LAMC1

General Information

Gene Name       : LAMC1
Gene ID             : ENSG00000135862.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LAMC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LAMC1ENSG00000135862.521.1525.2323.19ENCSR000AEF
HepG2LAMC1ENSG00000135862.5153.63125.74139.69ENCSR985KAT
K562LAMC1ENSG00000135862.50.170.050.11ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LAMC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LAMC1 RNA is bound by 27 proteins.  







eCLIP assay for LAMC1 is not avaliable on ENCORE database.





27 proteins are bound to LAMC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1183113414183113482+3'-UTR6.8706321.99591HepG2FUBP3
chr1183111956183111989+3'-UTR3.9502012.40202HepG2GRWD1
chr1183111862183111978+3'-UTR,CDS3.185779.55218HepG2ZNF800
chr1183112157183112218+3'-UTR3.110903.94523HepG2IGF2BP3
chr1183111927183111956+3'-UTR4.0230712.70516HepG2GRWD1
chr1183079622183079662+3'-UTR,CDS,intron-Proximal3.499963.27746HepG2LIN28B
chr1183113062183113141+3'-UTR4.598416.91890HepG2IGF2BP3
chr1183112248183112310+3'-UTR3.478084.24460HepG2IGF2BP1
chr1183113646183113696+3'-UTR3.743857.63056HepG2DDX55
chr1183113646183113703+3'-UTR3.222843.52299HepG2AKAP1
chr1183111926183111997+3'-UTR3.978084.24460HepG2IGF2BP1
chr1183112220183112332+3'-UTR3.679745.64093HepG2UPF1
chr1183112975183113074+3'-UTR3.014053.38426HepG2UPF1
chr1183112797183112895+3'-UTR3.586247.60345HepG2UPF1
chr1183113085183113139+3'-UTR4.776766.60946HepG2IGF2BP1
chr1183111910183111927+3'-UTR,CDS3.472047.87063HepG2GRWD1
chr1183112246183112302+3'-UTR3.908653.97134HepG2IGF2BP3
chr1183113522183113625+3'-UTR3.3585211.13203HepG2DDX55
chr1183112439183112537+3'-UTR4.568975.14974HepG2UPF1
chr1183114554183114641+3'-UTR4.541104.46521HepG2TIA1
chr1183114552183114649+3'-UTR3.182804.46482HepG2FUBP3
chr1183111916183111992+3'-UTR,CDS3.304774.28120HepG2AGGF1
chr1183112007183112056+3'-UTR5.058348.44576HepG2IGF2BP3
chr1183112168183112219+3'-UTR3.330223.77798HepG2IGF2BP1
chr1183111928183111996+3'-UTR3.418214.78028HepG2IGF2BP3
chr1183113528183113632+3'-UTR3.3297622.33682HepG2PCBP2
chr1183114323183114361+3'-UTR4.771154.87318HepG2TIA1
chr1182992754182992810+5'-UTR3.7367329.55873HepG2DDX3X
chr1183072689183072766+5'-UTR,CDS3.8031411.75419HepG2SND1
chr1182992609182992677+5'-UTR4.1285456.81656HepG2DDX3X
chr1182992614182992664+5'-UTR3.5071313.81477HepG2RPS3
chr1182992690182992744+5'-UTR4.2148215.23109HepG2RPS3
chr1183072530183072570+5'-UTR,CDS3.885038.34613HepG2SND1
chr1182992677182992754+5'-UTR3.8290767.85362HepG2DDX3X
chr1182992787182992897+5'-UTR,CDS4.5856134.96908HepG2RPS3
chr1182992810182992891+5'-UTR,CDS3.2197439.19203HepG2DDX3X
chr1183106871183106917+CDS3.6327111.42460HepG2GRWD1
chr1183105521183105532+CDS3.988888.76261HepG2GRWD1
chr1183090931183090999+CDS4.114378.02705HepG2LIN28B
chr1183103883183103907+CDS3.076214.67625HepG2ZNF800
chr1183079736183079788+CDS3.076749.08734HepG2SND1
chr1183091323183091383+CDS3.097437.79539HepG2LIN28B
chr1183106924183106962+CDS5.7603416.30930HepG2GRWD1
chr1183086721183086743+CDS4.460156.63657HepG2SND1
chr1183111667183111693+CDS,intron-Proximal3.865189.32279HepG2LIN28B
chr1182993081182993171+CDS3.026766.86986HepG2SND1
chr1183105570183105623+CDS4.3095427.43414HepG2GRWD1
chr1183109533183109633+CDS,intron-Proximal4.5420024.62094HepG2GRWD1
chr1183101642183101673+CDS,intron-Proximal4.410583.42472HepG2FXR2
chr1183104268183104290+CDS3.777705.10069HepG2GRWD1
chr1183091349183091379+CDS3.297643.34848HepG2PPIG
chr1183102667183102723+CDS,intron-Proximal3.711503.39008HepG2AQR
chr1183111820183111910+CDS3.1719016.38625HepG2GRWD1
chr1183084704183084773+CDS,intron-Proximal4.1872210.65228HepG2SND1
chr1183111740183111830+CDS3.8930417.48844HepG2BCLAF1
chr1183093789183093864+CDS4.416939.16903HepG2LIN28B
chr1182992953182992990+CDS3.370513.60749HepG2NOL12
chr1183111706183111736+CDS3.718374.41784HepG2GRWD1
chr1183111668183111689+CDS,intron-Proximal4.072486.36878HepG2SND1
chr1183083712183083820+CDS3.3837311.15677HepG2LIN28B
chr1183104188183104230+CDS5.0719213.41311HepG2SND1
chr1183105524183105589+CDS3.3649923.08635HepG2BCLAF1
chr1183102540183102615+CDS,intron-Proximal3.743219.74307HepG2ZNF800
chr1183085936183085971+CDS3.860176.92877HepG2SND1
chr1183109532183109634+CDS,intron-Proximal4.148213.75945HepG2UCHL5
chr1183094634183094682+CDS4.237247.91821HepG2GRWD1
chr1183103863183103936+CDS3.8202316.01755HepG2BCLAF1
chr1183097845183097885+CDS3.815855.05467HepG2LIN28B
chr1183099534183099618+CDS3.6868014.17599HepG2BCLAF1
chr1183104176183104188+CDS,intron-Proximal4.320677.20197HepG2SND1
chr1183105592183105662+CDS3.8905820.56470HepG2ZNF800
chr1183083730183083809+CDS4.3940212.11021HepG2SND1
chr1183106859183106933+CDS3.697643.48077HepG2UCHL5
chr1183105623183105669+CDS5.3681031.52279HepG2GRWD1
chr1183100454183100510+CDS3.736277.31650HepG2SND1
chr1183101580183101662+CDS4.0519314.47753HepG2LIN28B
chr1183091269183091309+CDS4.096944.39950HepG2SND1
chr1182992897182992961+CDS4.6506036.08464HepG2RPS3
chr1183105634183105677+CDS3.4882617.16090HepG2BCLAF1
chr1183101643183101671+CDS4.067327.91821HepG2GRWD1
chr1183086743183086764+CDS3.924966.64821HepG2SND1
chr1183102540183102641+CDS,intron-Proximal4.5833018.16212HepG2GRWD1
chr1183109621183109638+CDS3.787978.40461HepG2LIN28B
chr1183091028183091078+CDS5.717448.83160HepG2SND1
chr1183109625183109638+CDS4.009925.56131HepG2SND1
chr1183104230183104248+CDS4.889776.94886HepG2GRWD1
chr1183093802183093876+CDS3.566889.56700HepG2SND1
chr1183105532183105569+CDS3.8964912.71139HepG2GRWD1
chr1183103930183103943+CDS4.997447.17283HepG2GRWD1
chr1183105520183105573+CDS,intron-Proximal3.5444713.51860HepG2ZNF800
chr1183101628183101669+CDS4.196428.19556HepG2BCLAF1
chr1183106939183106960+CDS3.671636.36847HepG2BCLAF1
chr1183099478183099534+CDS,intron-Proximal4.1149212.21730HepG2BCLAF1
chr1182993081182993159+CDS6.4290722.62352HepG2RPS3
chr1183094668183094683+CDS4.945136.13895HepG2SND1
chr1183105573183105592+CDS4.4665812.97353HepG2ZNF800
chr1183104176183104196+CDS,intron-Proximal3.771503.85588HepG2ZNF800
chr1183094605183094650+CDS3.733908.14061HepG2SND1
chr1183085711183085729+CDS,intron-Proximal4.807324.94988HepG2SND1
chr1183104180183104230+CDS4.1627311.60690HepG2GRWD1
chr1183102585183102683+CDS3.8827211.83286HepG2LIN28B
chr1183102584183102632+CDS4.3358214.95005HepG2BCLAF1
chr1182993268182993318+CDS,intron-Proximal3.372966.18341HepG2PRPF8
chr1183091211183091256+CDS3.733294.50521HepG2SND1
chr1183095270183095392+CDS4.7499916.46860HepG2SND1
chr1183105587183105668+CDS4.125667.20974HepG2UCHL5
chr1183086514183086571+CDS4.128658.25941HepG2LIN28B
chr1183100433183100490+CDS,intron-Proximal4.469129.72888HepG2GRWD1
chr1183095257183095329+CDS4.2005614.90136HepG2RPS3
chr1183095254183095270+CDS,intron-Proximal5.050386.73605HepG2SND1
chr1183097826183097881+CDS3.060088.30744HepG2BCLAF1
chr1183105521183105662+CDS3.4026714.47334HepG2FXR2
chr1183104196183104247+CDS3.545246.00958HepG2ZNF800
chr1183111667183111706+CDS,intron-Proximal3.7125310.84205HepG2GRWD1
chr1183103855183103930+CDS3.6006910.30290HepG2GRWD1
chr1183102632183102679+CDS4.4985913.76815HepG2BCLAF1
chr1183102540183102584+CDS,intron-Proximal4.0116916.43154HepG2BCLAF1
chr1183093969183094002+CDS3.609934.76748HepG2SND1
chr1183090877183090970+CDS3.2556812.65598HepG2SND1
chr1183111759183111820+CDS3.8619112.18084HepG2GRWD1
chr1183096480183096527+CDS3.937344.50521HepG2SND1
chr1183086462183086480+CDS4.728455.84094HepG2SND1
chr1182992891182992993+CDS3.2849042.22078HepG2DDX3X
chr1182992961182993006+CDS5.2415513.61031HepG2RPS3
chr1183103933183103944+CDS3.981635.79199HepG2SND1
chr1183099486183099518+CDS3.734376.58996HepG2GRWD1
chr1183102641183102682+CDS5.252468.08487HepG2GRWD1
chr1183006290183006451+intron-Distal5.345878.59719HepG2HNRNPM
chr1183004868183004934+intron-Distal4.030843.27946HepG2HNRNPM
chr1182998400182998459+intron-Distal4.265743.96879HepG2MATR3
chr1183107309183107362+intron-Distal3.442065.01844HepG2U2AF2
chr1183021809183021855+intron-Distal4.591195.14122HepG2PCBP2
chr1183060600183060678+intron-Distal4.043356.53456HepG2PCBP2
chr1182997885182997942+intron-Distal3.909343.09122HepG2PTBP1
chr1183021356183021422+intron-Distal4.407709.09391HepG2PCBP2
chr1183021335183021420+intron-Distal3.319444.30137HepG2PTBP1
chr1183006698183006742+intron-Distal4.442835.20135HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LAMC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LAMC1 is not available on ENCORE database.

  • 104 RBPs can affect the levels of LAMC1.  








The Knockdown/knockout RNA-Seq assay for LAMC1 is not available on ENCORE database.





104 RBPs can affect the gene expression of LAMC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LAMC1ENSG00000135862.58053.175906721.177000.260702.360201.36650HepG2AATF
LAMC1ENSG00000135862.59046.366006686.717700.4359014.2990013.14720HepG2ACO1
LAMC1ENSG00000135862.511423.404707196.401900.6665010.521308.75290HepG2ADAR
LAMC1ENSG00000135862.512995.671909011.508100.528105.225704.52370HepG2AKAP1
LAMC1ENSG00000135862.54187.232906127.08220-0.549206.012504.74540HepG2BCLAF1
LAMC1ENSG00000135862.57584.439306306.943800.266002.738501.51280HepG2BUD13
LAMC1ENSG00000135862.510899.972308503.035500.358205.312204.28630HepG2CALR
LAMC1ENSG00000135862.521909.9132013402.962500.708907.750506.10180HepG2CCAR1
LAMC1ENSG00000135862.58644.729607083.850300.287202.291601.58360HepG2CIRBP
LAMC1ENSG00000135862.58603.472406684.863800.3639011.7793010.60030HepG2CKAP4
LAMC1ENSG00000135862.514784.269408795.524900.7491014.4458013.02330HepG2CPSF6
LAMC1ENSG00000135862.55816.348607379.87440-0.343506.115904.59970HepG2YBX3
LAMC1ENSG00000135862.56223.438104355.505400.514806.756805.18440HepG2CSTF2
LAMC1ENSG00000135862.511429.968309055.561400.335807.015806.08070HepG2CELF1
LAMC1ENSG00000135862.56230.783807390.06350-0.246203.376702.09450HepG2DDX1
LAMC1ENSG00000135862.512455.268707416.528900.7478015.8902014.42330HepG2DDX21
LAMC1ENSG00000135862.56152.799607256.78830-0.238102.454301.59830HepG2DDX24
LAMC1ENSG00000135862.53547.545306486.96190-0.8707011.664709.34400HepG2DDX27
LAMC1ENSG00000135862.53439.690805251.98720-0.610607.583605.46820HepG2DDX28
LAMC1ENSG00000135862.55470.201907282.45000-0.412804.460003.18980HepG2DDX5
LAMC1ENSG00000135862.512676.261507415.955100.7733010.470809.35260HepG2DDX6
LAMC1ENSG00000135862.54941.054006989.13300-0.500307.235505.71760HepG2DHX30
LAMC1ENSG00000135862.55122.260607182.56550-0.4877019.5014017.92090HepG2DNAJC2
LAMC1ENSG00000135862.54815.860205973.25590-0.310702.576201.50230HepG2EFTUD2
LAMC1ENSG00000135862.511864.211507128.209600.7349011.3007010.15010HepG2EIF2S1
LAMC1ENSG00000135862.57756.241805816.516900.415104.240103.13760HepG2EIF3D
LAMC1ENSG00000135862.59235.364207003.143100.399105.921404.42770HepG2EIF3G
LAMC1ENSG00000135862.56100.087109605.99500-0.6551025.0440023.07400HepG2EIF4G1
LAMC1ENSG00000135862.57679.294206533.762200.233002.198801.45470HepG2EWSR1
LAMC1ENSG00000135862.516491.290908499.521100.9562017.1698015.53650HepG2FIP1L1
LAMC1ENSG00000135862.54530.029405770.72360-0.349203.016501.69220HepG2FKBP4
LAMC1ENSG00000135862.57485.290205001.435500.5816010.240908.77690HepG2FUBP3
LAMC1ENSG00000135862.514489.613408613.306500.750307.314405.56480HepG2FUS
LAMC1ENSG00000135862.58401.702305178.866400.6979011.315009.57260HepG2GEMIN5
LAMC1ENSG00000135862.55430.666906901.78010-0.345802.947301.89380HepG2GNB2L1
LAMC1ENSG00000135862.514230.910709970.546400.513205.589104.70060HepG2GPKOW
LAMC1ENSG00000135862.510465.166407244.893400.530503.822802.51240HepG2GRSF1
LAMC1ENSG00000135862.58089.041106383.658100.341507.463605.95470HepG2HDGF
LAMC1ENSG00000135862.54118.022806618.71910-0.684606.215604.10130HepG2HNRNPA0
LAMC1ENSG00000135862.517126.561207315.755401.2271021.1290019.63180HepG2HNRNPA1
LAMC1ENSG00000135862.56490.034508431.44570-0.377609.238008.02570HepG2HNRNPF
LAMC1ENSG00000135862.511540.694207467.632600.6279010.328309.05560HepG2HNRNPK
LAMC1ENSG00000135862.513311.421008868.592100.5858034.6392032.57730HepG2HNRNPL
LAMC1ENSG00000135862.511324.953609515.064000.251101.964101.42580HepG2HNRNPLL
LAMC1ENSG00000135862.57137.694005864.709100.283303.214102.19660HepG2HNRNPM
LAMC1ENSG00000135862.55938.792308083.69330-0.4448012.8698011.63990HepG2HNRNPU
LAMC1ENSG00000135862.55915.699608302.53060-0.489009.105107.86100HepG2IGF2BP1
LAMC1ENSG00000135862.514384.787007034.169901.032005.697804.31210HepG2IGF2BP3
LAMC1ENSG00000135862.57108.044306112.249200.217604.574703.27400HepG2KIF1C
LAMC1ENSG00000135862.511320.6581014151.95580-0.322002.069301.35940HepG2LARP4
LAMC1ENSG00000135862.55156.890707951.76360-0.624808.042906.93530HepG2MAGOH
LAMC1ENSG00000135862.59002.497905776.671300.6400012.400609.87270HepG2NAA15
LAMC1ENSG00000135862.510094.180208184.219800.302502.241601.66840HepG2NCBP2
LAMC1ENSG00000135862.56436.511108746.53430-0.442402.895401.42900HepG2NKRF
LAMC1ENSG00000135862.511779.601009654.349000.286904.258903.31280HepG2NOL12
LAMC1ENSG00000135862.510560.876707287.756200.535106.054104.99750HepG2PABPC4
LAMC1ENSG00000135862.510262.896108001.380100.359008.424507.07440HepG2PARN
LAMC1ENSG00000135862.512536.720407342.253200.7718034.7581032.64840HepG2PRPF4
LAMC1ENSG00000135862.511538.907609783.629200.238006.801005.95630HepG2PUM1
LAMC1ENSG00000135862.513437.601009776.312600.458809.226508.03720HepG2PUM2
LAMC1ENSG00000135862.57634.248806810.797100.164602.447501.85860HepG2PUS1
LAMC1ENSG00000135862.55486.246408204.29860-0.5806014.3095013.04460HepG2QKI
LAMC1ENSG00000135862.512058.980807868.950400.615803.899803.06720HepG2RAVER1
LAMC1ENSG00000135862.510939.643307446.086500.5549010.584009.32470HepG2RBM25
LAMC1ENSG00000135862.510401.807908430.911900.303006.529905.75790HepG2NELFE
LAMC1ENSG00000135862.59426.906607852.544700.263505.259804.44420HepG2RECQL
LAMC1ENSG00000135862.55724.204909083.27760-0.6661012.8533011.57320HepG2RPLP0
LAMC1ENSG00000135862.55334.857907729.17500-0.534903.636802.55420HepG2RPS10
LAMC1ENSG00000135862.56066.796607519.98590-0.309802.858602.04590HepG2RPS2
LAMC1ENSG00000135862.55037.762207859.52160-0.641705.864404.70000HepG2RPS3A
LAMC1ENSG00000135862.54341.637707198.84290-0.7295037.6125035.66620HepG2SAFB2
LAMC1ENSG00000135862.54162.451105680.42270-0.448604.757903.53880HepG2SERBP1
LAMC1ENSG00000135862.518542.480808301.015501.1594016.6921014.96460HepG2SF3A3
LAMC1ENSG00000135862.55643.220609418.11080-0.7389014.2628012.79190HepG2SF3B1
LAMC1ENSG00000135862.510325.683508837.417900.224405.574304.63640HepG2SLBP
LAMC1ENSG00000135862.56601.618508394.99410-0.3467012.2686011.06590HepG2SMN1
LAMC1ENSG00000135862.55778.8313011320.71170-0.9701070.0058068.35730HepG2SRFBP1
LAMC1ENSG00000135862.515373.130308232.437700.9009061.6265060.05350HepG2SRSF1
LAMC1ENSG00000135862.510286.605209099.938600.176702.772602.14570HepG2SRSF5
LAMC1ENSG00000135862.55872.106908283.74260-0.4964015.6205014.20190HepG2SRSF7
LAMC1ENSG00000135862.56950.040609828.92980-0.5000017.3354016.28240HepG2SSB
LAMC1ENSG00000135862.54119.471506837.22850-0.731007.697105.78790HepG2STIP1
LAMC1ENSG00000135862.512159.7888010348.856400.232505.636404.80660HepG2SUCLG1
LAMC1ENSG00000135862.56719.167705739.834700.227202.313801.44850HepG2SUPT6H
LAMC1ENSG00000135862.512308.709807400.034900.7340026.1755024.68280HepG2TAF15
LAMC1ENSG00000135862.513887.015409273.887200.582409.368108.14940HepG2TARDBP
LAMC1ENSG00000135862.510985.462606799.200700.6921016.7214014.72040HepG2TIA1
LAMC1ENSG00000135862.56811.667607925.05270-0.218403.489902.87270HepG2TRIM56
LAMC1ENSG00000135862.54698.412407271.15370-0.630009.671908.48400HepG2U2AF1
LAMC1ENSG00000135862.56151.380909531.14040-0.631708.021006.56730HepG2UBE2L3
LAMC1ENSG00000135862.52878.524204077.01420-0.502205.401704.33610HepG2UCHL5
LAMC1ENSG00000135862.58397.824807361.731900.189903.059002.33260HepG2UPF1
LAMC1ENSG00000135862.54379.956506319.67140-0.528904.131702.89400HepG2UPF2
LAMC1ENSG00000135862.59970.892407107.462400.4883017.3859016.07590HepG2UTP3
LAMC1ENSG00000135862.56348.328507245.98910-0.190803.589702.84060HepG2ZC3H8
LAMC1ENSG00000135862.512322.791108096.495400.6059036.3122034.91460HepG2ZNF622
LAMC1ENSG00000135862.537.0063010.138701.867802.986902.07880K562BOP1
LAMC1ENSG00000135862.541.8749016.613001.333702.347401.33550K562CPEB4
LAMC1ENSG00000135862.524.150007.459901.694702.257001.32200K562DDX3X
LAMC1ENSG00000135862.551.4430010.286702.322105.426804.32030K562GPKOW
LAMC1ENSG00000135862.544.4091013.844201.681502.726301.97460K562GRSF1
LAMC1ENSG00000135862.568.449608.790602.960907.905006.23410K562KRR1
LAMC1ENSG00000135862.534.502104.434502.959704.829903.59090K562PSIP1
LAMC1ENSG00000135862.542.1700013.327601.661702.901101.91900K562PUM2
LAMC1ENSG00000135862.523.132004.808302.266202.597101.80770K562RPS19
LAMC1ENSG00000135862.542.720209.792802.125003.857802.69680K562SF3B1
LAMC1ENSG00000135862.520.403704.574002.157202.298001.37600K562SUPV3L1
LAMC1ENSG00000135862.528.327509.414501.589102.355601.61450K562U2AF2
LAMC1ENSG00000135862.512.8665045.73430-1.829701.913101.30790K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LAMC1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LAMC1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LAMC1 is not avaliable on ENCORE database.