ANKRD13A

General Information

Gene Name       : ANKRD13A
Gene ID             : ENSG00000076513.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ANKRD13A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ANKRD13AENSG00000076513.1666.8751.8659.37ENCSR000AEF
HepG2ANKRD13AENSG00000076513.1616.2822.3119.30ENCSR985KAT
K562ANKRD13AENSG00000076513.1624.3125.2924.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ANKRD13A is not avaliable on ENCORE database.



Proteins bound to RNA
  • ANKRD13A RNA is bound by 15 proteins.  







eCLIP assay for ANKRD13A is not avaliable on ENCORE database.





15 proteins are bound to ANKRD13A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12110477055110477112+3'-UTR4.293439.01592K562PABPC4
chr12110467288110467422+3'-UTR,CDS3.662098.99805HepG2BCLAF1
chr12110476882110476943+3'-UTR4.207983.98716K562IGF2BP1
chr12110476563110476639+3'-UTR3.6325316.42660K562PUM2
chr12110476885110476945+3'-UTR3.085026.32251K562UPF1
chr12110467290110467363+3'-UTR,CDS4.012846.61895K562ZNF622
chr12110475721110475806+3'-UTR3.957385.01178K562PUM2
chr12110463487110463553+3'-UTR,CDS,intron-Proximal4.249155.63851K562SF3B4
chr12110477112110477152+3'-UTR3.358253.07376K562PABPC4
chr12110467284110467367+3'-UTR,CDS3.474664.61143K562UCHL5
chr12110468489110468563+3'-UTR,CDS3.986273.26547HepG2HLTF
chr12110476490110476517+3'-UTR4.482613.69433K562UPF1
chr12110466311110466450+3'-UTR,CDS,intron-Proximal3.348545.39266HepG2GRWD1
chr12110468481110468565+3'-UTR,CDS,intron-Proximal3.483403.90826K562ZNF622
chr12110476045110476163+3'-UTR3.9125710.02205K562UPF1
chr12110476945110477026+3'-UTR3.985728.99604K562UPF1
chr12110449860110449932+5'-UTR,CDS3.791074.09885HepG2BCLAF1
chr12110450952110450973+5'-UTR,CDS4.6124111.65463K562LIN28B
chr12110449809110449874+5'-UTR,CDS,intron-Proximal5.7289613.93407K562LIN28B
chr12110437259110437357+5'-UTR,intron-Distal5.3571116.03443HepG2DDX3X
chr12110471689110471755+CDS,intron-Distal,intron-Proximal4.147953.47885K562LIN28B
chr12110457122110457178+CDS,intron-Proximal3.939563.16986HepG2QKI
chr12110450973110451019+CDS4.7277611.87764K562LIN28B
chr12110437567110437586+CDS,intron-Distal5.5519611.01435K562LIN28B
chr12110456889110456949+CDS,intron-Proximal3.756405.02403K562SF3B4
chr12110437536110437565+CDS,intron-Distal4.234973.98564K562LIN28B
chr12110437586110437589+CDS,intron-Distal5.4741810.50400K562LIN28B
chr12110449596110449777+intron-Distal,intron-Proximal3.599175.04794HepG2KHSRP
chr12110457152110457218+intron-Proximal4.477364.22101K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ANKRD13A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ANKRD13A is not available on ENCORE database.

  • 90 RBPs can affect the levels of ANKRD13A.  








The Knockdown/knockout RNA-Seq assay for ANKRD13A is not available on ENCORE database.





90 RBPs can affect the gene expression of ANKRD13A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ANKRD13AENSG00000076513.121594.248601263.672600.335202.165001.32920HepG2ABCF1
ANKRD13AENSG00000076513.12576.78280998.50160-0.7917014.5365013.37560HepG2ACO1
ANKRD13AENSG00000076513.12986.743401770.94820-0.843809.440608.52210HepG2AKAP1
ANKRD13AENSG00000076513.121308.187001965.58070-0.587405.551104.09530HepG2AKAP8
ANKRD13AENSG00000076513.12807.007701465.32480-0.8606011.097609.60610HepG2ASCC1
ANKRD13AENSG00000076513.121225.46420974.645700.330302.823802.04460HepG2CALR
ANKRD13AENSG00000076513.12905.839601417.28650-0.645804.067403.13320HepG2CNOT7
ANKRD13AENSG00000076513.121113.64560751.739900.566905.311904.38800HepG2CPSF6
ANKRD13AENSG00000076513.12330.82780452.60570-0.452202.464401.44690HepG2CSTF2
ANKRD13AENSG00000076513.12688.494101124.78650-0.7081012.7854011.60040HepG2CELF1
ANKRD13AENSG00000076513.12887.577901209.60420-0.446606.358005.30070HepG2DAZAP1
ANKRD13AENSG00000076513.12530.09100747.16300-0.495204.361402.70140HepG2DDX52
ANKRD13AENSG00000076513.12401.12220720.40890-0.844807.018005.85450HepG2DDX55
ANKRD13AENSG00000076513.122034.30000853.664701.2527011.586209.66480HepG2DDX59
ANKRD13AENSG00000076513.12882.482201457.22780-0.723607.091906.14180HepG2DDX6
ANKRD13AENSG00000076513.121202.77320955.252700.332303.497702.74970HepG2DKC1
ANKRD13AENSG00000076513.12415.87700725.57720-0.8030011.4507010.09860HepG2DNAJC21
ANKRD13AENSG00000076513.12535.32450719.21810-0.426004.897104.06890HepG2DNAJC2
ANKRD13AENSG00000076513.12719.88020958.68900-0.413303.428302.12350HepG2EIF2S2
ANKRD13AENSG00000076513.12617.484001507.35960-1.2875016.0366014.46890HepG2EIF4B
ANKRD13AENSG00000076513.121479.395101193.191500.310103.247202.35500HepG2EIF4G1
ANKRD13AENSG00000076513.121642.156301143.029400.522605.176404.08300HepG2EIF4G2
ANKRD13AENSG00000076513.12769.52830975.56760-0.342302.619201.80580HepG2EWSR1
ANKRD13AENSG00000076513.12478.878801276.02930-1.4139021.5080019.73810HepG2FIP1L1
ANKRD13AENSG00000076513.12952.703201562.00220-0.713308.160607.01900HepG2FXR1
ANKRD13AENSG00000076513.121048.532501449.03960-0.466703.568702.81680HepG2G3BP1
ANKRD13AENSG00000076513.121106.88020814.819000.441803.748202.95060HepG2HNRNPC
ANKRD13AENSG00000076513.121711.504701227.628400.479303.054201.46500HepG2HNRNPD
ANKRD13AENSG00000076513.121514.47090945.450300.6796015.0060013.50980HepG2HNRNPF
ANKRD13AENSG00000076513.12822.153401467.15900-0.8355011.7067010.36650HepG2HNRNPK
ANKRD13AENSG00000076513.12823.286201101.91230-0.420506.502005.51140HepG2HNRNPL
ANKRD13AENSG00000076513.121370.56860813.165300.753108.892307.83430HepG2HNRNPLL
ANKRD13AENSG00000076513.12441.58740880.47000-0.9956015.0705013.15070HepG2HNRNPM
ANKRD13AENSG00000076513.121773.34790931.002700.9295010.543009.21740HepG2IGF2BP1
ANKRD13AENSG00000076513.121805.516901472.936100.293601.944701.36930HepG2IGF2BP2
ANKRD13AENSG00000076513.121028.386701481.48640-0.526703.599102.43470HepG2KHSRP
ANKRD13AENSG00000076513.12855.131401571.30900-0.8777010.297509.14270HepG2MATR3
ANKRD13AENSG00000076513.12499.88640757.41050-0.599503.377002.21830HepG2METAP2
ANKRD13AENSG00000076513.12780.533401032.83720-0.404103.293302.41420HepG2MSI2
ANKRD13AENSG00000076513.121414.51290721.079200.9720015.3935013.78760HepG2NSUN2
ANKRD13AENSG00000076513.12867.980501295.30980-0.577603.033602.10140HepG2PABPC1
ANKRD13AENSG00000076513.121926.054601432.389500.427103.449902.64960HepG2PABPC4
ANKRD13AENSG00000076513.12535.57000801.17790-0.581007.532506.24690HepG2PARN
ANKRD13AENSG00000076513.12937.388301414.81890-0.5939011.2920010.19980HepG2PCBP1
ANKRD13AENSG00000076513.121019.218201439.61310-0.498208.357907.51280HepG2PTBP1
ANKRD13AENSG00000076513.12751.694601215.31470-0.6931014.9160013.76610HepG2PUM1
ANKRD13AENSG00000076513.121331.587001017.014400.388705.680804.85550HepG2PUS1
ANKRD13AENSG00000076513.121860.662701559.175000.254902.303601.72420HepG2QKI
ANKRD13AENSG00000076513.12699.139701482.28650-1.0842027.7913026.48910HepG2RBM22
ANKRD13AENSG00000076513.121140.762601415.03700-0.310802.617501.95900HepG2RBM25
ANKRD13AENSG00000076513.121267.081401602.16620-0.338504.287203.64020HepG2NELFE
ANKRD13AENSG00000076513.122195.707301018.419501.1083023.9330022.34230HepG2RPLP0
ANKRD13AENSG00000076513.121991.39600881.504201.1756013.1123011.22830HepG2RPS10
ANKRD13AENSG00000076513.12553.03520704.17320-0.348602.324801.75620HepG2RPS19
ANKRD13AENSG00000076513.121843.091101422.893600.373202.072901.37980HepG2RPS3A
ANKRD13AENSG00000076513.12380.43600549.76500-0.531202.934202.12730HepG2RRP9
ANKRD13AENSG00000076513.121602.87980976.259100.715205.168103.07310HepG2RTF1
ANKRD13AENSG00000076513.121067.323001447.46960-0.439502.954202.25680HepG2SF3A3
ANKRD13AENSG00000076513.12591.04380840.58730-0.508107.209306.24720HepG2SMN1
ANKRD13AENSG00000076513.12647.63340895.53080-0.467602.018901.35590HepG2SNRNP70
ANKRD13AENSG00000076513.121207.492101564.46730-0.373705.416104.81010HepG2SRSF1
ANKRD13AENSG00000076513.12967.692501130.36220-0.224201.964001.42490HepG2SRSF5
ANKRD13AENSG00000076513.121729.47990928.859300.8967026.1984024.48340HepG2SRSF7
ANKRD13AENSG00000076513.122366.489001453.613400.7030020.9940019.86880HepG2SSB
ANKRD13AENSG00000076513.12903.841301285.59410-0.508309.568908.53070HepG2SUCLG1
ANKRD13AENSG00000076513.122292.822801406.167700.7053016.1263014.93880HepG2TAF15
ANKRD13AENSG00000076513.121734.80930792.776701.1297017.6179016.06230HepG2TARDBP
ANKRD13AENSG00000076513.121508.97730786.453400.9400020.2993019.17360HepG2TIAL1
ANKRD13AENSG00000076513.12591.05900793.54790-0.425004.713804.01720HepG2TRIM56
ANKRD13AENSG00000076513.121576.854901183.780100.413502.090501.36900HepG2UBE2L3
ANKRD13AENSG00000076513.12797.052801239.34760-0.6368011.7811010.68050HepG2UTP3
ANKRD13AENSG00000076513.121275.021901074.210700.247102.665902.00580HepG2ZC3H8
ANKRD13AENSG00000076513.121640.448101411.807500.216402.657602.11900HepG2ZNF622
ANKRD13AENSG00000076513.121256.61610896.570800.487003.037701.67430HepG2ZRANB2
ANKRD13AENSG00000076513.121814.532402208.16310-0.283202.226701.63810K562AKAP8L
ANKRD13AENSG00000076513.121304.041201824.09890-0.484205.016604.26840K562AQR
ANKRD13AENSG00000076513.121480.862701120.650500.402003.219002.27640K562BOP1
ANKRD13AENSG00000076513.121577.748101987.33580-0.333004.292302.89400K562CPEB4
ANKRD13AENSG00000076513.121494.251001191.593900.326402.924602.11860K562CPSF6
ANKRD13AENSG00000076513.12650.05030833.00620-0.357802.863101.78900K562CSTF2
ANKRD13AENSG00000076513.121370.078801075.621600.349003.197902.07250K562DDX3X
ANKRD13AENSG00000076513.122362.747702056.351100.200302.110801.52900K562DDX47
ANKRD13AENSG00000076513.121711.887401297.583600.399705.484704.52320K562EIF2S2
ANKRD13AENSG00000076513.121161.747401424.92710-0.294602.129101.38150K562FIP1L1
ANKRD13AENSG00000076513.121592.276501212.378100.393203.306602.36700K562FMR1
ANKRD13AENSG00000076513.121399.917201729.10250-0.304702.616901.88040K562GRSF1
ANKRD13AENSG00000076513.122395.209601176.104601.0260024.4305022.73140K562HNRNPC
ANKRD13AENSG00000076513.121330.430101858.39660-0.482205.821904.23080K562HNRNPL
ANKRD13AENSG00000076513.12640.027601172.03400-0.872809.987007.98160K562HNRNPM
ANKRD13AENSG00000076513.121102.059501448.30290-0.394202.497001.53920K562IGF2BP2
ANKRD13AENSG00000076513.121086.580701519.03110-0.483405.702504.31310K562MATR3
ANKRD13AENSG00000076513.121846.860601395.244600.404503.047402.17480K562PCBP3
ANKRD13AENSG00000076513.121328.110701070.201200.311402.841702.02910K562POLR2G
ANKRD13AENSG00000076513.121272.789601617.59010-0.345902.753501.93490K562PPIG
ANKRD13AENSG00000076513.121199.583301478.83210-0.301902.629501.97970K562PTBP1
ANKRD13AENSG00000076513.122173.454402658.85910-0.290802.377501.62220K562PUF60
ANKRD13AENSG00000076513.121160.879801418.02790-0.288702.067901.34640K562RBM22
ANKRD13AENSG00000076513.121284.19770982.667000.386002.486201.71350K562RPS19
ANKRD13AENSG00000076513.12804.294601174.32820-0.546007.016505.61610K562SF3B4
ANKRD13AENSG00000076513.12968.066801449.74750-0.582607.669606.49900K562SRSF1
ANKRD13AENSG00000076513.12574.07900934.04000-0.702206.345304.76280K562SUPV3L1
ANKRD13AENSG00000076513.12837.325001467.24110-0.8092011.211909.63180K562TARDBP
ANKRD13AENSG00000076513.121184.879801442.51260-0.283802.265701.47340K562WDR3
ANKRD13AENSG00000076513.121746.463701500.071900.219302.549401.73450K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ANKRD13A is not available on ENCORE database.





15 RBPs can affect the splicing of ANKRD13A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEANKRD13AENSG00000076513.12chr12+110465509110465571110463546110463628110466316110466480-0.104000.000720.01596excludedK562SF3B4
SEANKRD13AENSG00000076513.12chr12+110461850110461917110456943110457133110463546110463628-0.074000.000160.00741excludedK562AKAP8L
SEANKRD13AENSG00000076513.12chr12+110456149110456293110450929110451054110456943110457133-0.134000.006380.06435excludedHepG2U2AF2
SEANKRD13AENSG00000076513.12chr12+110454192110454238110450929110451054110456943110457133-0.095000.002730.03882excludedK562PUS1
SEANKRD13AENSG00000076513.12chr12+110454192110454238110450929110451054110456149110456293-0.133000.001820.03657excludedK562U2AF1
SEANKRD13AENSG00000076513.12chr12+110461850110461917110456943110457133110463546110463628-0.068000.000330.01263excludedHepG2SF3A3
SEANKRD13AENSG00000076513.12chr12+110458912110459101110456943110457133110461850110461917-0.080000.000070.00833excludedHepG2TIAL1
SEANKRD13AENSG00000076513.12chr12+110454192110454238110450929110451054110456149110456293-0.148000.000660.01420excludedK562U2AF2
SEANKRD13AENSG00000076513.12chr12+110461850110461917110456943110457133110463546110463628-0.099000.001930.03401excludedK562U2AF2
SEANKRD13AENSG00000076513.12chr12+110465509110465571110463546110463628110466316110466447-0.098000.001310.05035excludedK562SF3B1
SEANKRD13AENSG00000076513.12chr12+1104716011104717621104684491104685631104740651104741340.124000.001860.06260includedHepG2HNRNPC
SEANKRD13AENSG00000076513.12chr12+110458912110459101110456943110457133110461850110461917-0.080000.000280.01518excludedK562PTBP1
SEANKRD13AENSG00000076513.12chr12+1104589121104591011104569431104571331104618501104619170.234000.000000.00000includedK562HNRNPC
A3SSANKRD13AENSG00000076513.12chr12+1104569191104571331104569431104571331104561491104562930.052000.017510.08520longerK562AQR
A5SSANKRD13AENSG00000076513.12chr12+1104740751104741891104740751104741331104751631104758110.077000.000900.01701longerK562AQR
MXEANKRD13AENSG00000076513.12chr12+110458912110459106110461850110461917110456943110457133110463546110463628-0.066000.000300.014592includedK562PTBP1
MXEANKRD13AENSG00000076513.12chr12+1104618501104619171104635461104636281104569431104571331104655091104655710.145000.000200.030651includedHepG2SUGP2
MXEANKRD13AENSG00000076513.12chr12+110458912110459106110461850110461917110456943110457133110463546110463628-0.071000.001240.084452includedK562NONO
MXEANKRD13AENSG00000076513.12chr12+1104589121104591061104618501104619171104569431104571331104635461104636280.052000.001380.012081includedK562AQR
MXEANKRD13AENSG00000076513.12chr12+1104589121104591061104618231104619171104569431104571331104635461104636280.088000.001520.013141includedK562AQR
MXEANKRD13AENSG00000076513.12chr12+110468449110468563110471601110471762110467282110467440110474065110474133-0.206000.001200.050072includedHepG2BCCIP
MXEANKRD13AENSG00000076513.12chr12+1104589121104591061104618501104619171104569431104571331104635461104636280.093000.000020.000791includedK562HNRNPC
MXEANKRD13AENSG00000076513.12chr12+110458912110459106110461850110461917110456943110457133110463546110463628-0.053000.000140.008022includedHepG2TIAL1
MXEANKRD13AENSG00000076513.12chr12+110458912110459106110461850110461917110456943110457133110463546110463628-0.079000.001480.076172includedK562SERBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ANKRD13A is not avaliable on ENCORE database.