CD97

General Information

Gene Name       : CD97
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CD97)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CD97 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CD97 RNA is bound by 15 proteins.  







eCLIP assay for CD97 is not avaliable on ENCORE database.





15 proteins are bound to CD97 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191451915814519222+3'-UTR3.796625.24353K562UPF1
chr191451907014519208+3'-UTR4.453314.44583HepG2UPF1
chr191449208914492181+5'-UTR,intron-Distal4.622444.85626K562TARDBP
chr191451344714513501+CDS3.162494.22960K562SND1
chr191451340714513447+CDS,intron-Proximal3.275273.14823K562SND1
chr191451660214516664+CDS3.197694.50206K562SND1
chr191451222714512299+CDS3.420895.59577K562SND1
chr191449234814492458+CDS,intron-Distal,intron-Proximal3.415169.07229K562PRPF8
chr191450179314501891+CDS4.521034.42734K562UCHL5
chr191451767914517733+CDS,intron-Proximal4.442174.77252K562ZNF622
chr191451714214517173+CDS,intron-Proximal4.515483.60906K562SND1
chr191451723214517298+CDS5.401738.52178K562SND1
chr191449959114499631+CDS,intron-Proximal3.035653.69775K562YBX3
chr191451537114515408+CDS,intron-Proximal4.181375.47926K562AQR
chr191451887214518918+CDS,intron-Proximal4.164683.28461K562BUD13
chr191451340814513676+CDS,intron-Proximal3.471744.88910K562ZNF800
chr191450895014508991+CDS,intron-Proximal4.672064.86944K562AQR
chr191451338914513447+CDS,intron-Proximal3.579723.75245K562BUD13
chr191451253714512572+CDS3.860233.79230K562SND1
chr191451717914517232+CDS4.666814.24959K562SND1
chr191451249214512575+CDS,intron-Proximal4.406703.19000HepG2SND1
chr191451519414515355+CDS,intron-Proximal4.043354.12428HepG2SND1
chr191451252314512564+CDS4.098873.77023K562ZNF622
chr191450671414506808+intron-Distal4.234757.63628K562SLTM
chr191449617214496235+intron-Distal5.3560814.54239K562PTBP1
chr191450492314504991+intron-Distal4.041155.33662K562SLTM
chr191449487714495147+intron-Distal3.410936.84709K562ILF3
chr191450097314501071+intron-Distal4.031604.67702K562GTF2F1
chr191450020014500295+intron-Distal5.496415.24810K562GTF2F1
chr191449623514496291+intron-Distal4.5419216.70440K562PTBP1
chr191450439114504506+intron-Distal3.127695.38642K562SLTM
chr191450019314500285+intron-Distal4.582584.46951K562FAM120A
chr191449550814495541+intron-Distal5.246996.40067K562PTBP1
chr191449982114499879+intron-Distal4.535144.65580K562GTF2F1
chr191451779114517863+intron-Proximal3.430983.76553K562PRPF8
chr191449963014499722+intron-Proximal3.020403.95292K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CD97 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CD97 is not available on ENCORE database.

  • 99 RBPs can affect the levels of CD97.  








The Knockdown/knockout RNA-Seq assay for CD97 is not available on ENCORE database.





99 RBPs can affect the gene expression of CD97 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CD97ENSG00000123146.15254.59610143.684200.825206.015805.18780HepG2ACO1
CD97ENSG00000123146.15498.8977090.424202.4639031.2218029.67790HepG2AKAP1
CD97ENSG00000123146.15160.6179074.815701.102104.970103.93130HepG2ASCC1
CD97ENSG00000123146.15159.98640227.15220-0.505702.531001.86960HepG2AUH
CD97ENSG00000123146.15198.85650117.549000.758402.163401.33850HepG2BCCIP
CD97ENSG00000123146.1567.19890143.82680-1.097804.726503.97030HepG2BOP1
CD97ENSG00000123146.15349.97970160.952401.1205011.9093010.75450HepG2CELF1
CD97ENSG00000123146.1542.54170111.64650-1.392005.829004.88480HepG2DDX21
CD97ENSG00000123146.1559.14280109.25450-0.885402.877301.94370HepG2DDX24
CD97ENSG00000123146.15340.18350115.591301.557205.156304.14010HepG2DDX55
CD97ENSG00000123146.15176.6312074.416801.246906.101705.21290HepG2DDX6
CD97ENSG00000123146.15147.3055071.524901.042204.194303.47240HepG2EIF2S1
CD97ENSG00000123146.1577.52500144.57940-0.899103.589002.35180HepG2ESF1
CD97ENSG00000123146.15186.43760260.81460-0.484302.536901.95730HepG2ETF1
CD97ENSG00000123146.15355.81390168.549601.077806.787305.63720HepG2FIP1L1
CD97ENSG00000123146.15175.70110110.170200.673302.385901.34340HepG2FUS
CD97ENSG00000123146.15201.0442079.764901.333607.795306.67950HepG2FXR1
CD97ENSG00000123146.1544.70520108.71200-1.282004.547503.74690HepG2HNRNPA1
CD97ENSG00000123146.15147.1854074.939200.973703.740702.93790HepG2HNRNPK
CD97ENSG00000123146.1555.86060142.83890-1.354505.953305.06650HepG2HNRNPLL
CD97ENSG00000123146.15174.55610122.701200.508402.344801.66230HepG2ILF2
CD97ENSG00000123146.15204.83950105.655700.955003.235602.09700HepG2METAP2
CD97ENSG00000123146.1577.59100136.38130-0.813702.915902.08660HepG2MSI2
CD97ENSG00000123146.1576.34730145.68090-0.932202.779201.80900HepG2MTPAP
CD97ENSG00000123146.1569.56110114.52750-0.719302.439401.30190HepG2NAA15
CD97ENSG00000123146.15239.61170106.224801.173504.346602.95760HepG2NONO
CD97ENSG00000123146.1540.11050126.65520-1.658906.692205.55540HepG2NSUN2
CD97ENSG00000123146.15166.6723081.355201.034605.935205.09990HepG2PCBP1
CD97ENSG00000123146.15246.7114082.794301.5751014.9418013.86730HepG2PTBP1
CD97ENSG00000123146.15359.51630173.902401.047709.335608.38150HepG2PUM1
CD97ENSG00000123146.15448.04750173.778001.3663017.3896015.80120HepG2PUM2
CD97ENSG00000123146.1552.6902089.64210-0.766601.868701.34050HepG2QKI
CD97ENSG00000123146.15201.86810100.564401.005203.737602.92270HepG2RAVER1
CD97ENSG00000123146.15364.60010173.163801.0741010.070008.57700HepG2RBM15
CD97ENSG00000123146.15140.6490092.131900.610201.981701.50770HepG2NELFE
CD97ENSG00000123146.15132.3667085.826800.624902.169201.61450HepG2RECQL
CD97ENSG00000123146.15166.7588098.256500.763003.088802.44440HepG2RPS19
CD97ENSG00000123146.15196.1940088.111801.154804.813303.80880HepG2RRP9
CD97ENSG00000123146.15164.6393098.591400.739702.631901.71600HepG2SERBP1
CD97ENSG00000123146.1548.1101096.12370-0.998602.712602.04520HepG2SF3A3
CD97ENSG00000123146.1579.77270141.38130-0.825602.815002.10250HepG2SF3B1
CD97ENSG00000123146.15142.4829086.177500.725302.788002.19410HepG2SF3B4
CD97ENSG00000123146.15216.88350124.750400.797804.658903.86030HepG2SMN1
CD97ENSG00000123146.15211.79350102.861701.041905.700204.29070HepG2SMNDC1
CD97ENSG00000123146.15164.61490246.20660-0.580802.985902.47170HepG2SRFBP1
CD97ENSG00000123146.15141.9553089.959700.658002.460302.00730HepG2SRSF1
CD97ENSG00000123146.15270.05710161.747400.739404.906204.11020HepG2SRSF5
CD97ENSG00000123146.1551.15700213.75700-2.0630019.7769018.67590HepG2SSB
CD97ENSG00000123146.15220.90170125.010700.821304.080002.54290HepG2SSRP1
CD97ENSG00000123146.15273.44900183.955800.571803.310702.64310HepG2SUCLG1
CD97ENSG00000123146.1565.75790122.78770-0.900902.402701.40800HepG2TBRG4
CD97ENSG00000123146.15274.90560117.764901.2229012.1368011.07720HepG2TRIM56
CD97ENSG00000123146.15254.17440169.397700.585302.033501.32150HepG2UBE2L3
CD97ENSG00000123146.1526.7048067.94270-1.347202.845702.07590HepG2UCHL5
CD97ENSG00000123146.1550.6914085.24750-0.749902.070501.45130HepG2UPF1
CD97ENSG00000123146.1560.01320113.24900-0.916102.727602.00760HepG2XRN2
CD97ENSG00000123146.1533.00560123.27720-1.9011010.976909.78990HepG2ZC3H8
CD97ENSG00000123146.1527.6346093.75520-1.762408.011207.20590HepG2ZNF622
CD97ENSG00000123146.15835.876301257.46250-0.589206.350405.52220K562AQR
CD97ENSG00000123146.151048.31960496.877901.077009.810808.11750K562BOP1
CD97ENSG00000123146.15887.60690584.750100.602005.937704.09880K562CIRBP
CD97ENSG00000123146.151338.93670928.715800.527702.637501.60600K562CNOT7
CD97ENSG00000123146.151481.569401111.058200.415105.520003.91390K562CPEB4
CD97ENSG00000123146.15805.21760528.333500.607806.429705.23490K562CPSF6
CD97ENSG00000123146.15804.30650558.312200.526603.908502.80830K562EFTUD2
CD97ENSG00000123146.15988.77780674.971600.550707.782805.72390K562EIF2S1
CD97ENSG00000123146.151995.32270899.761701.1489037.7099035.66710K562EIF2S2
CD97ENSG00000123146.15770.29110578.162400.413803.822702.43100K562EIF4B
CD97ENSG00000123146.15818.78520560.412900.546905.953703.91460K562EWSR1
CD97ENSG00000123146.15808.20220537.548000.588205.149103.97680K562FMR1
CD97ENSG00000123146.15627.77760455.612300.462302.870201.93900K562FTO
CD97ENSG00000123146.15101.34210283.06130-1.4819011.193109.57830K562G3BP2
CD97ENSG00000123146.15838.68790559.761500.583204.472202.62530K562GEMIN5
CD97ENSG00000123146.15854.97180504.436300.761108.795707.37260K562GPKOW
CD97ENSG00000123146.15892.47140641.896200.475402.520501.94750K562HNRNPC
CD97ENSG00000123146.15736.90300573.323300.362002.407801.35620K562HNRNPF
CD97ENSG00000123146.15696.875701078.97790-0.630709.294307.67110K562HNRNPU
CD97ENSG00000123146.151179.09300882.580700.417802.248101.52700K562HSPD1
CD97ENSG00000123146.15869.77210545.880200.672003.306202.14990K562IGF2BP2
CD97ENSG00000123146.15857.43970555.117100.627106.665004.69180K562IGF2BP3
CD97ENSG00000123146.15909.085501154.36340-0.344602.216201.48680K562KIF1C
CD97ENSG00000123146.15593.08480430.705300.461402.180601.36280K562KRR1
CD97ENSG00000123146.15762.72650572.620200.413502.931701.35660K562LSM11
CD97ENSG00000123146.15781.31070573.409300.446203.696702.71630K562MAGOH
CD97ENSG00000123146.15752.52780492.382800.611905.912704.60420K562METAP2
CD97ENSG00000123146.15796.41550993.86420-0.319503.104202.24920K562MTPAP
CD97ENSG00000123146.15644.32560906.42650-0.492402.834601.93910K562NAA15
CD97ENSG00000123146.15991.39990641.132200.628707.236905.28280K562NCBP2
CD97ENSG00000123146.15760.46890550.504800.466002.941001.59310K562NONO
CD97ENSG00000123146.15775.09370575.557600.429302.953002.01380K562PSIP1
CD97ENSG00000123146.151307.86540557.124701.2310021.2516019.48060K562PTBP1
CD97ENSG00000123146.152227.154001694.257700.394405.486103.94240K562PUM1
CD97ENSG00000123146.152134.824701660.287300.362605.406904.04440K562PUM2
CD97ENSG00000123146.15450.13620316.661900.507303.714901.61520K562QKI
CD97ENSG00000123146.15878.59610534.058000.718104.071503.03100K562RBM22
CD97ENSG00000123146.15765.84960520.725600.556404.482702.58390K562RBM34
CD97ENSG00000123146.151005.91230525.268100.9373015.3830013.06610K562RCC2
CD97ENSG00000123146.15754.63030562.047500.425002.717801.63540K562NELFE
CD97ENSG00000123146.15692.66390494.882300.485002.639601.66320K562RPS3
CD97ENSG00000123146.151471.378501089.681300.433205.926304.76850K562SF3A3
CD97ENSG00000123146.15429.42730294.250900.545304.146903.09470K562SF3B4
CD97ENSG00000123146.151242.57520684.585600.859903.955302.28400K562SFPQ
CD97ENSG00000123146.15666.14900497.925000.419802.790001.76050K562SRFBP1
CD97ENSG00000123146.151433.46150546.200401.3919035.3642032.88880K562SRSF1
CD97ENSG00000123146.15664.45910477.640100.476203.429302.24050K562SRSF4
CD97ENSG00000123146.15781.25730515.925500.598505.584803.99160K562SRSF5
CD97ENSG00000123146.15943.82170525.833300.843804.943803.55140K562SUPV3L1
CD97ENSG00000123146.15731.271701007.23070-0.461904.702103.62600K562SYNCRIP
CD97ENSG00000123146.15912.41290552.720400.723005.029904.06090K562TARDBP
CD97ENSG00000123146.15745.46110479.454800.636605.158002.90300K562TFIP11
CD97ENSG00000123146.15824.91700533.179700.629506.922305.53680K562TIA1
CD97ENSG00000123146.15808.86760523.373500.628004.163102.77840K562TRA2A
CD97ENSG00000123146.15797.99960588.262400.439803.116202.09950K562TRIM56
CD97ENSG00000123146.151624.924501286.008600.337404.311602.72580K562TROVE2
CD97ENSG00000123146.152467.254701795.969500.458006.008304.00560K562UBE2L3
CD97ENSG00000123146.151844.253701170.792700.6555016.0524014.48600K562UPF1
CD97ENSG00000123146.151527.182901070.585000.512404.058802.59500K562UTP3
CD97ENSG00000123146.15757.574501041.83610-0.459703.914702.91970K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CD97 is not available on ENCORE database.





5 RBPs can affect the splicing of CD97 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECD97ENSG00000123146.15chr19+1450715314507285145017351450189114508469145086160.445000.000000.00000includedK562SRSF1
SECD97ENSG00000123146.15chr19+145134081451367414512464145125721451519414515374-0.085000.001040.01258excludedK562AQR
SECD97ENSG00000123146.15chr19+145071531450728514501735145018911450846914508616-0.306000.000120.07243excludedK562HLTF
SECD97ENSG00000123146.15chr19+1450715314507285145017351450189114508469145086160.271000.001470.02642includedK562HNRNPC
MXECD97ENSG00000123146.15chr19+14517680145177721451799914518041145175111451757814518719145188210.345000.000320.010571includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CD97 is not avaliable on ENCORE database.