CIB1

General Information

Gene Name       : CIB1
Gene ID             : ENSG00000185043.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CIB1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CIB1ENSG00000185043.1126.9356.5041.72ENCSR000AEF
HepG2CIB1ENSG00000185043.1158.5236.2947.41ENCSR985KAT
K562CIB1ENSG00000185043.1199.5872.0485.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CIB1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CIB1 RNA is bound by 15 proteins.  







eCLIP assay for CIB1 is not avaliable on ENCORE database.





15 proteins are bound to CIB1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr159077358890773668-3'-UTR,intron-Distal3.045373.53911K562UPF1
chr159077361890773677-3'-UTR,intron-Distal5.189777.86232HepG2LARP4
chr159077360790773679-3'-UTR,intron-Distal3.996417.66579K562PABPC4
chr159077367790773733-3'-UTR,CDS,intron-Distal3.745596.34803HepG2LARP4
chr159077349390773556-3'-UTR,intron-Distal3.680703.95400K562UPF1
chr159077707290777148-5'-UTR,CDS,intron-Distal4.187028.43072HepG2DDX3X
chr159077710490777163-5'-UTR,CDS,intron-Distal3.571613.30833K562EIF3G
chr159077706790777153-5'-UTR,CDS,intron-Distal3.1752112.46362K562DDX3X
chr159077708490777158-5'-UTR,CDS,intron-Distal5.275115.44904HepG2RPS3
chr159077539790775458-CDS,intron-Distal,intron-Proximal5.048068.11807HepG2PRPF8
chr159077469790774799-CDS,intron-Distal,intron-Proximal5.3373819.65719K562AQR
chr159077686590776937-CDS,intron-Distal,intron-Proximal3.271324.71929HepG2PRPF8
chr159077554690775559-CDS,intron-Distal3.294764.84203K562DDX3X
chr159077690890776934-CDS,intron-Distal3.335158.60695K562DDX3X
chr159077419390774237-CDS,intron-Distal,intron-Proximal3.030337.54748K562YBX3
chr159077538890775459-CDS,intron-Distal,intron-Proximal6.9645425.97718K562AQR
chr159077432290774410-CDS,intron-Distal,intron-Proximal3.203634.24058K562GRWD1
chr159077461190774682-CDS,intron-Distal3.421056.09767K562UCHL5
chr159077425690774333-CDS,intron-Distal,intron-Proximal3.626813.84119K562EFTUD2
chr159077706890777110-CDS,intron-Distal3.850513.41711K562DROSHA
chr159077690090776908-CDS,intron-Distal,intron-Proximal3.130694.39112K562DDX3X
chr159077417290774193-CDS,intron-Distal3.4633012.20820K562YBX3
chr159077474390774802-intron-Distal,intron-Proximal4.159485.68247K562SF3B4
chr159077628990776358-intron-Distal3.639625.17284K562TIA1
chr159077529090775343-intron-Distal3.013723.40058K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CIB1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CIB1 is not available on ENCORE database.

  • 98 RBPs can affect the levels of CIB1.  








The Knockdown/knockout RNA-Seq assay for CIB1 is not available on ENCORE database.





98 RBPs can affect the gene expression of CIB1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CIB1ENSG00000185043.6816.73750577.653800.499605.003204.23260HepG2ACO1
CIB1ENSG00000185043.61115.66180757.644800.558203.605103.00790HepG2AKAP1
CIB1ENSG00000185043.6572.32170332.725700.782406.078704.56750HepG2AKAP8
CIB1ENSG00000185043.6847.34250580.284700.546107.096305.93090HepG2AKAP8L
CIB1ENSG00000185043.6935.35280626.842700.577304.697703.68740HepG2ASCC1
CIB1ENSG00000185043.6752.56080530.322200.504802.416901.54220HepG2BCCIP
CIB1ENSG00000185043.6438.05480322.702400.440802.132501.44940HepG2CALR
CIB1ENSG00000185043.6916.68100595.558200.622105.455904.39090HepG2CIRBP
CIB1ENSG00000185043.6394.13440577.42830-0.551006.160205.23940HepG2CKAP4
CIB1ENSG00000185043.6184.05580327.46640-0.831206.206004.69700HepG2CSTF2
CIB1ENSG00000185043.61108.20650728.491100.605109.875108.80290HepG2CELF1
CIB1ENSG00000185043.6560.24280409.507100.452103.515902.21240HepG2DDX1
CIB1ENSG00000185043.6568.59650431.435500.398202.477801.83250HepG2DDX21
CIB1ENSG00000185043.6307.05990422.51180-0.460502.672901.77670HepG2DDX24
CIB1ENSG00000185043.61144.93970725.670400.657806.094405.20080HepG2DDX3X
CIB1ENSG00000185043.6826.41240521.456900.664204.177603.24890HepG2DDX55
CIB1ENSG00000185043.6218.46690373.35520-0.773103.374202.29800HepG2DDX59
CIB1ENSG00000185043.61323.03780623.591901.0851014.0239012.76820HepG2DDX6
CIB1ENSG00000185043.6510.76440401.562000.346902.287301.64280HepG2DNAJC21
CIB1ENSG00000185043.6509.07290397.935900.355202.555201.92400HepG2DNAJC2
CIB1ENSG00000185043.6571.23770388.991500.554303.404702.39050HepG2EEF2
CIB1ENSG00000185043.6843.75590599.249700.493603.452102.79350HepG2EIF2S1
CIB1ENSG00000185043.6355.63940644.88640-0.858606.070205.08060HepG2EIF4B
CIB1ENSG00000185043.6369.06030502.40200-0.445002.801501.70120HepG2ESF1
CIB1ENSG00000185043.6674.250901083.15950-0.683907.061006.17510HepG2ETF1
CIB1ENSG00000185043.6306.65060433.46030-0.499303.135002.30170HepG2FUBP3
CIB1ENSG00000185043.6917.40880668.392600.456803.213602.46960HepG2FXR1
CIB1ENSG00000185043.6872.05120719.826100.276702.515601.61980HepG2HNRNPA2B1
CIB1ENSG00000185043.6341.53960450.91500-0.400802.064201.45490HepG2HNRNPC
CIB1ENSG00000185043.6417.58640571.47160-0.452603.886403.05000HepG2HNRNPF
CIB1ENSG00000185043.6376.67290633.79950-0.750705.255103.83240HepG2KHSRP
CIB1ENSG00000185043.6959.37220668.627400.520803.944203.16140HepG2MAGOH
CIB1ENSG00000185043.6663.81770473.901300.486103.447902.54520HepG2MSI2
CIB1ENSG00000185043.6226.46360315.37260-0.477802.010401.36800HepG2NSUN2
CIB1ENSG00000185043.6892.98640370.855001.2677010.846809.06030HepG2PABPC1
CIB1ENSG00000185043.6216.95670369.59890-0.768606.854205.69870HepG2PRPF4
CIB1ENSG00000185043.61032.52950741.374100.477804.780304.02270HepG2PUF60
CIB1ENSG00000185043.6284.71660707.67550-1.3136023.1174021.57000HepG2QKI
CIB1ENSG00000185043.6402.11880642.25590-0.675506.633505.62850HepG2RBM25
CIB1ENSG00000185043.6505.64000677.26970-0.421603.799403.09240HepG2RECQL
CIB1ENSG00000185043.6457.88950308.320900.570503.411602.36330HepG2SERBP1
CIB1ENSG00000185043.6147.15790352.04520-1.2584010.912109.59730HepG2SF3B1
CIB1ENSG00000185043.6557.02500680.29830-0.288402.085801.56130HepG2SF3B4
CIB1ENSG00000185043.6590.15500348.532100.759702.806001.84250HepG2SMNDC1
CIB1ENSG00000185043.6637.833001022.48070-0.6808012.5769011.71400HepG2SRFBP1
CIB1ENSG00000185043.6231.40540378.80340-0.711003.763202.57730HepG2SRSF3
CIB1ENSG00000185043.6884.59880732.048200.273002.538201.93390HepG2SRSF5
CIB1ENSG00000185043.6410.37200561.44560-0.452203.790002.99470HepG2SRSF7
CIB1ENSG00000185043.6408.45510638.23410-0.643906.915806.09920HepG2TAF15
CIB1ENSG00000185043.6714.14220435.353100.713903.278502.74120HepG2TIAL1
CIB1ENSG00000185043.6787.27530439.137700.8421014.7212013.56750HepG2TRIM56
CIB1ENSG00000185043.6577.86130384.617800.587206.435405.44290HepG2UPF1
CIB1ENSG00000185043.6221.96870364.74960-0.716606.388905.43740HepG2ZC3H8
CIB1ENSG00000185043.61214.83110423.008001.5219060.8200059.13590HepG2ZNF622
CIB1ENSG00000185043.62253.059401037.890201.1181042.4687040.29080K562AGGF1
CIB1ENSG00000185043.61746.104501140.576900.614305.277403.81470K562AKAP8
CIB1ENSG00000185043.62219.583801079.994501.0392022.9237020.69880K562AKAP8L
CIB1ENSG00000185043.61116.627101822.77780-0.707008.906707.95120K562AQR
CIB1ENSG00000185043.61680.461501133.217300.568305.787904.40650K562ATP5C1
CIB1ENSG00000185043.61602.594501240.261700.369702.394301.31230K562CCDC124
CIB1ENSG00000185043.61758.317801056.757800.7345010.122307.89290K562CIRBP
CIB1ENSG00000185043.61306.635201040.215900.328903.435502.19570K562CPEB4
CIB1ENSG00000185043.62000.300902518.97520-0.332602.501201.57460K562CELF1
CIB1ENSG00000185043.6788.780801076.29750-0.448405.782304.89130K562DDX47
CIB1ENSG00000185043.61496.940401186.554900.335103.692602.12000K562DDX6
CIB1ENSG00000185043.61442.006301119.810300.364704.277803.41230K562EIF2S2
CIB1ENSG00000185043.6389.80050632.11110-0.697403.717702.53290K562EIF3A
CIB1ENSG00000185043.6841.975301222.69760-0.538205.703004.52980K562EIF4A3
CIB1ENSG00000185043.6853.28650599.798300.508504.480403.38180K562FIP1L1
CIB1ENSG00000185043.6454.01190807.33550-0.830408.453106.31590K562FKBP4
CIB1ENSG00000185043.6782.428401271.55240-0.7006012.7208011.51950K562FXR1
CIB1ENSG00000185043.6252.99980628.21490-1.3121013.8463012.00540K562G3BP2
CIB1ENSG00000185043.6668.29260487.773600.454203.260902.40100K562GPKOW
CIB1ENSG00000185043.6904.482901437.09580-0.668008.983007.15370K562HNRNPA1
CIB1ENSG00000185043.6549.06870929.55640-0.759609.535208.48030K562HNRNPC
CIB1ENSG00000185043.61117.559401591.58970-0.510105.752504.45250K562HNRNPU
CIB1ENSG00000185043.61539.63080986.721400.641803.684402.43710K562IGF2BP2
CIB1ENSG00000185043.61463.238701003.331700.544305.813403.97750K562IGF2BP3
CIB1ENSG00000185043.6428.93020627.46710-0.548804.107502.28950K562KHDRBS1
CIB1ENSG00000185043.61643.349901146.064400.519906.705605.29250K562KIF1C
CIB1ENSG00000185043.61652.797101097.130300.591104.783403.25200K562MAK16
CIB1ENSG00000185043.61674.802701283.892700.383403.906802.79550K562MBNL1
CIB1ENSG00000185043.6723.04140945.99400-0.387804.191603.21410K562MTPAP
CIB1ENSG00000185043.61359.49460899.922800.595104.618403.38680K562NAA15
CIB1ENSG00000185043.61077.13270767.392500.489103.682002.14320K562NONO
CIB1ENSG00000185043.6873.163301051.01230-0.267502.519801.80410K562NSUN2
CIB1ENSG00000185043.61531.14760740.311901.048306.432004.73650K562PABPN1
CIB1ENSG00000185043.6535.592701003.32510-0.9056010.405008.79960K562PCBP3
CIB1ENSG00000185043.6478.88240769.60360-0.684407.851406.52620K562POLR2G
CIB1ENSG00000185043.61086.39050680.968200.673804.759803.63970K562PPIG
CIB1ENSG00000185043.61797.577702234.58990-0.314002.687201.88200K562PUF60
CIB1ENSG00000185043.62226.372801070.895501.055807.888007.01850K562PUS1
CIB1ENSG00000185043.61885.068601043.561200.8530013.5974012.27670K562RBM15
CIB1ENSG00000185043.6977.46560760.551800.361902.926101.90570K562RCC2
CIB1ENSG00000185043.6519.46050685.67560-0.400502.735701.66110K562SAFB
CIB1ENSG00000185043.6463.54370708.93560-0.612905.312303.30050K562SDAD1
CIB1ENSG00000185043.61368.25020676.956201.015105.036903.25640K562SF1
CIB1ENSG00000185043.6518.48910652.97450-0.332702.197001.43650K562SF3B4
CIB1ENSG00000185043.6522.65280684.47670-0.389102.555101.34480K562SLBP
CIB1ENSG00000185043.61340.07330932.480800.523104.882503.41410K562SRSF5
CIB1ENSG00000185043.6623.78610876.01740-0.489905.124202.98880K562SRSF9
CIB1ENSG00000185043.6568.49730771.90610-0.441303.886202.91220K562SYNCRIP
CIB1ENSG00000185043.6478.84210654.58340-0.451003.304401.55570K562TBRG4
CIB1ENSG00000185043.61244.85300963.568400.369402.761201.94450K562TIA1
CIB1ENSG00000185043.61245.47970945.968700.396702.795001.69650K562TRA2A
CIB1ENSG00000185043.6432.63750608.65370-0.492502.692401.61730K562U2AF1
CIB1ENSG00000185043.6393.00770628.70190-0.677807.282105.98590K562U2AF2
CIB1ENSG00000185043.61747.149301085.941100.686003.773602.18830K562UTP18
CIB1ENSG00000185043.6740.85890991.65730-0.420605.436204.29010K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CIB1 is not available on ENCORE database.





12 RBPs can affect the splicing of CIB1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECIB1ENSG00000185043.6chr15-907754509077555990774588907747399077690090776935-0.082000.002020.03690excludedK562SF3B4
SECIB1ENSG00000185043.6chr15-907754509077555990774588907747399077690090776935-0.054000.001480.02856excludedHepG2U2AF1
SECIB1ENSG00000185043.6chr15-907754509077567990774588907747399077690090776935-0.059000.000700.00909excludedK562AQR
SECIB1ENSG00000185043.6chr15-907749159077502090774588907747399077690090776935-0.390000.000060.04119excludedK562ABCF1
SECIB1ENSG00000185043.6chr15-907754509077555990774588907747399077690090776935-0.066000.000590.08551excludedK562SRSF7
SECIB1ENSG00000185043.6chr15-907754509077567990774588907747399077690090776935-0.080000.000320.01853excludedHepG2SF3B4
SECIB1ENSG00000185043.6chr15-907754509077567990774588907747399077690090776935-0.081000.000040.01100excludedK562RBM22
SECIB1ENSG00000185043.6chr15-907754509077567990774588907747399077690090776935-0.054000.002230.06900excludedK562TARDBP
SECIB1ENSG00000185043.6chr15-907754509077567990774588907747399077690090776935-0.074000.000270.01701excludedK562HNRNPK
A3SSCIB1ENSG00000185043.6chr15-9077545090775679907754509077555990776900907769350.621000.000000.00000longerK562U2AF2
A3SSCIB1ENSG00000185043.6chr15-9077545090775679907754509077555990776900907769350.358000.000000.00001longerHepG2U2AF2
A3SSCIB1ENSG00000185043.6chr15-9077545090775679907754509077555990776900907769350.113000.000000.00000longerK562AQR
A3SSCIB1ENSG00000185043.6chr15-9077545090775679907754509077555990776900907769350.331000.000000.00000longerHepG2U2AF1
A3SSCIB1ENSG00000185043.6chr15-9077545090775679907754509077555990776900907769350.464000.000000.00000longerK562U2AF1
MXECIB1ENSG00000185043.6chr15-90775450907755599077690090776935907745889077473990777066907772790.058000.001050.066111includedHepG2NOL12
MXECIB1ENSG00000185043.6chr15-90775450907755599077690090776935907745889077473990777066907772790.151000.000040.003891includedHepG2DDX3X
MXECIB1ENSG00000185043.6chr15-90775450907755599077690090776935907745889077473990777066907772790.075000.000200.011661includedHepG2HNRNPL

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CIB1 is not avaliable on ENCORE database.