KLF16

General Information

Gene Name       : KLF16
Gene ID             : ENSG00000129911.8
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: KLF16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KLF16ENSG00000129911.80.361.801.08ENCSR000AEF
HepG2KLF16ENSG00000129911.85.272.153.71ENCSR985KAT
K562KLF16ENSG00000129911.89.454.587.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KLF16 is not avaliable on ENCORE database.



Proteins bound to RNA
  • KLF16 RNA is bound by 21 proteins.  







eCLIP assay for KLF16 is not avaliable on ENCORE database.





21 proteins are bound to KLF16 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1918538761853955-3'-UTR,intron-Distal5.0573238.29721K562UPF1
chr1918541571854230-3'-UTR,intron-Distal,intron-Proximal5.6355023.62966HepG2AKAP1
chr1918541271854220-3'-UTR,intron-Distal,intron-Proximal4.7603229.90015K562AKAP1
chr1918528011852831-3'-UTR,intron-Distal4.4453617.70314K562UPF1
chr1918539211853956-3'-UTR,intron-Distal4.914777.79013HepG2AKAP1
chr1918532071853257-3'-UTR,intron-Distal3.069813.94332HepG2FAM120A
chr1918532091853255-3'-UTR,intron-Distal3.7201913.00629K562AKAP1
chr1918541741854219-3'-UTR,intron-Distal,intron-Proximal4.7263024.07611K562UPF1
chr1918532031853276-3'-UTR,intron-Distal3.275198.54752K562FAM120A
chr1918536111853650-3'-UTR,intron-Distal3.261743.41957K562DROSHA
chr1918539101853943-3'-UTR,intron-Distal4.476108.21878K562FAM120A
chr1918540071854043-3'-UTR,intron-Distal5.3511510.50616HepG2UPF1
chr1918538341853893-3'-UTR,intron-Distal3.201414.01563K562LIN28B
chr1918536021853704-3'-UTR,intron-Distal5.7319142.14516HepG2UPF1
chr1918539931854038-3'-UTR,intron-Distal3.5297812.29698K562AKAP1
chr1918536571853702-3'-UTR,intron-Distal4.3543810.26427K562FAM120A
chr1918531961853260-3'-UTR,intron-Distal4.7517949.10102K562UPF1
chr1918536391853702-3'-UTR,intron-Distal4.1458016.01957HepG2AKAP1
chr1918531191853186-3'-UTR,intron-Distal5.378089.45100HepG2AKAP1
chr1918540571854115-3'-UTR,intron-Distal5.9527737.46656K562UPF1
chr1918529221852988-3'-UTR,intron-Distal3.480194.26844K562DDX55
chr1918532061853252-3'-UTR,intron-Distal4.4950511.04592HepG2UPF1
chr1918535741853657-3'-UTR,intron-Distal5.2832333.15763K562FAM120A
chr1918541181854191-3'-UTR,intron-Distal,intron-Proximal6.5558541.81002HepG2UPF1
chr1918525791852630-3'-UTR,intron-Distal3.9907621.38189K562UPF1
chr1918540791854118-3'-UTR,intron-Distal5.6724914.22450HepG2UPF1
chr1918526371852688-3'-UTR,intron-Distal5.465978.57616HepG2UPF1
chr1918531251853209-3'-UTR,intron-Distal4.5835815.96738K562AKAP1
chr1918537501853783-3'-UTR,intron-Distal5.310006.77594K562FAM120A
chr1918529391852983-3'-UTR,intron-Distal3.324463.30761K562DDX52
chr1918532121853260-3'-UTR,intron-Distal3.916528.41991HepG2AKAP1
chr1918529401852982-3'-UTR,intron-Distal4.8594724.94036K562UPF1
chr1918540631854122-3'-UTR,intron-Distal4.2353811.76398HepG2AKAP1
chr1918536091853695-3'-UTR,intron-Distal3.491778.66107HepG2FAM120A
chr1918534921853544-3'-UTR,intron-Distal5.5903117.22152K562AKAP1
chr1918535991853630-3'-UTR,intron-Distal4.168913.83202K562DDX6
chr1918540691854127-3'-UTR,intron-Distal4.6022312.46153K562AKAP1
chr1918538731853958-3'-UTR,intron-Distal5.1685217.14784HepG2UPF1
chr1918535721853653-3'-UTR,intron-Distal5.0265054.39638K562UPF1
chr1918531181853191-3'-UTR,intron-Distal3.110526.05703K562DDX55
chr1918524221852450-3'-UTR,intron-Distal4.494386.62754K562PUM2
chr1918525501852595-3'-UTR,intron-Distal3.322383.25727K562METAP2
chr1918541911854239-3'-UTR,intron-Distal,intron-Proximal6.2381031.98126HepG2UPF1
chr1918537591853795-3'-UTR,intron-Distal6.9080325.89421K562UPF1
chr1918536541853702-3'-UTR,intron-Distal4.9474134.75007K562UPF1
chr1918526271852658-3'-UTR,intron-Distal4.700496.57313K562PABPC4
chr1918526481852690-3'-UTR,intron-Distal5.264339.71345HepG2AKAP1
chr1918542051854301-3'-UTR,intron-Distal,intron-Proximal5.3657970.35766K562PUM2
chr1918526421852690-3'-UTR,intron-Distal3.909538.53392K562FAM120A
chr1918530631853196-3'-UTR,intron-Distal5.7915482.28540K562UPF1
chr1918526301852689-3'-UTR,intron-Distal5.7220735.04290K562UPF1
chr1918525771852694-3'-UTR,intron-Distal3.9987911.62353K562DDX6
chr1918530931853154-3'-UTR,intron-Distal3.5416410.58114K562FAM120A
chr1918532601853275-3'-UTR,intron-Distal4.811629.04751K562UPF1
chr1918539051853967-3'-UTR,intron-Distal5.0913813.82869K562AKAP1
chr1918540041854037-3'-UTR,intron-Distal3.621074.41670HepG2AKAP1
chr1918536021853691-3'-UTR,intron-Distal3.162756.74715HepG2NKRF
chr1918536031853691-3'-UTR,intron-Distal4.3869024.69713K562AKAP1
chr1918531541853195-3'-UTR,intron-Distal3.087617.14956K562FAM120A
chr1918535891853639-3'-UTR,intron-Distal3.029425.02270HepG2AKAP1
chr1918634071863549-5'-UTR,CDS,intron-Distal,intron-Proximal4.837858.45138K562DDX3X
chr1918633301863376-CDS,intron-Distal3.716463.53770HepG2DDX3X
chr1918631351863177-CDS,intron-Distal3.575865.69025HepG2UPF1
chr1918589391858980-intron-Distal3.712635.32871HepG2CSTF2T
chr1918565131856572-intron-Distal5.4816312.37631HepG2CSTF2T
chr1918613351861398-intron-Distal3.328303.28007HepG2NKRF
chr1918586191858672-intron-Distal3.161813.50009K562CSTF2T
chr1918579281858037-intron-Distal3.658354.02206K562CSTF2T
chr1918623041862354-intron-Distal4.428424.48497K562NONO
chr1918606201860681-intron-Distal5.3789910.82858HepG2CSTF2T
chr1918568671856922-intron-Distal4.3717910.59961HepG2CSTF2T
chr1918551621855210-intron-Distal3.490277.44912HepG2CSTF2T
chr1918609551860998-intron-Distal3.854416.48652HepG2CSTF2T
chr1918623921862457-intron-Distal4.553186.16396K562NONO
chr1918589281858968-intron-Distal4.004293.96304K562CSTF2T
chr1918603371860366-intron-Distal4.434115.67757HepG2CSTF2T
chr1918613651861421-intron-Distal4.727445.15564HepG2FAM120A
chr1918610621861105-intron-Distal3.139613.50009K562CSTF2T
chr1918628451862880-intron-Distal,intron-Proximal4.033164.88931HepG2FAM120A
chr1918570391857096-intron-Distal4.960168.46281HepG2CSTF2T
chr1918565151856560-intron-Distal3.042713.43220HepG2FAM120A
chr1918620511862094-intron-Distal4.077666.00449HepG2FAM120A
chr1918573601857484-intron-Distal4.8294413.60434HepG2CSTF2T
chr1918593091859447-intron-Distal4.092883.57928K562GTF2F1
chr1918565001856559-intron-Distal3.281613.58549K562NONO
chr1918622301862264-intron-Distal4.305574.86859HepG2CSTF2T
chr1918557251855774-intron-Distal3.797606.36044HepG2CSTF2T
chr1918612021861239-intron-Distal4.435435.05096K562EWSR1
chr1918577931857834-intron-Distal3.051674.74807HepG2CSTF2T
chr1918626581862702-intron-Distal4.008105.86270K562TIA1
chr1918610981861142-intron-Distal4.388404.57154HepG2FAM120A
chr1918613431861395-intron-Distal4.509455.42636K562NONO
chr1918620461862103-intron-Distal5.264918.82781K562EWSR1
chr1918623211862350-intron-Distal3.791023.17740K562CSTF2T
chr1918608761860902-intron-Distal3.297603.72734HepG2CSTF2T
chr1918595501859615-intron-Distal5.098058.72481HepG2CSTF2T
chr1918606431860696-intron-Distal4.969856.99055K562EWSR1
chr1918624211862476-intron-Distal4.166089.06344HepG2CSTF2T
chr1918551581855228-intron-Distal4.119574.24431HepG2RBFOX2
chr1918607961860857-intron-Distal3.824244.51839K562EWSR1
chr1918582771858316-intron-Distal3.609844.84557HepG2CSTF2T
chr1918594741859499-intron-Distal4.136634.36133HepG2CSTF2T
chr1918620471862095-intron-Distal4.441525.01722K562CSTF2T
chr1918628421862878-intron-Distal,intron-Proximal4.273144.68055HepG2CSTF2T
chr1918618281861889-intron-Distal3.595407.92482HepG2CSTF2T
chr1918582501858277-intron-Distal3.266903.46580HepG2CSTF2T
chr1918626251862708-intron-Distal3.348958.35866K562NONO
chr1918613531861449-intron-Distal5.7321213.03935K562EWSR1
chr1918590411859085-intron-Distal3.919323.43867K562CSTF2T
chr1918606271860674-intron-Distal3.549634.25264K562NONO
chr1918606061860683-intron-Distal3.356566.12137K562CSTF2T
chr1918590351859100-intron-Distal5.221407.51888HepG2FAM120A
chr1918601611860184-intron-Distal4.009613.94684HepG2CSTF2T
chr1918613421861411-intron-Distal3.576703.80752K562AKAP8L
chr1918593801859460-intron-Distal5.159708.72707K562EWSR1
chr1918557231855784-intron-Distal4.876115.95343K562EWSR1
chr1918620511862103-intron-Distal3.7666310.41173HepG2CSTF2T
chr1918588361858875-intron-Distal3.629084.84557HepG2CSTF2T
chr1918593641859418-intron-Distal3.581128.27616HepG2CSTF2T
chr1918548791854929-intron-Distal3.189403.84859K562NONO
chr1918626361862711-intron-Distal4.679905.84281K562GTF2F1
chr1918590391859107-intron-Distal3.653148.61847HepG2CSTF2T
chr1918565721856599-intron-Distal4.279334.86859HepG2CSTF2T
chr1918593671859411-intron-Distal4.017054.04290K562CSTF2T
chr1918579361857962-intron-Distal3.264913.36199K562EWSR1
chr1918592211859275-intron-Distal3.917335.85439HepG2CSTF2T
chr1918565151856554-intron-Distal4.666956.27023K562EWSR1
chr1918623991862478-intron-Distal3.080763.96313HepG2FAM120A
chr1918603841860417-intron-Distal3.273143.72734HepG2CSTF2T
chr1918624081862471-intron-Distal4.567295.81141K562CSTF2T
chr1918603771860426-intron-Distal4.030193.07008K562NONO
chr1918610631861142-intron-Distal4.290237.50476K562EWSR1
chr1918586451858680-intron-Distal3.636635.32871HepG2CSTF2T
chr1918620491862094-intron-Distal3.725375.85821K562NONO
chr1918613381861419-intron-Distal3.188734.34872K562SLTM
chr1918624391862486-intron-Distal3.491393.31097K562SLTM
chr1918617321861787-intron-Distal4.921567.60000HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KLF16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KLF16 is not available on ENCORE database.

  • 88 RBPs can affect the levels of KLF16.  








The Knockdown/knockout RNA-Seq assay for KLF16 is not available on ENCORE database.





88 RBPs can affect the gene expression of KLF16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KLF16ENSG00000129911.4200.94880316.35300-0.654702.979602.16480HepG2ASCC1
KLF16ENSG00000129911.4512.77570666.85720-0.379003.147802.42190HepG2AUH
KLF16ENSG00000129911.4171.67790259.97040-0.598603.139002.17910HepG2BCLAF1
KLF16ENSG00000129911.4320.91490188.594600.766803.558202.88910HepG2BOP1
KLF16ENSG00000129911.4115.48980183.42750-0.667402.747401.97780HepG2CALR
KLF16ENSG00000129911.4222.97210329.31400-0.562602.174401.50070HepG2CNOT7
KLF16ENSG00000129911.4491.02350331.350300.567305.358904.51680HepG2CELF1
KLF16ENSG00000129911.4107.91900190.88690-0.822803.917803.12510HepG2DDX21
KLF16ENSG00000129911.4616.42870366.223100.751105.949005.06500HepG2DDX3X
KLF16ENSG00000129911.4377.54590518.57020-0.457902.917801.58950HepG2DDX47
KLF16ENSG00000129911.4554.27000314.737600.816306.084405.19740HepG2DDX6
KLF16ENSG00000129911.4228.83010462.95840-1.0166012.4074011.18560HepG2DKC1
KLF16ENSG00000129911.4272.54940146.066200.899804.541603.65800HepG2DNAJC21
KLF16ENSG00000129911.4231.11690144.775500.674704.259503.48350HepG2DNAJC2
KLF16ENSG00000129911.4515.95240302.421600.770605.839404.99570HepG2EIF2S1
KLF16ENSG00000129911.4587.38680325.466600.851704.293103.44820HepG2EIF4B
KLF16ENSG00000129911.4257.02940351.48720-0.451502.404701.61580HepG2EIF4G1
KLF16ENSG00000129911.4242.66160336.69270-0.472502.171501.44330HepG2EIF4G2
KLF16ENSG00000129911.4268.47120367.61380-0.453402.406501.38740HepG2ESF1
KLF16ENSG00000129911.4450.47030765.67000-0.7653011.7364010.63900HepG2ETF1
KLF16ENSG00000129911.4574.87170337.345100.768906.182305.17440HepG2FXR1
KLF16ENSG00000129911.4540.18190317.023000.768806.240305.22040HepG2HNRNPK
KLF16ENSG00000129911.4214.94460295.63520-0.459902.323701.45070HepG2HNRNPM
KLF16ENSG00000129911.4239.25150166.441400.523403.102402.33020HepG2ILF2
KLF16ENSG00000129911.4478.68380323.321100.566002.395001.62640HepG2LARP4
KLF16ENSG00000129911.4449.27050337.463900.412801.943801.38900HepG2MAGOH
KLF16ENSG00000129911.4666.78310339.318500.974508.851307.77520HepG2MATR3
KLF16ENSG00000129911.4259.99440346.76180-0.415502.147101.42980HepG2MSI2
KLF16ENSG00000129911.4172.5643099.513200.794102.863001.38720HepG2NOLC1
KLF16ENSG00000129911.4166.4425050.364001.724504.760602.26460HepG2NUFIP2
KLF16ENSG00000129911.4427.61140309.151300.467902.399901.72350HepG2PABPC4
KLF16ENSG00000129911.4496.32740320.586500.630505.217304.42540HepG2PCBP1
KLF16ENSG00000129911.4144.32750226.85390-0.652403.070402.22360HepG2PRPF8
KLF16ENSG00000129911.4573.51720357.980600.679906.078805.27010HepG2PUM1
KLF16ENSG00000129911.4317.38760492.87260-0.635006.728105.83950HepG2PUS1
KLF16ENSG00000129911.4424.93180235.478600.851506.247304.74890HepG2RBM27
KLF16ENSG00000129911.4191.92940330.93710-0.786003.884802.93720HepG2RPS3A
KLF16ENSG00000129911.4358.71290221.687300.694204.080502.76350HepG2RPS5
KLF16ENSG00000129911.4245.12990145.108500.756305.033804.21040HepG2SAFB2
KLF16ENSG00000129911.4254.50510169.221300.588703.550702.83710HepG2SMN1
KLF16ENSG00000129911.4305.80580173.572900.817003.242302.19550HepG2SMNDC1
KLF16ENSG00000129911.4142.0267043.849301.695402.745401.43990HepG2SNRNP200
KLF16ENSG00000129911.4102.92330206.21830-1.002603.264302.41320HepG2SNRNP70
KLF16ENSG00000129911.4174.41750627.53620-1.8472043.4526042.00950HepG2SSB
KLF16ENSG00000129911.4167.85100292.87310-0.803104.411303.58670HepG2SUPV3L1
KLF16ENSG00000129911.4181.91380318.73240-0.809102.850902.28220HepG2TAF15
KLF16ENSG00000129911.4291.37990196.280000.569902.365401.43750HepG2TFIP11
KLF16ENSG00000129911.4264.54300159.745300.727605.063004.34620HepG2TRIM56
KLF16ENSG00000129911.4293.42300172.983900.762204.156103.22520HepG2UCHL5
KLF16ENSG00000129911.4486.27220328.379900.566302.814502.21340HepG2UTP3
KLF16ENSG00000129911.497.55040281.11260-1.5269016.8496015.43140HepG2ZC3H8
KLF16ENSG00000129911.4727.72790526.316200.467404.760304.04950K562AGGF1
KLF16ENSG00000129911.4778.41070578.338900.428502.760801.77990K562AKAP8
KLF16ENSG00000129911.41005.56520547.655100.8766012.3122010.79660K562AKAP8L
KLF16ENSG00000129911.4647.72490476.708400.442203.853002.70800K562BCLAF1
KLF16ENSG00000129911.4533.99190348.222100.616702.896601.80390K562CNOT7
KLF16ENSG00000129911.4919.22690684.953400.424304.208302.82150K562CPEB4
KLF16ENSG00000129911.4572.11660361.654500.661603.714602.46650K562CSTF2
KLF16ENSG00000129911.41095.66660708.802200.6283010.380809.21220K562DDX47
KLF16ENSG00000129911.4381.67260239.401600.672804.989103.93520K562EIF3G
KLF16ENSG00000129911.4166.01270256.11940-0.625503.328301.55620K562FASTKD2
KLF16ENSG00000129911.489.12220238.75470-1.4217010.031407.71420K562FKBP4
KLF16ENSG00000129911.4136.43380211.64410-0.633403.116601.68360K562FUS
KLF16ENSG00000129911.4628.64080471.527800.414802.328101.76480K562FXR1
KLF16ENSG00000129911.437.71280163.35170-2.1149013.0484011.26430K562G3BP2
KLF16ENSG00000129911.4364.98900274.918000.408801.984501.46790K562HNRNPC
KLF16ENSG00000129911.4391.58300245.523700.673404.560503.04890K562HNRNPF
KLF16ENSG00000129911.4514.44150356.521100.528902.920001.85700K562IGF2BP2
KLF16ENSG00000129911.4588.40630374.406300.652103.785002.79310K562MAGOH
KLF16ENSG00000129911.4435.84760270.716300.686904.317102.34500K562NUSAP1
KLF16ENSG00000129911.4461.30510649.30890-0.493202.665601.85140K562PCBP3
KLF16ENSG00000129911.4359.52460498.03820-0.470203.201502.33630K562POLR2G
KLF16ENSG00000129911.4761.35720455.484800.741102.927002.08040K562PPIG
KLF16ENSG00000129911.4388.59820246.498800.656602.820901.90610K562PSIP1
KLF16ENSG00000129911.4814.37080363.780401.1625012.0251010.69430K562PTBP1
KLF16ENSG00000129911.4863.81500543.129100.669306.758405.95290K562PUS1
KLF16ENSG00000129911.4811.03040529.192900.615907.317606.38490K562RBM15
KLF16ENSG00000129911.4540.64150348.667200.632705.266204.06230K562RBM22
KLF16ENSG00000129911.4341.83410224.927200.603703.753002.59730K562RCC2
KLF16ENSG00000129911.4607.25050366.952600.726606.591204.82620K562NELFE
KLF16ENSG00000129911.4577.13660410.743400.490602.532701.75310K562RPS19
KLF16ENSG00000129911.4125.38700213.94760-0.770903.231802.17900K562SF3B1
KLF16ENSG00000129911.4107.49020219.83490-1.032206.476203.72800K562SND1
KLF16ENSG00000129911.4363.77830213.222000.770605.405203.82890K562SRFBP1
KLF16ENSG00000129911.4620.80900356.657900.799508.296807.08180K562SRSF1
KLF16ENSG00000129911.4376.94880249.149300.597303.524602.31550K562SRSF4
KLF16ENSG00000129911.4453.58370336.915200.428902.469401.48430K562SRSF5
KLF16ENSG00000129911.468.95840160.34410-1.217404.816202.67250K562TAF15
KLF16ENSG00000129911.4644.62010360.892500.836808.182906.88490K562TARDBP
KLF16ENSG00000129911.4102.97970170.21670-0.725003.025801.35780K562TBRG4
KLF16ENSG00000129911.4502.85600348.139600.530404.017903.00490K562TIA1
KLF16ENSG00000129911.4349.46160237.087100.559602.853701.90290K562TIAL1
KLF16ENSG00000129911.4498.95940341.790700.545703.835302.51590K562TRA2A
KLF16ENSG00000129911.4394.96890251.906700.648704.234203.00890K562TRIM56
KLF16ENSG00000129911.498.18610158.27570-0.688802.454301.43620K562U2AF1
KLF16ENSG00000129911.479.91620163.48560-1.032605.566604.42890K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KLF16 is not available on ENCORE database.






No RBPs affect the alternative splcing events of KLF16 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for KLF16 is not avaliable on ENCORE database.