INO80D

General Information

Gene Name       : INO80D
Gene ID             : ENSG00000114933.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: INO80D)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878INO80DENSG00000114933.153.112.672.89ENCSR000AEF
HepG2INO80DENSG00000114933.152.083.182.63ENCSR985KAT
K562INO80DENSG00000114933.151.071.151.11ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for INO80D is not avaliable on ENCORE database.



Proteins bound to RNA
  • INO80D RNA is bound by 12 proteins.  







eCLIP assay for INO80D is not avaliable on ENCORE database.





12 proteins are bound to INO80D RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2206927726206927772-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.865157.65975HepG2BCLAF1
chr2206858579206858647-3'-UTR,intron-Distal4.647603.66896HepG2FUBP3
chr2206862613206862677-3'-UTR,intron-Distal3.458704.33455K562LIN28B
chr2206862614206862675-3'-UTR,intron-Distal6.0725014.83253HepG2LIN28B
chr2206858514206858565-3'-UTR,intron-Distal4.843764.37192HepG2FUBP3
chr2206858490206858564-3'-UTR,intron-Distal5.885065.06516K562PUM2
chr2206921553206921640-5'-UTR,CDS,intron-Distal3.622558.25092HepG2BCLAF1
chr2206892850206892930-CDS,intron-Distal3.761626.67313HepG2BCLAF1
chr2206920915206921028-CDS,intron-Distal,intron-Proximal3.120674.96088HepG2GRWD1
chr2206911223206911273-CDS,intron-Distal,intron-Proximal3.313733.59112HepG2PPIG
chr2206874300206874428-CDS,intron-Distal,intron-Proximal3.351883.61259K562ZNF622
chr2206892954206892995-CDS,intron-Distal3.461593.27569HepG2BCLAF1
chr2206884429206884489-CDS,intron-Distal,intron-Proximal4.319363.38968HepG2BCLAF1
chr2206911221206911340-CDS,intron-Distal,intron-Proximal3.614895.58683HepG2GRWD1
chr2206920917206920962-CDS,intron-Distal,intron-Proximal4.912707.06060HepG2PPIG
chr2206921142206921243-CDS,intron-Distal3.040629.00189HepG2BCLAF1
chr2206882475206882526-CDS,intron-Distal3.310053.28366HepG2BCLAF1
chr2206874322206874412-CDS,intron-Distal,intron-Proximal3.978227.58497HepG2GRWD1
chr2206893007206893063-CDS,intron-Distal,intron-Proximal3.788664.51739HepG2BCLAF1
chr2206921450206921553-CDS,intron-Distal4.3100511.55000HepG2BCLAF1
chr2206911273206911339-CDS,intron-Distal,intron-Proximal4.9141510.78364HepG2PPIG
chr2206911229206911273-CDS,intron-Distal3.754074.76554HepG2BCLAF1
chr2206872025206872139-CDS,intron-Distal3.175933.79741HepG2GRWD1
chr2206921112206921173-CDS,intron-Distal3.164573.99175HepG2IGF2BP1
chr2206874461206874510-CDS,intron-Distal4.111843.45943HepG2BCLAF1
chr2206921142206921234-CDS,intron-Distal3.009303.40321HepG2GRWD1
chr2206950269206950314-intron-Distal4.531234.62429HepG2NKRF
chr2206944999206945045-intron-Distal3.484918.61584HepG2HNRNPM
chr2206950316206950403-intron-Distal5.9709411.09551HepG2EFTUD2
chr2206950347206950400-intron-Distal4.137755.09764HepG2NKRF
chr2206950342206950401-intron-Distal4.073874.10564HepG2CSTF2T
chr2206944911206944948-intron-Distal4.344863.34098HepG2HNRNPM
chr2206950057206950121-intron-Distal3.622446.60730HepG2NKRF
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for INO80D is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for INO80D is not available on ENCORE database.

  • 91 RBPs can affect the levels of INO80D.  








The Knockdown/knockout RNA-Seq assay for INO80D is not available on ENCORE database.





91 RBPs can affect the gene expression of INO80D :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
INO80DENSG00000114933.11895.255201215.05050-0.440603.574802.50980HepG2ABCF1
INO80DENSG00000114933.11539.85080839.18830-0.636402.649601.73460HepG2BCCIP
INO80DENSG00000114933.111016.809701555.58890-0.613404.812303.51100HepG2CCAR1
INO80DENSG00000114933.11852.882401498.41760-0.813006.117204.98000HepG2CNOT7
INO80DENSG00000114933.111063.65280858.438100.309101.906101.32410HepG2CPSF6
INO80DENSG00000114933.11913.087901108.69230-0.280002.829902.18090HepG2CELF1
INO80DENSG00000114933.11778.195101014.89860-0.383103.924702.95200HepG2DDX19B
INO80DENSG00000114933.111436.66360974.818700.559402.729301.75840HepG2DDX59
INO80DENSG00000114933.111123.31460862.221400.381503.115102.07710HepG2DHX30
INO80DENSG00000114933.11636.88310893.96600-0.489205.616704.64470HepG2DNAJC21
INO80DENSG00000114933.11620.29490886.03740-0.514407.785206.76320HepG2DNAJC2
INO80DENSG00000114933.111014.47570730.777100.473102.932101.78740HepG2AGO1
INO80DENSG00000114933.111482.228501179.844400.329102.072301.55120HepG2EIF2S1
INO80DENSG00000114933.112081.067601478.353700.493209.691908.67650HepG2ETF1
INO80DENSG00000114933.11690.714001072.38620-0.634706.057404.81970HepG2EWSR1
INO80DENSG00000114933.111311.22100859.904900.608602.216301.31560HepG2FTO
INO80DENSG00000114933.111080.19620613.727100.8155010.538409.05190HepG2FUBP3
INO80DENSG00000114933.111065.752501315.65760-0.303901.878001.30350HepG2FXR1
INO80DENSG00000114933.11952.241901220.37800-0.357902.222001.62280HepG2G3BP1
INO80DENSG00000114933.11502.48900652.20290-0.376202.106301.32970HepG2GEMIN5
INO80DENSG00000114933.11810.595801387.16720-0.775106.235904.55870HepG2GRSF1
INO80DENSG00000114933.11924.337001267.42940-0.455402.646201.31410HepG2HNRNPA0
INO80DENSG00000114933.11574.54420902.53010-0.651606.756905.81380HepG2HNRNPA1
INO80DENSG00000114933.11799.066101237.62430-0.631204.986303.08310HepG2HNRNPAB
INO80DENSG00000114933.11705.065201297.94920-0.880408.364605.87890HepG2HNRNPD
INO80DENSG00000114933.11891.43280732.567300.283102.434701.75920HepG2HNRNPF
INO80DENSG00000114933.11797.949001086.21760-0.444903.586402.82490HepG2HNRNPL
INO80DENSG00000114933.11570.99030997.25010-0.8045016.1773014.80610HepG2HNRNPU
INO80DENSG00000114933.111106.420001549.64790-0.486003.325501.97330HepG2HSPD1
INO80DENSG00000114933.111017.094401460.85570-0.522403.159901.73790HepG2ILF3
INO80DENSG00000114933.11824.977101428.14820-0.791707.781305.69400HepG2KHDRBS1
INO80DENSG00000114933.111007.049801548.36190-0.620604.671003.04230HepG2KRR1
INO80DENSG00000114933.111171.016901642.12530-0.487803.391502.47240HepG2LARP4
INO80DENSG00000114933.11743.444701323.45680-0.832008.981807.89830HepG2MATR3
INO80DENSG00000114933.111914.753701354.609700.499204.274503.49340HepG2NCBP2
INO80DENSG00000114933.111908.021001369.669000.478102.294601.50060HepG2PABPC1
INO80DENSG00000114933.111556.732201206.267400.367902.535501.84180HepG2PABPC4
INO80DENSG00000114933.11771.34030987.12120-0.355903.747502.77960HepG2PARN
INO80DENSG00000114933.11887.629001148.07060-0.371203.758003.07380HepG2PCBP1
INO80DENSG00000114933.111032.036301504.95930-0.544204.275702.03140HepG2PPIG
INO80DENSG00000114933.111044.57660839.151900.315803.169402.34720HepG2PRPF4
INO80DENSG00000114933.11918.496701117.66570-0.283102.627002.02240HepG2PUS1
INO80DENSG00000114933.111573.474401265.104200.314603.312802.63790HepG2QKI
INO80DENSG00000114933.112195.712501148.232800.9352020.7290018.99290HepG2RBM25
INO80DENSG00000114933.111087.442801300.12410-0.257702.018201.54050HepG2NELFE
INO80DENSG00000114933.11503.61140712.70190-0.501003.226102.56950HepG2RPS19
INO80DENSG00000114933.11681.97820927.79510-0.444102.446601.69060HepG2RPS2
INO80DENSG00000114933.11901.188601504.99130-0.739906.382505.17200HepG2RPS3A
INO80DENSG00000114933.11699.33120888.10210-0.344703.657802.93570HepG2SAFB2
INO80DENSG00000114933.112123.503601216.187100.8040023.5320022.09370HepG2SF3B4
INO80DENSG00000114933.11692.943401035.68850-0.5798010.565009.43920HepG2SMN1
INO80DENSG00000114933.112336.782601395.650800.7435024.1624023.06120HepG2SRFBP1
INO80DENSG00000114933.111018.923001269.49910-0.317202.887202.40700HepG2SRSF1
INO80DENSG00000114933.111662.35770989.043900.749007.052705.40140HepG2SRSF3
INO80DENSG00000114933.11892.19770719.722200.309802.809402.10780HepG2SRSF7
INO80DENSG00000114933.111746.885301032.859500.7580021.0960019.83350HepG2SRSF9
INO80DENSG00000114933.111135.619401543.80910-0.443003.283301.89140HepG2SSRP1
INO80DENSG00000114933.111493.767701033.133600.531803.096001.81930HepG2SUB1
INO80DENSG00000114933.11932.919201267.23370-0.441906.305805.43710HepG2SUCLG1
INO80DENSG00000114933.111714.367001141.250500.5870010.762509.77230HepG2TAF15
INO80DENSG00000114933.11752.57070969.05790-0.364803.130002.60350HepG2TIAL1
INO80DENSG00000114933.11680.45580977.67430-0.522905.033504.31830HepG2TRIM56
INO80DENSG00000114933.112372.640601049.388301.1768023.5789021.68170HepG2U2AF1
INO80DENSG00000114933.11310.73880485.29630-0.643202.974002.19000HepG2UCHL5
INO80DENSG00000114933.11861.043101215.69130-0.497602.969601.86920HepG2XRCC6
INO80DENSG00000114933.11499.36370808.58150-0.695302.890902.14970HepG2XRN2
INO80DENSG00000114933.11991.11090828.127700.259102.484101.84200HepG2ZC3H8
INO80DENSG00000114933.111479.53380485.492901.6075036.6144034.68540K562AQR
INO80DENSG00000114933.11505.43380655.82400-0.375802.957801.81100K562CPEB4
INO80DENSG00000114933.11557.17760341.470500.706305.872404.50920K562EFTUD2
INO80DENSG00000114933.11541.81330365.654100.567203.479602.30710K562EIF3D
INO80DENSG00000114933.11807.80900395.437301.0305014.9677012.98000K562EIF4A3
INO80DENSG00000114933.11312.47800542.53820-0.796007.407805.95800K562FIP1L1
INO80DENSG00000114933.11532.37750411.241200.372402.701602.10270K562FXR1
INO80DENSG00000114933.11563.55330396.449500.507302.712402.01420K562G3BP2
INO80DENSG00000114933.11388.72990558.83030-0.523603.526002.67540K562GRSF1
INO80DENSG00000114933.11711.70590359.615600.984703.570402.12690K562HNRNPA2B1
INO80DENSG00000114933.11602.78830266.937001.1751015.2246013.90670K562HNRNPC
INO80DENSG00000114933.11282.59960446.26480-0.659104.070402.92760K562HNRNPM
INO80DENSG00000114933.11421.67240735.53930-0.802708.464107.08740K562HSPD1
INO80DENSG00000114933.11580.86830442.343600.392902.385201.60210K562MAGOH
INO80DENSG00000114933.11674.46060443.849400.603603.781802.70920K562NAA15
INO80DENSG00000114933.11616.97780314.414500.972502.595201.64440K562PABPN1
INO80DENSG00000114933.11626.37970393.625000.670105.998104.54250K562PCBP2
INO80DENSG00000114933.11327.55670615.91620-0.911009.904308.07360K562PPIG
INO80DENSG00000114933.11701.02770332.289001.0769012.6404011.02620K562PRPF8
INO80DENSG00000114933.111673.31920764.710501.1296013.3823011.56920K562PUF60
INO80DENSG00000114933.11845.37880528.191000.678406.590905.79430K562PUS1
INO80DENSG00000114933.11737.54890514.688200.518905.387504.58510K562RBM15
INO80DENSG00000114933.11536.19770412.219600.379302.287401.52810K562RBM22
INO80DENSG00000114933.11733.11720287.455201.350606.822704.65570K562SF1
INO80DENSG00000114933.11703.47750330.256701.090804.419402.75290K562SNRNP200
INO80DENSG00000114933.11593.86780477.164200.315602.392001.51330K562SRPK2
INO80DENSG00000114933.11531.01190421.263000.333901.932001.32860K562SRSF1
INO80DENSG00000114933.11440.31040321.782900.452302.337401.40820K562SUPV3L1
INO80DENSG00000114933.11583.47800384.334900.602204.103302.71400K562U2AF1
INO80DENSG00000114933.11547.36720396.919000.463603.576302.66210K562U2AF2
INO80DENSG00000114933.11746.50960388.563400.941904.177702.01850K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for INO80D is not available on ENCORE database.






No RBPs affect the alternative splcing events of INO80D on ENCORE database.





The Knockdown/knockout RNA-Seq assay for INO80D is not avaliable on ENCORE database.