AKAP13

General Information

Gene Name       : AKAP13
Gene ID             : ENSG00000170776.21
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AKAP13)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AKAP13ENSG00000170776.2135.4537.9736.71ENCSR000AEF
HepG2AKAP13ENSG00000170776.2110.528.439.47ENCSR985KAT
K562AKAP13ENSG00000170776.210.200.340.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AKAP13 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AKAP13 RNA is bound by 14 proteins.  







eCLIP assay for AKAP13 is not avaliable on ENCORE database.





14 proteins are bound to AKAP13 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr158592389385924034+5'-UTR,intron-Proximal3.175746.93667HepG2PPIG
chr158592383085923889+5'-UTR3.443448.71150HepG2NCBP2
chr158592396785924030+5'-UTR,intron-Proximal3.634833.15756HepG2EIF3H
chr158612474686124807+CDS3.089503.07152HepG2HLTF
chr158626530886265348+CDS,intron-Proximal4.381363.89826HepG2BCLAF1
chr158618260386182681+CDS,intron-Proximal3.301816.47196HepG2BCLAF1
chr158612896986129050+CDS3.028013.95327HepG2PPIG
chr158607696886077096+CDS3.602565.20984HepG2EIF3H
chr158608700086087093+CDS,intron-Proximal3.614037.26626HepG2PPIG
chr158606465986064713+CDS4.533784.04372HepG2BCLAF1
chr158623659686236685+CDS,intron-Proximal4.383478.41475HepG2BCLAF1
chr158612349486123542+CDS5.314728.40988HepG2BCLAF1
chr158612529286125339+CDS,intron-Proximal3.449513.14231HepG2EIF3H
chr158612413686124185+CDS4.180873.71264HepG2FXR2
chr158623651386236650+CDS3.464395.20920HepG2FXR2
chr158612896886129060+CDS,intron-Proximal5.2886615.86994HepG2BCLAF1
chr158607681386076856+CDS,intron-Proximal3.676663.87469HepG2BCLAF1
chr158612255486122632+CDS3.608484.70379HepG2HLTF
chr158612508986125177+CDS4.117193.34184HepG2GRWD1
chr158607688786076957+CDS4.003953.80193HepG2GRWD1
chr158612240986122501+CDS4.512879.30195HepG2BCLAF1
chr158607685686076940+CDS4.310057.82199HepG2BCLAF1
chr158612241986122493+CDS3.948054.43601HepG2EIF3H
chr158626230986262352+CDS4.136093.06595HepG2BCLAF1
chr158612224886122279+CDS3.630113.87469HepG2BCLAF1
chr158612378986123866+CDS4.480003.21205HepG2EIF3H
chr158612475386124793+CDS3.580343.87469HepG2BCLAF1
chr158612257286122643+CDS4.330997.58753HepG2EIF3H
chr158607699586077084+CDS3.326265.40132HepG2BCLAF1
chr158612896886129043+CDS4.710313.71264HepG2FXR2
chr158612220486122271+CDS5.475275.26450HepG2EIF3H
chr158623659586236681+CDS3.411964.24070HepG2GRWD1
chr158612529586125337+CDS3.756604.51739HepG2BCLAF1
chr158612479486124890+CDS4.007524.01763HepG2GRWD1
chr158626644586266524+CDS4.410584.13543HepG2FXR2
chr158619879286198896+CDS3.326266.60490HepG2BCLAF1
chr158606472986064781+CDS4.034557.65975HepG2BCLAF1
chr158608950586089592+intron-Distal4.026148.69378HepG2HNRNPL
chr158593922985939308+intron-Distal3.663114.70739HepG2HNRNPL
chr158610215086102226+intron-Distal4.711696.17200HepG2PCBP2
chr158595908485959187+intron-Distal3.982754.49332HepG2CSTF2
chr158592415885924235+intron-Distal3.011103.23466HepG2CSTF2T
chr158616453486164587+intron-Distal4.358864.31871HepG2HNRNPM
chr158620184186201964+intron-Distal,intron-Proximal5.4902010.44346HepG2QKI
chr158595126885951381+intron-Distal3.874554.38996HepG2HNRNPM
chr158612909386129225+intron-Distal,intron-Proximal4.069723.48768HepG2KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AKAP13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AKAP13 is not available on ENCORE database.

  • 99 RBPs can affect the levels of AKAP13.  








The Knockdown/knockout RNA-Seq assay for AKAP13 is not available on ENCORE database.





99 RBPs can affect the gene expression of AKAP13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AKAP13ENSG00000170776.151201.27260949.875900.338702.585701.54550HepG2AATF
AKAP13ENSG00000170776.152518.803901151.853501.1287052.6492050.81910HepG2ACO1
AKAP13ENSG00000170776.151931.211801079.759800.838709.494108.57340HepG2AKAP1
AKAP13ENSG00000170776.152115.585801157.274600.8702019.9488018.16010HepG2AKAP8L
AKAP13ENSG00000170776.151960.397001624.873900.270703.318402.57750HepG2AUH
AKAP13ENSG00000170776.152135.689201499.128300.510505.991505.15070HepG2BOP1
AKAP13ENSG00000170776.151637.431201108.205900.563107.895506.68840HepG2CALR
AKAP13ENSG00000170776.151112.93740848.782100.390802.656001.89730HepG2CIRBP
AKAP13ENSG00000170776.151378.586401151.614500.259403.113702.41740HepG2CKAP4
AKAP13ENSG00000170776.15768.971201034.33150-0.427702.242001.32780HepG2YBX3
AKAP13ENSG00000170776.151471.180001057.610900.476106.860405.93450HepG2CELF1
AKAP13ENSG00000170776.151438.650901047.706500.457404.536203.69120HepG2DDX21
AKAP13ENSG00000170776.151799.579201034.261600.799009.915708.79710HepG2DDX3X
AKAP13ENSG00000170776.151266.70560901.982400.489803.185702.36430HepG2DDX55
AKAP13ENSG00000170776.152590.986001562.877800.729204.690003.42740HepG2DDX59
AKAP13ENSG00000170776.15872.767201006.63730-0.205901.882201.32630HepG2DNAJC2
AKAP13ENSG00000170776.151405.60780854.085700.718607.709906.75640HepG2EIF2S1
AKAP13ENSG00000170776.151332.055601069.477000.316602.708901.55440HepG2EIF2S2
AKAP13ENSG00000170776.151345.46590794.311000.760208.828607.30550HepG2EIF3D
AKAP13ENSG00000170776.151464.07810943.789700.633405.626404.71510HepG2EIF4A3
AKAP13ENSG00000170776.152083.01400919.055501.1803011.4756010.12170HepG2EIF4B
AKAP13ENSG00000170776.151345.504801121.926300.262102.447301.65220HepG2EIF4G1
AKAP13ENSG00000170776.15820.473201074.75500-0.389503.023502.17330HepG2EIF4G2
AKAP13ENSG00000170776.152490.020201865.527600.416508.124707.18790HepG2ETF1
AKAP13ENSG00000170776.151748.036101125.576700.635008.249506.82100HepG2EWSR1
AKAP13ENSG00000170776.153131.566401423.423701.1374019.8206018.09920HepG2FIP1L1
AKAP13ENSG00000170776.15803.36420607.010600.404202.865202.06520HepG2FUBP3
AKAP13ENSG00000170776.151341.37520952.472200.493904.053203.22700HepG2FXR1
AKAP13ENSG00000170776.151770.68160883.437701.0030014.3545012.89580HepG2G3BP1
AKAP13ENSG00000170776.151231.56510938.039100.392702.774901.88300HepG2G3BP2
AKAP13ENSG00000170776.15936.34130707.225500.404802.823901.91590HepG2GEMIN5
AKAP13ENSG00000170776.151317.10700992.599000.408002.942301.89010HepG2GNB2L1
AKAP13ENSG00000170776.151352.112001647.57460-0.285103.265002.49090HepG2HNRNPF
AKAP13ENSG00000170776.15905.457501133.03260-0.323503.561802.88180HepG2HNRNPU
AKAP13ENSG00000170776.151340.450501622.39430-0.275402.284301.62410HepG2IGF2BP1
AKAP13ENSG00000170776.151572.16560897.952500.8079010.179208.97150HepG2IGF2BP2
AKAP13ENSG00000170776.151701.99390842.861501.013804.933003.63550HepG2IGF2BP3
AKAP13ENSG00000170776.151320.01920952.805800.470203.668502.91370HepG2MAGOH
AKAP13ENSG00000170776.151964.56670958.101401.035904.541203.75040HepG2MATR3
AKAP13ENSG00000170776.151205.47750831.304200.536103.111301.99330HepG2METAP2
AKAP13ENSG00000170776.151583.424701152.216700.458505.168104.08950HepG2MSI2
AKAP13ENSG00000170776.151572.38760980.639900.681106.995406.01010HepG2NCBP2
AKAP13ENSG00000170776.151284.57300828.385900.632802.980901.84160HepG2NONO
AKAP13ENSG00000170776.151316.69580873.185300.592505.442604.44030HepG2PABPC4
AKAP13ENSG00000170776.151430.376001121.547900.350804.412903.37270HepG2PARN
AKAP13ENSG00000170776.151213.67450885.231000.455202.428901.85140HepG2PCBP1
AKAP13ENSG00000170776.151490.97860695.667501.0997016.3649014.63030HepG2PRPF8
AKAP13ENSG00000170776.151541.12980900.807100.7746018.4074017.23060HepG2PTBP1
AKAP13ENSG00000170776.151995.741301142.721300.8044028.3113026.81370HepG2PUM1
AKAP13ENSG00000170776.152906.036801141.914601.3475043.5037041.12830HepG2PUM2
AKAP13ENSG00000170776.151285.53200975.486700.398104.399803.63860HepG2QKI
AKAP13ENSG00000170776.153165.194801147.477601.4637016.8637015.26580HepG2RAVER1
AKAP13ENSG00000170776.153030.219801559.245300.9585032.4984031.10930HepG2RBM22
AKAP13ENSG00000170776.151271.42670885.358300.522006.080505.11710HepG2RBM25
AKAP13ENSG00000170776.151607.925001002.469100.6815014.4659013.41170HepG2NELFE
AKAP13ENSG00000170776.151241.50520933.741200.410905.491104.65930HepG2RECQL
AKAP13ENSG00000170776.151197.34630772.921900.631307.947006.96860HepG2RPS19
AKAP13ENSG00000170776.151398.991901081.563900.371202.624101.84330HepG2RPS2
AKAP13ENSG00000170776.151423.468601104.074500.366502.539001.51100HepG2RPS5
AKAP13ENSG00000170776.151478.26070688.145501.1030014.7892013.22660HepG2RRP9
AKAP13ENSG00000170776.15666.295501009.03430-0.5987010.166109.05170HepG2SAFB2
AKAP13ENSG00000170776.15820.305101116.91990-0.445302.776601.46530HepG2SART3
AKAP13ENSG00000170776.151021.96010775.712200.397602.837601.88660HepG2SERBP1
AKAP13ENSG00000170776.151900.735301473.727700.367003.285902.52260HepG2SF3B1
AKAP13ENSG00000170776.151463.58930937.764300.6421012.7703011.64440HepG2SF3B4
AKAP13ENSG00000170776.151226.257501032.116000.248602.454901.78800HepG2SLBP
AKAP13ENSG00000170776.151600.875801176.736000.444008.839907.79380HepG2SMN1
AKAP13ENSG00000170776.152359.964201639.774000.525203.227502.38160HepG2SNRNP70
AKAP13ENSG00000170776.154679.930201761.126801.40990102.81650100.88230HepG2SRFBP1
AKAP13ENSG00000170776.152130.10220978.860501.1216043.7762042.39130HepG2SRSF1
AKAP13ENSG00000170776.152414.498501585.684800.606505.316703.88850HepG2SRSF3
AKAP13ENSG00000170776.151659.498701062.846100.6427010.517009.40130HepG2SRSF5
AKAP13ENSG00000170776.151452.87380796.387600.8673024.3943023.05920HepG2SRSF9
AKAP13ENSG00000170776.151850.908501529.104000.275403.707703.13330HepG2SSB
AKAP13ENSG00000170776.15776.407401031.60600-0.410002.342201.34340HepG2STIP1
AKAP13ENSG00000170776.152061.567301208.794900.7701023.7123022.18450HepG2SUCLG1
AKAP13ENSG00000170776.151931.98180897.869301.1054015.7392014.35800HepG2SUPV3L1
AKAP13ENSG00000170776.15901.68580601.785700.583304.036602.85960HepG2TFIP11
AKAP13ENSG00000170776.151347.673401101.071700.291502.560802.07640HepG2TIAL1
AKAP13ENSG00000170776.153364.054301217.755101.4659040.6075038.11110HepG2U2AF1
AKAP13ENSG00000170776.152948.353601382.067601.093003.778902.61490HepG2U2AF2
AKAP13ENSG00000170776.151908.105001113.090200.777508.598607.09520HepG2UBE2L3
AKAP13ENSG00000170776.151823.796401399.643700.381806.215405.37660HepG2UTP3
AKAP13ENSG00000170776.15785.095701062.35480-0.436302.377901.37060HepG2XPO5
AKAP13ENSG00000170776.15682.93340883.85500-0.372102.426601.74420HepG2XRN2
AKAP13ENSG00000170776.151783.178601166.378400.6123015.5122014.13290HepG2ZC3H8
AKAP13ENSG00000170776.152212.592301594.410100.4726012.0588011.11800HepG2ZNF622
AKAP13ENSG00000170776.1594.7156054.436900.798902.310701.78400K562AGGF1
AKAP13ENSG00000170776.15139.6235039.321001.828108.672907.72860K562AQR
AKAP13ENSG00000170776.1566.3602028.323201.228203.433902.64630K562EIF2S2
AKAP13ENSG00000170776.15117.4704037.760501.637204.640203.66220K562GRSF1
AKAP13ENSG00000170776.1556.8674019.653901.532704.082802.77920K562HNRNPA1
AKAP13ENSG00000170776.15100.5871020.424802.299909.925208.85110K562HNRNPC
AKAP13ENSG00000170776.1556.1512021.768601.367003.466902.46850K562HNRNPU
AKAP13ENSG00000170776.1580.8868038.091801.086302.901602.08810K562HSPD1
AKAP13ENSG00000170776.1542.5936016.614601.358102.136301.32820K562KRR1
AKAP13ENSG00000170776.1570.7062024.966101.501804.643703.61730K562MTPAP
AKAP13ENSG00000170776.1593.6408037.099701.335604.126703.10900K562PCBP3
AKAP13ENSG00000170776.1557.3408028.451701.010902.183001.47150K562POLR2G
AKAP13ENSG00000170776.15125.6530020.668102.6039012.7645011.14160K562PRPF8
AKAP13ENSG00000170776.15132.2437063.132501.066604.439803.41220K562PUF60
AKAP13ENSG00000170776.1581.7711018.506602.143502.295201.41830K562SF3B1
AKAP13ENSG00000170776.1574.8327036.873101.021003.025002.13040K562SF3B4
AKAP13ENSG00000170776.1572.0674034.377001.067802.761201.67030K562U2AF1
AKAP13ENSG00000170776.15123.6031056.956401.117703.512201.99790K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AKAP13 is not available on ENCORE database.





1 RBPs can affect the splicing of AKAP13 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAKAP13ENSG00000170776.15chr15+8620176786201821861986478619901886207793862079860.618000.001360.06490includedHepG2PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AKAP13 is not avaliable on ENCORE database.