 RBPs can affect the gene expression of MAN2C1 :

The Knockdown/knockout RNA-Seq assay for MAN2C1 is not available on ENCORE database.

31 RBPs can affect the splicing of MAN2C1 :

The Knockdown/knockout RNA-Seq assay for MAN2C1 is not avaliable on ENCORE database.