CAPZA2

General Information

Gene Name       : CAPZA2
Gene ID             : ENSG00000198898.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CAPZA2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CAPZA2ENSG00000198898.1363.1270.0066.56ENCSR000AEF
HepG2CAPZA2ENSG00000198898.1339.9683.3261.64ENCSR985KAT
K562CAPZA2ENSG00000198898.13112.7199.91106.31ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CAPZA2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CAPZA2 RNA is bound by 27 proteins.  







eCLIP assay for CAPZA2 is not avaliable on ENCORE database.





27 proteins are bound to CAPZA2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7116557845116557868+3'-UTR,CDS3.854949.54328K562YBX3
chr7116528180116528234+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.955734.75872K562DDX24
chr7116550286116550366+3'-UTR,CDS,intron-Proximal4.327373.01429K562IGF2BP1
chr7116550285116550364+3'-UTR,CDS,intron-Proximal4.027283.18462K562IGF2BP2
chr7116557938116557961+3'-UTR4.5145521.73088K562YBX3
chr7116550360116550429+3'-UTR,CDS,intron-Proximal4.118605.47926K562AQR
chr7116557969116557982+3'-UTR3.7571212.75901K562YBX3
chr7116558136116558214+3'-UTR4.793827.53406K562TIA1
chr7116558680116558733+3'-UTR3.4543714.43961K562PUM2
chr7116558313116558352+3'-UTR4.161424.43679K562IGF2BP1
chr7116544480116544528+3'-UTR,intron-Proximal3.538674.41130K562AQR
chr7116528179116528238+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.196134.30396K562UCHL5
chr7116544434116544456+3'-UTR,CDS,intron-Proximal3.424416.16312K562AQR
chr7116550261116550322+3'-UTR,CDS,intron-Proximal3.032745.31767K562GPKOW
chr7116546270116546337+3'-UTR,CDS,intron-Distal,intron-Proximal3.234823.93669K562AQR
chr7116558285116558360+3'-UTR3.004524.25710K562FAM120A
chr7116544462116544509+3'-UTR,intron-Proximal3.544403.13250K562GPKOW
chr7116550276116550330+3'-UTR,CDS,intron-Proximal3.447236.00009K562SF3B4
chr7116528180116528246+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.7706823.68374K562DDX3X
chr7116557927116557938+3'-UTR4.0873014.02339K562YBX3
chr7116557961116557969+3'-UTR3.689377.19943K562YBX3
chr7116544456116544480+3'-UTR,intron-Proximal4.205629.29543K562AQR
chr7116557980116558051+3'-UTR4.569214.77152K562IGF2BP1
chr7116557923116557927+3'-UTR3.8514611.30069K562YBX3
chr7116552126116552205+3'-UTR,CDS,intron-Proximal3.512874.09885HepG2BCLAF1
chr7116544473116544531+3'-UTR,intron-Proximal4.384434.53454K562PRPF8
chr7116558919116558974+3'-UTR3.629475.49597K562IGF2BP1
chr7116544210116544293+3'-UTR,CDS,intron-Proximal5.245017.75815K562U2AF2
chr7116502631116502716+5'-UTR,CDS,intron-Distal,intron-Proximal3.026354.10845K562DROSHA
chr7116502605116502655+5'-UTR,intron-Distal4.6347721.03043K562DDX3X
chr7116502609116502745+5'-UTR,CDS,intron-Distal,intron-Proximal4.1197012.06991K562SRSF1
chr7116502655116502707+5'-UTR,CDS,intron-Distal,intron-Proximal3.7732230.09248K562DDX3X
chr7116550245116550276+CDS,intron-Proximal5.662135.90023K562SF3B4
chr7116502703116502787+CDS,intron-Distal,intron-Proximal4.036355.84589K562EFTUD2
chr7116503001116503042+intron-Distal4.764963.59041K562DROSHA
chr7116503265116503345+intron-Distal4.354303.90241K562MATR3
chr7116526547116526620+intron-Distal4.110213.71677HepG2HNRNPL
chr7116528060116528144+intron-Distal,intron-Proximal3.321827.01633K562KHSRP
chr7116524615116524715+intron-Distal3.157795.42536K562KHSRP
chr7116540189116540263+intron-Distal3.813603.49896K562KHDRBS1
chr7116507192116507261+intron-Distal3.8944515.59356K562KHSRP
chr7116539963116540055+intron-Distal5.101838.45817HepG2QKI
chr7116502838116502884+intron-Distal3.586433.65183HepG2XRN2
chr7116526951116527021+intron-Distal3.824833.80954K562HNRNPL
chr7116526820116526912+intron-Distal3.509634.23794K562HNRNPL
chr7116467382116467516+intron-Distal3.491384.19039HepG2PTBP1
chr7116554523116554580+intron-Distal3.826717.16567K562AGGF1
chr7116554437116554526+intron-Distal3.008894.92028K562HNRNPL
chr7116528338116528473+intron-Distal,intron-Proximal3.796866.19377K562KHSRP
chr7116525167116525237+intron-Distal3.918093.45805K562KHSRP
chr7116524762116524866+intron-Distal5.212748.57350K562KHSRP
chr7116540283116540363+intron-Distal4.256393.87596K562KHDRBS1
chr7116502802116502910+intron-Distal,intron-Proximal5.520039.80597K562XRN2
chr7116539920116540071+intron-Distal5.6518117.97967K562QKI
chr7116543356116543414+intron-Distal4.958456.27794HepG2SF3A3
chr7116554526116554570+intron-Distal3.124177.32408K562HNRNPL
chr7116451271116451345+intron-Distal4.682274.55788HepG2QKI
chr7116515401116515472+intron-Distal3.303654.70908HepG2QKI
chr7116546449116546505+intron-Distal,intron-Proximal3.384433.20886K562PRPF8
chr7116538920116538980+intron-Proximal4.245663.49003K562PRPF8
chr7116544155116544199+intron-Proximal4.009705.16342K562SF3B4
chr7116538893116538965+intron-Proximal3.699635.83621K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CAPZA2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CAPZA2 is not available on ENCORE database.

  • 90 RBPs can affect the levels of CAPZA2.  








The Knockdown/knockout RNA-Seq assay for CAPZA2 is not available on ENCORE database.





90 RBPs can affect the gene expression of CAPZA2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CAPZA2ENSG00000198898.81509.218101323.276300.189601.852001.33670HepG2ACO1
CAPZA2ENSG00000198898.83066.773702483.176200.304401.892701.44320HepG2AKAP1
CAPZA2ENSG00000198898.81789.896901329.549800.428807.071805.90870HepG2AKAP8L
CAPZA2ENSG00000198898.81154.161901594.59340-0.466302.840401.88930HepG2BCCIP
CAPZA2ENSG00000198898.81673.395401267.815800.400304.510803.55650HepG2CALR
CAPZA2ENSG00000198898.82434.828601986.285100.293603.775603.04690HepG2CELF1
CAPZA2ENSG00000198898.81514.126902135.81370-0.4963012.3558010.96850HepG2DAZAP1
CAPZA2ENSG00000198898.8719.191801223.87220-0.7670018.9081017.18780HepG2DDX19B
CAPZA2ENSG00000198898.8556.543301211.62650-1.1224018.7452017.17500HepG2DDX21
CAPZA2ENSG00000198898.8884.535501467.06860-0.729904.960003.29850HepG2DDX27
CAPZA2ENSG00000198898.8526.650701187.90870-1.1735016.3468013.66290HepG2DDX28
CAPZA2ENSG00000198898.8651.81580839.91760-0.365802.733001.38650HepG2DDX52
CAPZA2ENSG00000198898.81181.111402043.10060-0.790607.904706.91270HepG2DDX6
CAPZA2ENSG00000198898.8924.302301186.58250-0.360405.173804.32670HepG2DNAJC2
CAPZA2ENSG00000198898.81238.827301964.46900-0.665205.874005.02630HepG2EIF2S1
CAPZA2ENSG00000198898.81645.321602171.15630-0.400102.635802.01110HepG2EIF4A3
CAPZA2ENSG00000198898.82459.054002107.051400.222802.417301.62620HepG2EIF4G1
CAPZA2ENSG00000198898.82058.920202626.28670-0.351105.431004.63700HepG2ETF1
CAPZA2ENSG00000198898.8320.59570727.06880-1.1813020.3760017.42440HepG2FAM120A
CAPZA2ENSG00000198898.8622.336501061.41240-0.770203.141402.05730HepG2FTO
CAPZA2ENSG00000198898.8585.89960814.90040-0.476003.912702.98620HepG2FUBP3
CAPZA2ENSG00000198898.81347.527702190.03950-0.700606.533605.49490HepG2FXR1
CAPZA2ENSG00000198898.81564.449302031.88060-0.377202.116501.53180HepG2G3BP1
CAPZA2ENSG00000198898.8917.608501208.73150-0.397503.533502.81500HepG2HNRNPA1
CAPZA2ENSG00000198898.8840.774001344.45450-0.677208.495707.33280HepG2HNRNPC
CAPZA2ENSG00000198898.8999.256101292.43740-0.371204.350403.47360HepG2HNRNPF
CAPZA2ENSG00000198898.81312.402702056.76790-0.648207.182206.09600HepG2HNRNPK
CAPZA2ENSG00000198898.81425.331801945.58390-0.4489010.132008.91980HepG2HNRNPL
CAPZA2ENSG00000198898.81042.493101272.68950-0.287802.213601.56140HepG2IGF2BP1
CAPZA2ENSG00000198898.8713.542902065.46820-1.5334019.3999017.79370HepG2IGF2BP2
CAPZA2ENSG00000198898.81017.902701364.24500-0.422506.719105.62640HepG2ILF2
CAPZA2ENSG00000198898.81442.799102255.12680-0.644305.946605.03490HepG2NCBP2
CAPZA2ENSG00000198898.81360.149902008.68150-0.562504.387403.49190HepG2PABPC4
CAPZA2ENSG00000198898.8921.749901322.02880-0.520305.572004.42810HepG2PARN
CAPZA2ENSG00000198898.81630.381102025.82080-0.313304.423603.68610HepG2PCBP1
CAPZA2ENSG00000198898.8518.61820672.74350-0.375402.745301.52130HepG2PKM
CAPZA2ENSG00000198898.8814.098301191.22650-0.549205.635504.61670HepG2PPIL4
CAPZA2ENSG00000198898.8604.32850785.96380-0.379103.596602.72530HepG2PRPF4
CAPZA2ENSG00000198898.81528.165001209.768500.337002.661701.86910HepG2PRPF8
CAPZA2ENSG00000198898.81749.431702061.32850-0.236702.740002.19460HepG2PTBP1
CAPZA2ENSG00000198898.81790.798302232.51200-0.318103.695902.99020HepG2QKI
CAPZA2ENSG00000198898.82021.271402294.07720-0.182701.857301.39470HepG2NELFE
CAPZA2ENSG00000198898.81788.856802136.59130-0.256303.204902.54800HepG2RECQL
CAPZA2ENSG00000198898.81129.953801392.15860-0.301102.077201.47550HepG2RPLP0
CAPZA2ENSG00000198898.8556.30520791.57470-0.508804.485403.72320HepG2RPS19
CAPZA2ENSG00000198898.8817.501401454.74810-0.8315010.955509.45160HepG2RPS2
CAPZA2ENSG00000198898.8935.502501484.91400-0.666607.025305.32640HepG2RPS5
CAPZA2ENSG00000198898.81551.740301196.748600.374702.823802.02980HepG2RRP9
CAPZA2ENSG00000198898.8709.403701189.40380-0.7456013.7516012.47740HepG2SAFB2
CAPZA2ENSG00000198898.81960.806101318.998700.571904.489503.61940HepG2SF3A3
CAPZA2ENSG00000198898.81628.664501938.41770-0.251203.542302.76470HepG2SLBP
CAPZA2ENSG00000198898.8906.966401387.08140-0.6129014.4474013.15720HepG2SMN1
CAPZA2ENSG00000198898.82917.390902479.293900.234603.614503.06540HepG2SRFBP1
CAPZA2ENSG00000198898.83292.783402240.095800.5556015.1737014.25670HepG2SRSF1
CAPZA2ENSG00000198898.82625.624702152.636300.286504.455303.83580HepG2SSB
CAPZA2ENSG00000198898.82026.567402270.11080-0.163701.876201.34550HepG2SUCLG1
CAPZA2ENSG00000198898.81676.391002013.44520-0.264302.859402.29000HepG2TAF15
CAPZA2ENSG00000198898.8508.852401297.88850-1.3508035.8141034.38710HepG2TIAL1
CAPZA2ENSG00000198898.8848.040401309.34660-0.6266012.2207011.15730HepG2TRIM56
CAPZA2ENSG00000198898.81660.704001975.04680-0.250102.061801.31820HepG2TUFM
CAPZA2ENSG00000198898.8677.771701429.48360-1.0766010.212408.22570HepG2UPF2
CAPZA2ENSG00000198898.81306.284501129.348500.209901.945601.42510HepG2UTP3
CAPZA2ENSG00000198898.81030.501401536.41100-0.576204.861103.90820HepG2XRN2
CAPZA2ENSG00000198898.84221.459502584.654900.7077024.8802023.29100K562AGGF1
CAPZA2ENSG00000198898.83815.953702840.042500.426004.878803.48590K562AKAP8
CAPZA2ENSG00000198898.83781.862302689.425400.491706.353405.33410K562AKAP8L
CAPZA2ENSG00000198898.8626.23220830.66860-0.407602.328301.37830K562CCAR1
CAPZA2ENSG00000198898.82667.745203216.47560-0.269903.670702.38910K562CPEB4
CAPZA2ENSG00000198898.88541.753305993.565200.5110010.997909.12510K562CELF1
CAPZA2ENSG00000198898.83867.098503328.348500.216302.961002.28870K562DDX47
CAPZA2ENSG00000198898.83459.170702894.172600.257203.129802.19040K562DKC1
CAPZA2ENSG00000198898.82028.129702899.09720-0.515509.868308.63590K562EIF2S2
CAPZA2ENSG00000198898.8888.372501870.49150-1.0742015.1713011.91700K562FAM120A
CAPZA2ENSG00000198898.83245.831302489.932300.382403.890402.87450K562FIP1L1
CAPZA2ENSG00000198898.84059.041702796.637900.537303.812602.95290K562G3BP2
CAPZA2ENSG00000198898.82407.649001989.201800.275303.102901.89220K562GLRX3
CAPZA2ENSG00000198898.81032.031101808.97910-0.8097014.3252013.05160K562HNRNPC
CAPZA2ENSG00000198898.81235.607001615.42470-0.386703.639602.31380K562HNRNPF
CAPZA2ENSG00000198898.82289.500003007.89820-0.393704.587203.19140K562HNRNPL
CAPZA2ENSG00000198898.81602.281903377.42860-1.0758016.9641014.04140K562IGF2BP2
CAPZA2ENSG00000198898.84093.809402854.241000.520203.593702.63830K562KIF1C
CAPZA2ENSG00000198898.81201.824901613.04820-0.424604.327202.34350K562LSM11
CAPZA2ENSG00000198898.83418.824102732.139200.323402.766101.69030K562MAK16
CAPZA2ENSG00000198898.83933.747003197.458500.298902.803801.88860K562MBNL1
CAPZA2ENSG00000198898.83852.381902241.179000.781403.187002.22670K562NAA15
CAPZA2ENSG00000198898.81344.814901781.11920-0.405402.811001.37790K562NUSAP1
CAPZA2ENSG00000198898.82501.858801848.020700.436902.628301.81980K562PCBP3
CAPZA2ENSG00000198898.81342.885201766.12840-0.395303.695902.00970K562PHF6
CAPZA2ENSG00000198898.81707.298201417.534200.268202.445101.69470K562POLR2G
CAPZA2ENSG00000198898.83293.840202045.006300.6876010.387908.92760K562PRPF8
CAPZA2ENSG00000198898.8966.415201621.94040-0.7470010.528008.51770K562PSIP1
CAPZA2ENSG00000198898.82866.785203449.64040-0.267002.597601.95080K562PTBP1
CAPZA2ENSG00000198898.85249.625602667.352800.9767021.2559019.77820K562PUS1
CAPZA2ENSG00000198898.84239.232202598.783600.7059018.4838016.91500K562RBM15
CAPZA2ENSG00000198898.81018.231601479.81590-0.539406.823905.26540K562RCC2
CAPZA2ENSG00000198898.83048.996802083.241700.549405.639004.46880K562RPS19
CAPZA2ENSG00000198898.83313.771402091.121600.664106.220404.25300K562RRP9
CAPZA2ENSG00000198898.82658.832902292.950400.213502.318301.56620K562SF3A3
CAPZA2ENSG00000198898.81017.916901402.82540-0.462704.444703.05850K562SRFBP1
CAPZA2ENSG00000198898.81086.440301499.33750-0.464703.566302.34950K562SRSF4
CAPZA2ENSG00000198898.82439.722003422.74800-0.488405.454104.44340K562TARDBP
CAPZA2ENSG00000198898.82544.929203301.55360-0.375504.677603.57190K562TIA1
CAPZA2ENSG00000198898.81128.318801560.03470-0.467403.905002.78100K562TIAL1
CAPZA2ENSG00000198898.81247.335601657.34130-0.410003.682602.56170K562TRIM56
CAPZA2ENSG00000198898.82275.697803118.30980-0.454506.105203.66140K562UPF2
CAPZA2ENSG00000198898.82806.818102192.360100.356404.285303.24870K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CAPZA2 is not available on ENCORE database.





3 RBPs can affect the splicing of CAPZA2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECAPZA2ENSG00000198898.8chr7+116546316116546396116544230116544437116550266116550365-0.088000.000000.00000excludedK562AQR
SECAPZA2ENSG00000198898.8chr7+116533047116533099116502653116502704116538825116538889-0.071000.001320.08971excludedK562SUPV3L1
SECAPZA2ENSG00000198898.8chr7+116546316116546396116544230116544437116550266116550365-0.052000.000510.01153excludedK562U2AF2
A3SSCAPZA2ENSG00000198898.8chr7+1165502661165503651165502861165503651165462241165463960.103000.000000.00000longerK562AQR
MXECAPZA2ENSG00000198898.8chr7+1165443161165444371165463161165463961165388251165388891165502861165503650.058000.000000.000011includedK562AQR
MXECAPZA2ENSG00000198898.8chr7+1165281801165282441165388251165388891165026531165027041165442301165444370.101000.001390.031531includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CAPZA2 is not avaliable on ENCORE database.