ARSA

General Information

Gene Name       : ARSA
Gene ID             : ENSG00000100299.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARSA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARSAENSG00000100299.170.131.760.95ENCSR000AEF
HepG2ARSAENSG00000100299.1710.211.976.09ENCSR985KAT
K562ARSAENSG00000100299.173.790.812.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARSA is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARSA RNA is bound by 5 proteins.  







eCLIP assay for ARSA is not avaliable on ENCORE database.





5 proteins are bound to ARSA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr225106348651063538-3'-UTR,intron-Distal3.099813.27682HepG2LARP4
chr225106353851063622-3'-UTR,CDS,intron-Distal3.956935.48721HepG2LARP4
chr225106580651065830-5'-UTR,CDS,intron-Distal3.960153.19000HepG2SND1
chr225106581351065836-5'-UTR,CDS,intron-Distal,intron-Proximal4.120223.82843HepG2PPIG
chr225106390651064014-CDS,intron-Distal,intron-Proximal3.941803.65412HepG2HNRNPK
chr225106379451063834-CDS,intron-Distal4.433923.19000HepG2SND1
chr225106521051065248-intron-Distal,intron-Proximal4.234274.16174HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARSA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARSA is not available on ENCORE database.

  • 110 RBPs can affect the levels of ARSA.  








The Knockdown/knockout RNA-Seq assay for ARSA is not available on ENCORE database.





110 RBPs can affect the gene expression of ARSA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARSAENSG00000100299.13521.26520366.963700.506302.581101.67110HepG2ABCF1
ARSAENSG00000100299.13320.55100446.94040-0.479503.939803.23820HepG2ACO1
ARSAENSG00000100299.13745.03440326.911901.188307.298106.47870HepG2AKAP1
ARSAENSG00000100299.13517.10630281.797100.875703.884202.65320HepG2AKAP8
ARSAENSG00000100299.13290.20820157.347200.883003.534202.52200HepG2BCLAF1
ARSAENSG00000100299.13415.55590169.925701.2900010.179009.12530HepG2BOP1
ARSAENSG00000100299.13549.30970311.812100.816803.656902.52090HepG2CCAR1
ARSAENSG00000100299.13305.86820155.996400.971306.461605.44470HepG2CPSF6
ARSAENSG00000100299.13330.67220204.109800.696005.549304.69790HepG2CELF1
ARSAENSG00000100299.13311.10710219.429900.503603.429102.61970HepG2DAZAP1
ARSAENSG00000100299.13327.00260413.34460-0.338002.285201.52250HepG2DDX19B
ARSAENSG00000100299.13324.25760161.090201.009202.247001.62820HepG2DDX21
ARSAENSG00000100299.13646.94570178.129401.8606018.7331016.98710HepG2DDX55
ARSAENSG00000100299.13382.43010254.081900.589803.170802.09560HepG2DDX5
ARSAENSG00000100299.13821.89850269.158901.610405.095804.27980HepG2DDX6
ARSAENSG00000100299.13321.23900106.549001.5920019.1816017.51080HepG2DNAJC21
ARSAENSG00000100299.13257.77340105.582201.2876013.1095011.79720HepG2DNAJC2
ARSAENSG00000100299.13597.64540258.513601.208904.767704.00110HepG2EIF2S1
ARSAENSG00000100299.13292.51760207.400600.496002.461301.69140HepG2EIF4G2
ARSAENSG00000100299.13252.89600436.71900-0.788205.120103.98700HepG2EWSR1
ARSAENSG00000100299.13278.10670142.523200.964303.379002.07240HepG2FAM120A
ARSAENSG00000100299.13215.68510318.48300-0.562303.262302.41310HepG2FUBP3
ARSAENSG00000100299.13296.30330137.187401.110803.077601.90010HepG2FUS
ARSAENSG00000100299.13510.92880288.476700.824602.324601.68830HepG2FXR1
ARSAENSG00000100299.13445.99220267.423300.737802.430801.80530HepG2G3BP1
ARSAENSG00000100299.13276.55990176.821200.645202.912402.25690HepG2GPKOW
ARSAENSG00000100299.13200.74980107.569500.900001.911901.36330HepG2HNRNPA1
ARSAENSG00000100299.13275.97270201.680800.452402.392501.51540HepG2HNRNPA2B1
ARSAENSG00000100299.13433.92690199.872201.1183014.3157012.89390HepG2HNRNPL
ARSAENSG00000100299.13279.11980168.744900.725903.718302.99850HepG2HNRNPLL
ARSAENSG00000100299.13258.15540118.852201.119007.606906.63960HepG2HNRNPU
ARSAENSG00000100299.13401.59300264.498400.602401.995001.37290HepG2IGF2BP1
ARSAENSG00000100299.13473.09350271.765500.799703.061202.35540HepG2IGF2BP2
ARSAENSG00000100299.13238.87400121.405100.976308.137906.94910HepG2ILF2
ARSAENSG00000100299.13327.52340158.941801.043002.642401.48370HepG2KHDRBS1
ARSAENSG00000100299.13530.46540273.470200.955802.177301.30150HepG2KHSRP
ARSAENSG00000100299.13519.37030408.544400.346202.710901.69970HepG2KIF1C
ARSAENSG00000100299.13594.41130329.654700.850403.553102.61140HepG2LARP4
ARSAENSG00000100299.13249.31150142.426400.807604.054202.67120HepG2LARP7
ARSAENSG00000100299.13538.74880288.579000.900503.931103.15020HepG2MAGOH
ARSAENSG00000100299.13468.89160290.138100.692402.052101.50330HepG2MATR3
ARSAENSG00000100299.13534.16410299.755300.833404.429703.42160HepG2MSI2
ARSAENSG00000100299.13717.31530296.927001.272409.047907.94190HepG2NCBP2
ARSAENSG00000100299.13424.84450217.588300.965205.591304.51350HepG2NOL12
ARSAENSG00000100299.13191.7635073.572801.382004.414202.61740HepG2NOLC1
ARSAENSG00000100299.13533.33410163.707101.7038012.040809.67050HepG2NONO
ARSAENSG00000100299.13582.31560264.223601.139906.954905.81600HepG2PABPC4
ARSAENSG00000100299.13240.05280117.654101.028707.677306.38000HepG2PARN
ARSAENSG00000100299.13192.54910275.16620-0.515102.781402.17360HepG2PCBP1
ARSAENSG00000100299.13319.90560106.008201.5934019.6464017.82050HepG2PPIL4
ARSAENSG00000100299.13149.87770248.52940-0.729602.773101.99910HepG2PRPF4
ARSAENSG00000100299.13637.43500280.011001.1867020.6028019.37480HepG2PTBP1
ARSAENSG00000100299.13472.28140207.717601.1849014.1009012.89560HepG2PUF60
ARSAENSG00000100299.13555.94090220.513901.3340013.7586012.64740HepG2PUM1
ARSAENSG00000100299.13304.26540220.345100.465502.515901.87600HepG2PUM2
ARSAENSG00000100299.13602.42800455.234200.404103.638702.95240HepG2PUS1
ARSAENSG00000100299.13486.06280303.218000.680706.048705.17490HepG2QKI
ARSAENSG00000100299.13307.67200465.41770-0.597103.517402.95260HepG2RBM22
ARSAENSG00000100299.13330.52720171.753400.944305.660504.22660HepG2RBM27
ARSAENSG00000100299.13298.20460139.472401.096202.967801.86760HepG2RCC2
ARSAENSG00000100299.13597.38360311.609500.938804.447103.79010HepG2NELFE
ARSAENSG00000100299.13513.68010290.250800.823504.408703.65370HepG2RECQL
ARSAENSG00000100299.13317.18750155.094201.032103.133202.48460HepG2RPS19
ARSAENSG00000100299.13377.50180158.384101.2530010.235208.78000HepG2RPS2
ARSAENSG00000100299.13413.12700167.468501.302607.789006.46510HepG2RPS3A
ARSAENSG00000100299.13290.97660161.695300.847504.506403.11720HepG2RPS5
ARSAENSG00000100299.13263.30720105.848201.3147012.7407011.50900HepG2SAFB2
ARSAENSG00000100299.13227.9136083.286501.452202.759401.41010HepG2SF1
ARSAENSG00000100299.13224.08350346.80860-0.630102.822502.14140HepG2SF3A3
ARSAENSG00000100299.13428.91640291.493200.557104.279603.56840HepG2SF3B4
ARSAENSG00000100299.13474.07470199.194301.2508020.4252018.86230HepG2SLBP
ARSAENSG00000100299.13271.29440123.445501.1359010.536309.41320HepG2SMN1
ARSAENSG00000100299.13274.55770128.339401.097002.524501.61220HepG2SMNDC1
ARSAENSG00000100299.13319.51600122.475201.383305.076102.86660HepG2SND1
ARSAENSG00000100299.13210.67490525.64520-1.319109.826709.04010HepG2SRFBP1
ARSAENSG00000100299.13174.81740304.26990-0.799505.624905.01040HepG2SRSF1
ARSAENSG00000100299.13101.75930179.73160-0.820702.871201.84900HepG2SRSF3
ARSAENSG00000100299.13372.72210205.105800.861608.766307.73440HepG2SRSF5
ARSAENSG00000100299.13152.88640247.55180-0.695304.384603.71940HepG2SRSF9
ARSAENSG00000100299.13273.22610145.781300.906202.413101.39520HepG2STIP1
ARSAENSG00000100299.13457.32080233.249000.9712012.9868011.80500HepG2SUCLG1
ARSAENSG00000100299.13355.84430250.090600.508702.963201.99290HepG2SUPT6H
ARSAENSG00000100299.13436.97490177.282301.301409.097507.98870HepG2SUPV3L1
ARSAENSG00000100299.13334.38130164.508201.023207.752706.61730HepG2TARDBP
ARSAENSG00000100299.13257.98790118.800101.118704.049102.87040HepG2TFIP11
ARSAENSG00000100299.13282.33400115.519501.289208.729807.93150HepG2TIAL1
ARSAENSG00000100299.13358.44160116.517401.6211023.2758021.83780HepG2TRIM56
ARSAENSG00000100299.13500.80150202.951601.303002.274701.48760HepG2TUFM
ARSAENSG00000100299.13117.78900316.88720-1.4278011.9503010.61690HepG2U2AF1
ARSAENSG00000100299.13629.84040214.834401.551706.451105.14110HepG2UBE2L3
ARSAENSG00000100299.13539.56040307.565900.8108010.600509.39320HepG2UPF1
ARSAENSG00000100299.13307.29270150.018601.034403.925502.61380HepG2XPO5
ARSAENSG00000100299.13289.66310174.516300.730902.211201.55690HepG2XRN2
ARSAENSG00000100299.13340.46270245.246700.473203.203902.49040HepG2ZC3H8
ARSAENSG00000100299.13446.04870338.264000.399003.044002.47770HepG2ZNF622
ARSAENSG00000100299.13122.0194065.572700.895803.977702.13120K562AKAP1
ARSAENSG00000100299.13185.11190129.289000.517702.091801.30600K562ATP5C1
ARSAENSG00000100299.13113.1550049.574001.190504.632102.85780K562BCCIP
ARSAENSG00000100299.13142.7865047.904801.575508.840807.09280K562BCLAF1
ARSAENSG00000100299.13219.55980144.438400.604102.973501.82360K562CPEB4
ARSAENSG00000100299.1390.1544050.392000.839102.204701.49750K562CPSF6
ARSAENSG00000100299.13119.0691036.342901.712007.858005.94500K562CSTF2
ARSAENSG00000100299.13200.01650132.145600.597902.543301.38390K562DDX21
ARSAENSG00000100299.13141.0717066.452401.085905.381303.86210K562DDX3X
ARSAENSG00000100299.13213.73080149.460000.515902.348301.74040K562DDX47
ARSAENSG00000100299.13248.38220101.669801.2886010.847309.56690K562EIF2S2
ARSAENSG00000100299.131.1235010.77470-3.261602.000301.41170K562G3BP2
ARSAENSG00000100299.13246.70210135.471100.864704.632603.65580K562GRSF1
ARSAENSG00000100299.1336.7671081.30610-1.144903.294401.74860K562LARP7
ARSAENSG00000100299.1355.3555027.993700.983502.121601.38140K562MAGOH
ARSAENSG00000100299.1368.4860027.938101.293502.435901.57620K562MATR3
ARSAENSG00000100299.13109.5551046.964701.221904.523303.38510K562METAP2
ARSAENSG00000100299.1383.9747043.009900.965202.519701.30300K562NONO
ARSAENSG00000100299.13235.00210165.632900.504602.520601.80450K562NSUN2
ARSAENSG00000100299.13179.3654099.097300.855904.020303.04850K562POLR2G
ARSAENSG00000100299.1374.4009027.197101.451804.959704.09450K562PTBP1
ARSAENSG00000100299.13307.58290209.993600.550502.775701.81490K562PUM2
ARSAENSG00000100299.13187.15640122.217600.614702.107901.62130K562PUS1
ARSAENSG00000100299.1384.4590043.265200.964902.261401.52620K562RPS19
ARSAENSG00000100299.1364.0643026.661301.264703.112402.36600K562SRSF1
ARSAENSG00000100299.1370.2481025.177401.480203.119401.99380K562SRSF5
ARSAENSG00000100299.13104.3266041.124201.342903.369602.23760K562SUPV3L1
ARSAENSG00000100299.1369.0149026.984901.354703.932003.08160K562TARDBP
ARSAENSG00000100299.1361.0554026.029501.229903.024902.16170K562TIA1
ARSAENSG00000100299.1363.7828025.538201.320403.279802.07210K562TRA2A
ARSAENSG00000100299.1384.6456043.525300.959502.553801.58130K562UCHL5
ARSAENSG00000100299.13310.59950175.625100.822506.621905.56450K562UPF1
ARSAENSG00000100299.13105.6896044.321701.253604.596102.89480K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARSA is not available on ENCORE database.





4 RBPs can affect the splicing of ARSA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARSAENSG00000100299.13chr22-510640065106410951063449510638925106436351064491-0.361000.000000.00043excludedHepG2PCBP1
SEARSAENSG00000100299.13chr22-510652615106548051065018510651885106559351065834-0.633000.003890.05705excludedK562HNRNPC
RIARSAENSG00000100299.13chr22-5106598351066598510659835106622051066373510665980.201000.006910.05772includedHepG2RBM22
RIARSAENSG00000100299.13chr22-510659835106659851065983510662205106637351066598-0.352000.000670.08576excludedHepG2SRSF7

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARSA is not avaliable on ENCORE database.