CNNM4

General Information

Gene Name       : CNNM4
Gene ID             : ENSG00000158158.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: CNNM4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CNNM4ENSG00000158158.118.638.588.61ENCSR000AEF
HepG2CNNM4ENSG00000158158.118.256.827.54ENCSR985KAT
K562CNNM4ENSG00000158158.113.913.873.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CNNM4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CNNM4 RNA is bound by 12 proteins.  







eCLIP assay for CNNM4 is not avaliable on ENCORE database.





12 proteins are bound to CNNM4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr29747747297477573+3'-UTR3.384573.18141HepG2FUBP3
chr29747666097476740+3'-UTR5.319489.31998HepG2LIN28B
chr29742663997426721+5'-UTR4.111103.84644HepG2NCBP2
chr29742665197426761+5'-UTR,CDS3.482537.49943HepG2DDX3X
chr29742757897427634+CDS4.404145.16052K562RBM15
chr29746569497465727+intron-Distal6.5443118.94406K562AGGF1
chr29743800597438115+intron-Distal5.390337.48584HepG2HNRNPL
chr29746789297468054+intron-Distal5.159087.26171HepG2GTF2F1
chr29746703297467077+intron-Distal4.410054.74920HepG2AGGF1
chr29743791497437985+intron-Distal5.9908112.00098K562AGGF1
chr29743789197437951+intron-Distal4.300384.50052K562HNRNPL
chr29743869597438917+intron-Distal6.8237630.87609K562HNRNPL
chr29746762597467724+intron-Distal6.0901471.12907K562AGGF1
chr29746680897466842+intron-Distal6.1385431.10065K562AGGF1
chr29746674197466794+intron-Distal7.2174833.73862K562AGGF1
chr29746798697468065+intron-Distal4.272864.53578K562AKAP8L
chr29747220097472298+intron-Distal4.797396.09580K562HNRNPL
chr29746679497466902+intron-Distal5.0787428.58696K562HNRNPL
chr29746611397466167+intron-Distal5.3883211.40824K562HNRNPL
chr29746575597465792+intron-Distal5.2064711.18403K562HNRNPL
chr29743802197438091+intron-Distal3.525104.25660K562HNRNPL
chr29746694897467009+intron-Distal5.6698515.61274K562HNRNPL
chr29746798497468048+intron-Distal3.974093.43253K562YBX3
chr29746551897465605+intron-Distal6.2924423.72475K562HNRNPL
chr29746801197468046+intron-Distal7.30090120.06413K562AGGF1
chr29746787597467957+intron-Distal6.2214134.64706HepG2HNRNPL
chr29746810397468151+intron-Distal6.0729427.40181K562AGGF1
chr29746795797468000+intron-Distal5.9916830.77492HepG2HNRNPL
chr29746701697467085+intron-Distal8.1899971.12675K562AGGF1
chr29746568397465734+intron-Distal6.1724622.42497K562HNRNPL
chr29746783097467882+intron-Distal5.6855039.60974K562AGGF1
chr29746831997468351+intron-Distal5.1292410.48239K562HNRNPL
chr29746764897467696+intron-Distal4.341008.89446K562HNRNPL
chr29746668197466737+intron-Distal5.8235117.12883K562HNRNPL
chr29746750397467564+intron-Distal5.7467615.83961K562HNRNPL
chr29746800097468091+intron-Distal6.9900631.95390HepG2HNRNPL
chr29743867897438790+intron-Distal5.8588253.46840K562AGGF1
chr29746561197465683+intron-Distal6.6842631.58770K562HNRNPL
chr29746789697468053+intron-Distal8.0554972.70703K562HNRNPL
chr29746804697468090+intron-Distal7.7633948.81300K562AGGF1
chr29746750597467571+intron-Distal4.506787.41599HepG2HNRNPL
chr29743854897438635+intron-Distal4.8796126.06858K562AGGF1
chr29746627697466335+intron-Distal4.8600316.99581K562HNRNPL
chr29746793797468011+intron-Distal7.42021400.00000K562AGGF1
chr29743868197438794+intron-Distal5.0069911.95802HepG2HNRNPL
chr29746791297468008+intron-Distal4.9264420.42602HepG2AGGF1
chr29746764097467731+intron-Distal5.797529.61473HepG2AGGF1
chr29746800897468092+intron-Distal4.3170314.96305HepG2AGGF1
chr29746712597467181+intron-Distal5.7220215.12797K562HNRNPL
chr29746789997468017+intron-Distal4.851804.24247HepG2CDC40
chr29746818297468246+intron-Distal5.462616.34129HepG2HNRNPL
chr29746805397468083+intron-Distal5.6566214.23411K562HNRNPL
chr29746818297468242+intron-Distal5.4574023.83897K562HNRNPL
chr29746673797466794+intron-Distal4.1248516.14058K562HNRNPL
chr29746561897465716+intron-Distal4.602614.84986K562GTF2F1
chr29746809597468162+intron-Distal5.8302816.23189K562HNRNPL
chr29743798597438067+intron-Distal5.6663420.96201K562AGGF1
chr29746791697467937+intron-Distal6.5468553.41120K562AGGF1
chr29746792297468046+intron-Distal3.906454.87041K562GTF2F1
chr29746793597468052+intron-Distal6.3003210.69221HepG2XPO5
chr29746858297468629+intron-Distal4.3920511.84085K562HNRNPL
chr29743886897438961+intron-Distal6.3108612.00098K562AGGF1
chr29746819097468235+intron-Distal5.0866630.96900K562AGGF1
chr29746708597467129+intron-Distal7.4383035.77851K562AGGF1
chr29746712797467205+intron-Distal4.0026010.84936HepG2AGGF1
chr29746581897465892+intron-Distal4.9249217.18902K562HNRNPL
chr29746788297467916+intron-Distal6.0525051.62400K562AGGF1
chr29746763597467685+intron-Distal4.9963011.95802HepG2HNRNPL
chr29743773897437788+intron-Distal4.145603.80299K562HNRNPL
chr29743881297438869+intron-Distal4.709186.92541HepG2HNRNPL
chr29743880997438868+intron-Distal6.7205221.73777K562AGGF1
chr29746742997467518+intron-Distal5.471079.87527HepG2AGGF1
chr29743768497437706+intron-Distal4.826155.18780K562AGGF1
chr29746714097467197+intron-Distal4.6454111.69060HepG2HNRNPL
chr29743795497438076+intron-Distal4.840946.95426HepG2AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CNNM4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CNNM4 is not available on ENCORE database.

  • 92 RBPs can affect the levels of CNNM4.  








The Knockdown/knockout RNA-Seq assay for CNNM4 is not available on ENCORE database.





92 RBPs can affect the gene expression of CNNM4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CNNM4ENSG00000158158.7590.46700815.59080-0.466003.221902.20400HepG2ABCF1
CNNM4ENSG00000158158.7689.89400942.67900-0.450402.728302.19980HepG2AKAP1
CNNM4ENSG00000158158.7479.26810779.94680-0.702506.261105.10140HepG2ASCC1
CNNM4ENSG00000158158.7278.34390428.83320-0.623503.484202.47940HepG2BCLAF1
CNNM4ENSG00000158158.7451.34910741.01640-0.715306.372805.23210HepG2CIRBP
CNNM4ENSG00000158158.7274.32800599.74300-1.1284021.0086019.55720HepG2CKAP4
CNNM4ENSG00000158158.7331.54580549.17620-0.728103.981503.05850HepG2CNOT7
CNNM4ENSG00000158158.7132.66950304.84500-1.200209.653607.84360HepG2CSTF2
CNNM4ENSG00000158158.7363.67580475.18240-0.385802.126601.52330HepG2DDX21
CNNM4ENSG00000158158.7690.94450902.92740-0.386002.382401.79720HepG2DDX3X
CNNM4ENSG00000158158.7386.11140674.41330-0.804608.068306.43420HepG2DDX5
CNNM4ENSG00000158158.7357.98370501.28060-0.485704.629103.82160HepG2DNAJC2
CNNM4ENSG00000158158.7400.44140593.07870-0.566603.826102.75520HepG2EEF2
CNNM4ENSG00000158158.7328.19620481.43690-0.552803.096102.14430HepG2EIF3D
CNNM4ENSG00000158158.7565.44370823.90820-0.543103.791003.04770HepG2EIF4A3
CNNM4ENSG00000158158.7491.08710934.27940-0.9279018.0394016.72550HepG2ETF1
CNNM4ENSG00000158158.7222.46100452.88170-1.0256010.682208.68690HepG2FASTKD2
CNNM4ENSG00000158158.7574.55490823.50140-0.519303.376802.53350HepG2FIP1L1
CNNM4ENSG00000158158.7268.54580403.88760-0.588802.881301.58520HepG2FKBP4
CNNM4ENSG00000158158.7527.33220831.58890-0.657205.754204.77960HepG2FXR1
CNNM4ENSG00000158158.7459.58990771.26280-0.746906.652605.64190HepG2G3BP1
CNNM4ENSG00000158158.7588.61080819.00060-0.476603.427002.42880HepG2G3BP2
CNNM4ENSG00000158158.7333.85740510.57880-0.612904.455903.66090HepG2HNRNPA1
CNNM4ENSG00000158158.7445.25810567.92880-0.351101.890101.30610HepG2HNRNPC
CNNM4ENSG00000158158.7514.86340781.34200-0.601805.128204.19920HepG2HNRNPK
CNNM4ENSG00000158158.7286.41050564.17370-0.9781015.0051013.68520HepG2HNRNPU
CNNM4ENSG00000158158.7319.88630783.91560-1.2931017.9029016.36070HepG2IGF2BP2
CNNM4ENSG00000158158.7382.36840788.59020-1.044309.895607.91210HepG2KHSRP
CNNM4ENSG00000158158.7572.74350831.88060-0.538503.989803.20270HepG2MAGOH
CNNM4ENSG00000158158.7635.95300856.15200-0.428902.709102.08200HepG2NCBP2
CNNM4ENSG00000158158.7595.32740736.83850-0.307702.104201.43690HepG2NOL12
CNNM4ENSG00000158158.7306.60330558.43010-0.8650011.457609.92650HepG2PARN
CNNM4ENSG00000158158.7600.44190767.74780-0.354603.261102.61210HepG2PCBP1
CNNM4ENSG00000158158.7624.87890781.21270-0.322102.940902.38010HepG2PTBP1
CNNM4ENSG00000158158.7503.88140746.70340-0.567507.580706.69970HepG2PUM1
CNNM4ENSG00000158158.7503.19980611.09050-0.280302.040401.49290HepG2PUS1
CNNM4ENSG00000158158.7616.72170846.07120-0.456204.335303.57860HepG2QKI
CNNM4ENSG00000158158.7464.99880780.89200-0.747909.832208.99150HepG2RBM22
CNNM4ENSG00000158158.7614.95890767.86460-0.320402.124201.52730HepG2RBM25
CNNM4ENSG00000158158.7409.34790568.33650-0.473402.893101.87790HepG2RBM27
CNNM4ENSG00000158158.7702.81070869.41420-0.306902.588702.06210HepG2NELFE
CNNM4ENSG00000158158.7630.99370809.74220-0.359803.275302.61200HepG2RECQL
CNNM4ENSG00000158158.7214.27170370.27880-0.789204.610503.62570HepG2RRP9
CNNM4ENSG00000158158.7674.04000502.419100.423804.296603.52570HepG2SAFB2
CNNM4ENSG00000158158.7454.70390717.75350-0.658604.589503.71010HepG2SF3A3
CNNM4ENSG00000158158.7846.20030473.850500.836508.973207.77180HepG2SF3B1
CNNM4ENSG00000158158.7500.88170813.34210-0.699409.859908.84500HepG2SF3B4
CNNM4ENSG00000158158.7402.22390585.90140-0.542706.170505.26940HepG2SMN1
CNNM4ENSG00000158158.7707.90350848.95350-0.262102.090701.66370HepG2SRSF1
CNNM4ENSG00000158158.7511.85390690.66930-0.432304.391403.72600HepG2SRSF9
CNNM4ENSG00000158158.7589.79530765.80860-0.376803.219802.67620HepG2SSB
CNNM4ENSG00000158158.7661.61150789.84330-0.255601.981701.43830HepG2SUCLG1
CNNM4ENSG00000158158.7493.78800763.07390-0.627907.512406.66400HepG2TAF15
CNNM4ENSG00000158158.7213.59450323.76850-0.600103.237002.16330HepG2TFIP11
CNNM4ENSG00000158158.71061.19720704.327600.591305.227504.37920HepG2U2AF1
CNNM4ENSG00000158158.7707.78900354.772300.996302.897001.88450HepG2U2AF2
CNNM4ENSG00000158158.7188.36430285.34980-0.599203.028502.23640HepG2UCHL5
CNNM4ENSG00000158158.7449.36560636.53990-0.502405.338904.41970HepG2UPF1
CNNM4ENSG00000158158.7200.65350442.32030-1.140408.054506.29620HepG2UPF2
CNNM4ENSG00000158158.7385.38060561.60400-0.543302.837201.76750HepG2XRCC6
CNNM4ENSG00000158158.7317.34620475.50620-0.583403.416702.61590HepG2XRN2
CNNM4ENSG00000158158.7528.44230700.06880-0.405804.356903.71190HepG2ZNF622
CNNM4ENSG00000158158.71202.51580525.766901.1935034.3720032.44190K562AGGF1
CNNM4ENSG00000158158.7496.17900357.421400.473103.963902.12690K562AKAP1
CNNM4ENSG00000158158.7780.36460577.803100.433503.710402.53310K562AKAP8
CNNM4ENSG00000158158.71356.35130547.100201.3098017.9151015.96830K562AKAP8L
CNNM4ENSG00000158158.7296.38580539.89530-0.865208.107605.89660K562APOBEC3C
CNNM4ENSG00000158158.7616.09270413.103000.576504.384903.67800K562AQR
CNNM4ENSG00000158158.7559.50320362.875800.624602.912101.81580K562CNOT7
CNNM4ENSG00000158158.7391.29210287.804900.443102.603601.84170K562CPSF6
CNNM4ENSG00000158158.7472.42100362.202800.383202.420501.44890K562DDX3X
CNNM4ENSG00000158158.7397.65790497.36060-0.322802.156901.57000K562DDX47
CNNM4ENSG00000158158.7460.16960340.823700.433003.298502.01420K562EIF4B
CNNM4ENSG00000158158.7513.09360330.350200.635103.772902.22970K562EWSR1
CNNM4ENSG00000158158.7419.22150292.844000.517502.971602.08370K562FMR1
CNNM4ENSG00000158158.7523.66520357.024500.552505.173702.55430K562FUBP3
CNNM4ENSG00000158158.7261.85330393.56100-0.587803.720703.03430K562FXR1
CNNM4ENSG00000158158.7163.82930286.56960-0.806704.303503.37880K562G3BP2
CNNM4ENSG00000158158.7663.04010353.797900.906104.182202.58840K562HNRNPA2B1
CNNM4ENSG00000158158.7252.90600357.86320-0.500802.475001.31420K562HNRNPK
CNNM4ENSG00000158158.7361.84160478.36580-0.402802.814601.91300K562HNRNPU
CNNM4ENSG00000158158.71067.54470580.554200.878708.710807.03730K562KIF1C
CNNM4ENSG00000158158.7937.46210650.375100.527404.760103.50260K562MBNL1
CNNM4ENSG00000158158.7910.79640455.870800.998404.122902.98740K562NAA15
CNNM4ENSG00000158158.7547.72910439.450500.317702.377601.68150K562NSUN2
CNNM4ENSG00000158158.7658.92200309.348501.090805.688504.12040K562PABPN1
CNNM4ENSG00000158158.7703.13250367.658500.935304.091502.18550K562PPP1R8
CNNM4ENSG00000158158.7259.80180365.91410-0.494103.146002.44250K562PTBP1
CNNM4ENSG00000158158.7995.50340542.459300.875809.766708.79490K562PUS1
CNNM4ENSG00000158158.71318.75000528.639301.318706.719505.82170K562RBM15
CNNM4ENSG00000158158.7739.28900380.566400.957903.518401.73520K562RBM39
CNNM4ENSG00000158158.7264.42950375.00040-0.504002.848801.74990K562SAFB
CNNM4ENSG00000158158.7540.77040330.570400.710003.753401.91070K562SBDS
CNNM4ENSG00000158158.7645.84780282.835301.191105.389303.53260K562SF1
CNNM4ENSG00000158158.7669.36220344.703000.957303.396101.89810K562SFPQ
CNNM4ENSG00000158158.7595.88300324.930600.874803.548502.09570K562SNRNP200
CNNM4ENSG00000158158.7761.94200388.591200.971304.157302.25680K562SUPT6H
CNNM4ENSG00000158158.7453.34290316.259900.519403.250302.20620K562TRIM56
CNNM4ENSG00000158158.7257.63090465.95830-0.854909.947408.69260K562UPF1
CNNM4ENSG00000158158.71098.68050550.112500.997903.848802.23710K562UTP18
CNNM4ENSG00000158158.7762.75500382.310500.996404.652702.33940K562YTHDC2
CNNM4ENSG00000158158.7616.47190465.304000.405802.474401.66620K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CNNM4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CNNM4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CNNM4 is not avaliable on ENCORE database.