C19orf66

General Information

Gene Name       : C19orf66
Gene ID             : ENSG00000130813.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C19orf66)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C19orf66ENSG00000130813.1726.3533.7430.05ENCSR000AEF
HepG2C19orf66ENSG00000130813.1712.397.189.79ENCSR985KAT
K562C19orf66ENSG00000130813.1710.1811.2910.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C19orf66 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C19orf66 RNA is bound by 4 proteins.  







eCLIP assay for C19orf66 is not avaliable on ENCORE database.





4 proteins are bound to C19orf66 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191020192310201974+3'-UTR,CDS,intron-Proximal3.902243.56019HepG2GRWD1
chr191020294510203017+3'-UTR,CDS3.409843.12941K562UCHL5
chr191020034410200371+3'-UTR,CDS3.100896.00907HepG2PPIG
chr191020065010200726+3'-UTR,CDS,intron-Proximal3.327746.46638HepG2PPIG
chr191020211310202206+3'-UTR,CDS,intron-Distal,intron-Proximal3.303726.89519HepG2PPIG
chr191020288310203004+3'-UTR,CDS3.788646.39499HepG2GRWD1
chr191020033110200344+3'-UTR,CDS,intron-Proximal3.393963.93645HepG2PPIG
chr191020294510203004+3'-UTR,CDS5.403397.65840HepG2PPIG
chr191020192310202038+3'-UTR,CDS,intron-Proximal4.4196011.01413HepG2PPIG
chr191020031210200370+3'-UTR,CDS,intron-Proximal4.124263.01428K562UCHL5
chr191019792610197977+5'-UTR,CDS,intron-Proximal4.960776.16445HepG2PPIG
chr191019764210197727+5'-UTR,CDS4.349894.69071HepG2GRWD1
chr191019793010197985+5'-UTR,CDS,intron-Proximal3.975663.56019HepG2GRWD1
chr191019764810197729+5'-UTR,CDS,intron-Proximal3.011423.95327HepG2PPIG
chr191020274510202846+CDS,intron-Proximal4.460615.18972HepG2GRWD1
chr191020274710202789+CDS3.478934.13746HepG2PPIG
chr191020256210202637+intron-Distal3.918903.33442K562HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C19orf66 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C19orf66 is not available on ENCORE database.

  • 107 RBPs can affect the levels of C19orf66.  








The Knockdown/knockout RNA-Seq assay for C19orf66 is not available on ENCORE database.





107 RBPs can affect the gene expression of C19orf66 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C19orf66ENSG00000130813.13224.64250348.94960-0.635403.691702.46130HepG2AATF
C19orf66ENSG00000130813.13368.31340584.82590-0.667102.754702.14870HepG2ACO1
C19orf66ENSG00000130813.13497.26550661.97610-0.412802.099701.62940HepG2AKAP1
C19orf66ENSG00000130813.13847.72150547.690800.630105.269404.20270HepG2ASCC1
C19orf66ENSG00000130813.13939.77850671.295200.485303.580301.99130HepG2ATP5C1
C19orf66ENSG00000130813.13435.10010288.810400.591102.959202.02850HepG2BCLAF1
C19orf66ENSG00000130813.13866.20600552.153700.649506.436605.56790HepG2BOP1
C19orf66ENSG00000130813.13882.57480506.887000.800008.707807.54680HepG2CPSF6
C19orf66ENSG00000130813.13809.22500612.709800.401202.586101.51730HepG2CPSF7
C19orf66ENSG00000130813.13778.60780569.040300.452305.699904.69060HepG2DAZAP1
C19orf66ENSG00000130813.13959.79070495.862200.9527013.5967011.11270HepG2DDX47
C19orf66ENSG00000130813.13515.34340326.846000.656803.516402.65810HepG2DDX55
C19orf66ENSG00000130813.13378.83200575.61410-0.603502.717701.74900HepG2DDX59
C19orf66ENSG00000130813.13477.66690303.773000.652905.166703.85290HepG2DHX30
C19orf66ENSG00000130813.13849.37020314.958201.4311012.7081011.29130HepG2DNAJC21
C19orf66ENSG00000130813.13393.05020312.160000.332302.165901.57560HepG2DNAJC2
C19orf66ENSG00000130813.131148.64000578.525700.9894011.5465010.26740HepG2EIF4A3
C19orf66ENSG00000130813.13845.89970561.424400.591308.143706.84810HepG2EIF4G1
C19orf66ENSG00000130813.13967.99670537.803100.847808.049506.69100HepG2EIF4G2
C19orf66ENSG00000130813.13505.02710751.58860-0.573603.342002.50360HepG2FIP1L1
C19orf66ENSG00000130813.13401.35780272.031600.561002.730301.47090HepG2FKBP4
C19orf66ENSG00000130813.13863.98110507.797700.766603.017001.95490HepG2FTO
C19orf66ENSG00000130813.13350.37380511.45390-0.545704.071903.12630HepG2FUBP3
C19orf66ENSG00000130813.13416.72260575.16250-0.464902.823601.92320HepG2G3BP2
C19orf66ENSG00000130813.13789.50650574.540700.458402.761002.12000HepG2GPKOW
C19orf66ENSG00000130813.13499.25910353.683200.497202.786402.09100HepG2HNRNPC
C19orf66ENSG00000130813.13717.10550472.894900.600607.424006.32200HepG2HNRNPF
C19orf66ENSG00000130813.13761.21400518.341200.554303.514602.76230HepG2HNRNPL
C19orf66ENSG00000130813.13767.68350548.299800.485403.332802.64900HepG2HNRNPLL
C19orf66ENSG00000130813.13405.04170518.38560-0.356002.322801.45020HepG2HNRNPM
C19orf66ENSG00000130813.13747.94150465.665500.683507.854206.69220HepG2IGF2BP1
C19orf66ENSG00000130813.13700.20140550.460500.347001.877801.31140HepG2IGF2BP2
C19orf66ENSG00000130813.13302.57380516.79820-0.772302.258801.37770HepG2IGF2BP3
C19orf66ENSG00000130813.13814.37460584.198400.479103.195902.49140HepG2MAGOH
C19orf66ENSG00000130813.13399.01220587.42170-0.558003.220202.54380HepG2MATR3
C19orf66ENSG00000130813.13394.29180608.00360-0.624805.061203.99340HepG2MSI2
C19orf66ENSG00000130813.13882.55640559.315100.657903.765102.62380HepG2MTPAP
C19orf66ENSG00000130813.13420.59410601.22110-0.515503.161302.48650HepG2NCBP2
C19orf66ENSG00000130813.131057.29860548.364400.947108.664906.21570HepG2NKRF
C19orf66ENSG00000130813.13461.98100571.16940-0.306102.211201.65760HepG2PCBP1
C19orf66ENSG00000130813.13406.26720313.372900.374402.278601.60300HepG2PPIL4
C19orf66ENSG00000130813.13398.97650581.16870-0.542705.348104.63930HepG2PTBP1
C19orf66ENSG00000130813.13876.27410538.646700.701908.189407.23670HepG2PUF60
C19orf66ENSG00000130813.13409.97740595.65280-0.538901.974901.43540HepG2PUS1
C19orf66ENSG00000130813.13454.68780629.45740-0.469203.894103.16970HepG2QKI
C19orf66ENSG00000130813.13191.14430367.90930-0.944704.557803.66520HepG2RAVER1
C19orf66ENSG00000130813.13444.29990663.01740-0.577505.822905.14060HepG2RBM22
C19orf66ENSG00000130813.13399.58720571.25890-0.515604.010403.21060HepG2RBM25
C19orf66ENSG00000130813.13473.23600602.37940-0.348102.627602.02490HepG2RECQL
C19orf66ENSG00000130813.13736.58340509.438500.531804.228203.41140HepG2RPLP0
C19orf66ENSG00000130813.13494.33900368.153600.425102.137501.42900HepG2RPS2
C19orf66ENSG00000130813.13586.83940256.281901.1951010.984509.43520HepG2RPS3A
C19orf66ENSG00000130813.13539.01740316.985700.765806.169604.78210HepG2SERBP1
C19orf66ENSG00000130813.13434.40410892.26040-1.0384010.074108.72520HepG2SF3A3
C19orf66ENSG00000130813.13788.53660542.676600.539004.387303.51640HepG2SF3B1
C19orf66ENSG00000130813.13441.48380605.10310-0.454803.990903.30240HepG2SF3B4
C19orf66ENSG00000130813.13467.44660748.84350-0.679909.304908.53540HepG2SRFBP1
C19orf66ENSG00000130813.13392.32350631.58380-0.686908.115707.40430HepG2SRSF1
C19orf66ENSG00000130813.13685.90030464.607000.561906.392105.40460HepG2SRSF7
C19orf66ENSG00000130813.13423.80460513.81600-0.277901.836201.36940HepG2SRSF9
C19orf66ENSG00000130813.13536.36370650.15560-0.277602.053801.59570HepG2SSB
C19orf66ENSG00000130813.13770.37060604.847000.348903.470102.78860HepG2SUCLG1
C19orf66ENSG00000130813.13226.04860567.65650-1.3284022.1668020.79430HepG2TAF15
C19orf66ENSG00000130813.13877.22670566.430200.631002.444201.43810HepG2TBRG4
C19orf66ENSG00000130813.13389.52510521.63680-0.421302.663301.84140HepG2TIA1
C19orf66ENSG00000130813.13655.55570341.418700.9411012.8873011.94450HepG2TIAL1
C19orf66ENSG00000130813.13447.89100344.448100.378802.616702.06480HepG2TRIM56
C19orf66ENSG00000130813.13318.73530192.175300.729804.248503.30720HepG2UCHL5
C19orf66ENSG00000130813.13990.50340791.296800.323803.372802.61420HepG2UPF1
C19orf66ENSG00000130813.13476.82780297.853500.678803.172602.09630HepG2UPF2
C19orf66ENSG00000130813.13999.90540813.355800.297802.702301.66510HepG2UTP18
C19orf66ENSG00000130813.13607.30220763.96870-0.331102.755702.16010HepG2UTP3
C19orf66ENSG00000130813.13742.20700870.27750-0.229702.017901.53140HepG2ZNF622
C19orf66ENSG00000130813.13212.34590307.29260-0.533202.569501.43730K562AARS
C19orf66ENSG00000130813.13435.28650344.720000.336401.856401.37280K562AGGF1
C19orf66ENSG00000130813.13594.01960358.690600.727706.441005.41280K562AKAP8L
C19orf66ENSG00000130813.13480.40610351.258300.451602.452301.63510K562BOP1
C19orf66ENSG00000130813.13437.07430267.046500.710702.988501.88660K562CCAR1
C19orf66ENSG00000130813.13548.96550411.979300.414002.732001.56570K562CCDC124
C19orf66ENSG00000130813.13848.65110526.157600.689603.718202.45280K562CNOT7
C19orf66ENSG00000130813.13546.59050373.465600.549404.403203.41650K562CPSF6
C19orf66ENSG00000130813.131046.77450658.812700.667908.139306.50100K562CELF1
C19orf66ENSG00000130813.13694.12950499.050200.475904.274102.75040K562DDX21
C19orf66ENSG00000130813.13863.32830553.599000.641009.194808.09040K562DDX47
C19orf66ENSG00000130813.13410.02470266.476300.621603.437801.53500K562DDX51
C19orf66ENSG00000130813.13465.55220298.994300.638703.678702.10770K562DHX30
C19orf66ENSG00000130813.13420.56440287.566000.548304.448902.89100K562EIF2S1
C19orf66ENSG00000130813.13395.62290303.282500.383402.246301.58810K562EIF2S2
C19orf66ENSG00000130813.13423.65750271.617800.641202.856601.83430K562EIF3A
C19orf66ENSG00000130813.13256.41440164.320000.641903.794002.87180K562EIF3G
C19orf66ENSG00000130813.13805.24610535.742300.587806.521405.10020K562EIF4G2
C19orf66ENSG00000130813.13521.55300315.395900.725606.923804.88030K562EXOSC5
C19orf66ENSG00000130813.13543.89450380.036400.517103.324202.38220K562FMR1
C19orf66ENSG00000130813.13499.88550322.134300.633804.354203.18220K562FTO
C19orf66ENSG00000130813.13194.81910284.44060-0.546003.063502.43120K562FXR1
C19orf66ENSG00000130813.13106.26720169.92300-0.677202.392901.74190K562G3BP2
C19orf66ENSG00000130813.13661.41930356.549600.891409.932108.41690K562GPKOW
C19orf66ENSG00000130813.13528.88430404.126800.388002.127901.45930K562GRSF1
C19orf66ENSG00000130813.13537.51470407.864900.398102.684601.62860K562HNRNPA1
C19orf66ENSG00000130813.13543.97700336.146700.694405.936005.09410K562HNRNPC
C19orf66ENSG00000130813.13436.51660300.220400.539902.945901.76700K562HNRNPF
C19orf66ENSG00000130813.13623.76420425.437500.552003.391802.51190K562HSPD1
C19orf66ENSG00000130813.13318.80130195.767800.703403.704302.45100K562IGF2BP2
C19orf66ENSG00000130813.13298.57540205.227800.540803.064002.09000K562MATR3
C19orf66ENSG00000130813.13477.35590348.039900.455702.775401.89750K562METAP2
C19orf66ENSG00000130813.13751.54160571.035300.396202.361701.32270K562MSI2
C19orf66ENSG00000130813.13770.85870537.206200.520906.752605.65530K562NSUN2
C19orf66ENSG00000130813.13753.85120505.487200.576502.576301.39730K562PABPC1
C19orf66ENSG00000130813.13483.58910328.215100.559003.843402.11700K562PHF6
C19orf66ENSG00000130813.13143.44980239.93530-0.742102.720801.97760K562PRPF8
C19orf66ENSG00000130813.13491.23970301.402100.704605.035703.76720K562PSIP1
C19orf66ENSG00000130813.13806.49120609.173400.404703.391402.32710K562PUM2
C19orf66ENSG00000130813.13444.04560275.045400.690905.566204.15350K562RCC2
C19orf66ENSG00000130813.13402.08790244.322000.718603.978802.99700K562RPS19
C19orf66ENSG00000130813.13519.54270324.937800.677002.607601.35910K562SFPQ
C19orf66ENSG00000130813.13324.29850543.00890-0.743709.165907.57190K562SRPK2
C19orf66ENSG00000130813.13301.17860195.896100.620403.538002.74560K562SRSF1
C19orf66ENSG00000130813.13765.67810509.998800.586105.721303.66020K562SUCLG1
C19orf66ENSG00000130813.13184.05090308.65450-0.745905.176804.04610K562SYNCRIP
C19orf66ENSG00000130813.13280.09170198.238800.498602.340201.68690K562TARDBP
C19orf66ENSG00000130813.13705.62740289.891801.2833016.7226014.24280K562TIAL1
C19orf66ENSG00000130813.13801.39590569.607500.492405.561204.58310K562UPF1
C19orf66ENSG00000130813.13704.62280487.401000.531603.925602.87740K562WDR3
C19orf66ENSG00000130813.13825.03160521.273300.662307.111005.61740K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C19orf66 is not available on ENCORE database.





12 RBPs can affect the splicing of C19orf66 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC19orf66ENSG00000130813.13chr19+1019978610200054101979261019797610200332102003710.157000.000020.00094includedHepG2HNRNPK
SEC19orf66ENSG00000130813.13chr19+101997861020005410197926101979761020033210200371-0.067000.001260.05759excludedHepG2PCBP1
SEC19orf66ENSG00000130813.13chr19+1019978610200054101979261019797610200332102003710.185000.003190.09010includedK562HNRNPU
SEC19orf66ENSG00000130813.13chr19+1019978610200054101979261019797610200332102003710.104000.001760.06601includedHepG2HNRNPU
SEC19orf66ENSG00000130813.13chr19+102021511020230610201925102020291020274510203918-0.191000.000300.02455excludedHepG2SRSF9
RIC19orf66ENSG00000130813.13chr19+101997861020005410199786101998841019998210200054-0.649000.005790.08199excludedHepG2PCBP2
RIC19orf66ENSG00000130813.13chr19+1020192510202306102019251020202910202259102023060.121000.005100.05100includedHepG2SF3A3
RIC19orf66ENSG00000130813.13chr19+101999821020037110199982102000541020033210200371-0.497000.001530.03524excludedK562HNRNPC
RIC19orf66ENSG00000130813.13chr19+1019998210200371101999821020005410200332102003710.574000.001860.05517includedK562SF3B1
RIC19orf66ENSG00000130813.13chr19+1020192510202306102019251020202910202151102023060.345000.008940.08613includedHepG2PCBP1
RIC19orf66ENSG00000130813.13chr19+1020192510202306102019251020202910202151102023060.226000.002630.02656includedHepG2U2AF1
RIC19orf66ENSG00000130813.13chr19+1020192510202306102019251020202910202151102023060.394000.004480.04692includedHepG2NCBP2
RIC19orf66ENSG00000130813.13chr19+1020192510202306102019251020202910202151102023060.520000.000720.00701includedHepG2SF3B4
RIC19orf66ENSG00000130813.13chr19+1020192510202306102019251020202910202151102023060.242000.001720.07346includedHepG2LARP4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C19orf66 is not avaliable on ENCORE database.