AC007246.3

General Information

Gene Name       : AC007246.3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC007246.3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC007246.3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AC007246.3 RNA is bound by 17 proteins.  







eCLIP assay for AC007246.3 is not avaliable on ENCORE database.





17 proteins are bound to AC007246.3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr23966684139666939+intron-Distal3.747898.51339HepG2QKI
chr23981414139814183+intron-Distal,intron-Proximal4.470284.12401HepG2U2AF2
chr23975407639754194+intron-Distal3.985505.09956HepG2PTBP1
chr23966456439664677+intron-Distal,intron-Proximal4.609955.47892K562DDX3X
chr23970178839701883+intron-Distal5.052636.71516K562TARDBP
chr23970312539703149+intron-Distal4.114794.28254HepG2MATR3
chr23970176239701879+intron-Distal3.459855.24860HepG2FUBP3
chr23975947739759575+intron-Distal4.474758.08894HepG2QKI
chr23971505839715154+intron-Distal3.399084.16645HepG2HNRNPK
chr23971402639714126+intron-Distal3.185613.86883HepG2PTBP1
chr23971378839713837+intron-Distal3.201823.59395HepG2PTBP1
chr23970334239703447+intron-Distal4.1375432.35026HepG2SUGP2
chr23968442439684512+intron-Distal3.631123.54383HepG2HNRNPL
chr23968557439685640+intron-Distal3.9954723.44947HepG2HNRNPL
chr23969303139693135+intron-Distal3.9688311.67085HepG2PTBP1
chr23974735939747450+intron-Distal3.610214.45128HepG2HNRNPL
chr23976362439763692+intron-Distal3.939563.16986HepG2QKI
chr23968564639685762+intron-Distal3.218834.03313K562HNRNPL
chr23978086339780926+intron-Distal3.082983.10640HepG2SUGP2
chr23970318239703218+intron-Distal4.078125.95721HepG2MATR3
chr23970498939705039+intron-Distal5.343346.08412HepG2HNRNPM
chr23970302439703117+intron-Distal6.5791534.07685K562PTBP1
chr23972308239723212+intron-Distal5.5260631.36198HepG2PTBP1
chr23978536339785546+intron-Distal3.581364.00486HepG2HNRNPL
chr23966456739664668+intron-Distal6.2751918.41043HepG2DDX3X
chr23971506339715195+intron-Distal5.4044210.86699HepG2PCBP2
chr23970186639701932+intron-Distal4.9424211.92269HepG2QKI
chr23972293739722983+intron-Distal3.732843.00914HepG2PTBP1
chr23970353539703580+intron-Distal3.598013.93186HepG2MATR3
chr23970316339703218+intron-Distal4.0005721.03567HepG2SUGP2
chr23966553439665630+intron-Distal4.406009.85601HepG2QKI
chr23969869339698788+intron-Distal4.025125.81300HepG2HNRNPL
chr23970392639704030+intron-Distal3.7110629.42344HepG2SUGP2
chr23970471739704756+intron-Distal3.097276.29446HepG2SUGP2
chr23969878839698863+intron-Distal5.282965.64178HepG2HNRNPL
chr23979208639792143+intron-Distal3.656614.63118HepG2HNRNPM
chr23970325339703340+intron-Distal3.8406814.71600HepG2SUGP2
chr23970465139704688+intron-Distal3.171008.15994HepG2SUGP2
chr23968143339681506+intron-Distal,intron-Proximal3.106656.50801HepG2BCLAF1
chr23971386139713919+intron-Distal3.173593.45713HepG2PTBP1
chr23970345339703490+intron-Distal3.7903211.20254HepG2SUGP2
chr23976626539766394+intron-Distal3.468238.82033HepG2HNRNPL
chr23969304139693134+intron-Distal3.568333.30744K562PTBP1
chr23977676439776861+intron-Distal3.972103.59803HepG2PTBP1
chr23979149439791606+intron-Distal5.064404.64592HepG2HNRNPM
chr23976264339762742+intron-Distal4.762014.85866HepG2QKI
chr23968827539688381+intron-Distal4.858965.64178HepG2HNRNPL
chr23980747539807564+intron-Distal3.955064.33009HepG2SUGP2
chr23970554839705573+intron-Distal3.432099.30025HepG2SUGP2
chr23970302439703115+intron-Distal3.646784.03284K562MATR3
chr23970353239703600+intron-Distal3.7169622.00490HepG2SUGP2
chr23970491339704965+intron-Distal3.4748713.33830HepG2SUGP2
chr23980827639808369+intron-Distal4.972097.65425HepG2SUGP2
chr23975750739757581+intron-Distal3.310663.84494HepG2QKI
chr23970971239709780+intron-Distal4.618655.57507HepG2HNRNPL
chr23971403839714122+intron-Distal5.312065.89856K562PTBP1
chr23972308539723192+intron-Distal5.4181912.52640K562PTBP1
chr23966461839664680+intron-Distal,intron-Proximal4.226403.98353K562RBM15
chr23970321839703238+intron-Distal3.7962511.69397HepG2SUGP2
chr23971063439710723+intron-Distal4.274003.27714HepG2HNRNPL
chr23976067139760733+intron-Distal3.366933.54232HepG2HNRNPL
chr23968565839685721+intron-Distal3.6375714.72370HepG2HNRNPL
chr23979166339791807+intron-Distal3.221015.54821HepG2SUGP2
chr23970301339703122+intron-Distal4.5616255.78800HepG2PTBP1
chr23981403039814102+intron-Distal,intron-Proximal3.047816.18258HepG2U2AF2
chr23976534739765442+intron-Distal4.238194.77636HepG2HNRNPL
chr23966815839668272+intron-Distal3.220203.77546HepG2HNRNPL
chr23980749739807556+intron-Distal4.174443.62238HepG2MATR3
chr23979188239791971+intron-Distal4.855885.42395HepG2HNRNPM
chr23966456639664622+intron-Distal3.594643.77385HepG2NCBP2
chr23970499039705020+intron-Distal3.510589.46590HepG2SUGP2
chr23970581839705900+intron-Distal3.2120915.31283HepG2SUGP2
chr23974351239743592+intron-Proximal4.9164811.68762HepG2SF3A3
chr23974572539745861+intron-Proximal3.192629.17110HepG2BCLAF1
chr23974354939743600+intron-Proximal3.267183.05161HepG2PPIG
chr23974351239743605+intron-Proximal5.1275611.70021HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC007246.3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC007246.3 is not available on ENCORE database.

  • 120 RBPs can affect the levels of AC007246.3.  








The Knockdown/knockout RNA-Seq assay for AC007246.3 is not available on ENCORE database.





120 RBPs can affect the gene expression of AC007246.3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC007246.3ENSG00000231312.2167.93540409.12620-1.2846011.386109.69040HepG2ABCF1
AC007246.3ENSG00000231312.2253.47550373.35280-0.558703.997203.29140HepG2ACO1
AC007246.3ENSG00000231312.285.63510225.82990-1.3990010.138708.39210HepG2ADAR
AC007246.3ENSG00000231312.2317.87120955.29800-1.5875023.1110021.74140HepG2AKAP1
AC007246.3ENSG00000231312.2355.38950508.96960-0.518202.830601.78120HepG2AKAP8
AC007246.3ENSG00000231312.2206.88040375.17930-0.858807.119905.95340HepG2AKAP8L
AC007246.3ENSG00000231312.2344.46280790.44700-1.1983015.4809013.78500HepG2ASCC1
AC007246.3ENSG00000231312.2310.94150130.652901.250806.234904.94670HepG2BCLAF1
AC007246.3ENSG00000231312.2395.50190179.690801.1381010.665209.58910HepG2BOP1
AC007246.3ENSG00000231312.2482.34490287.006400.748904.127503.20980HepG2CALR
AC007246.3ENSG00000231312.2218.47240422.46690-0.951405.804104.36620HepG2CCAR1
AC007246.3ENSG00000231312.2205.08450750.97320-1.8725031.9304029.75690HepG2CIRBP
AC007246.3ENSG00000231312.2239.19120373.35870-0.642404.605403.78860HepG2CKAP4
AC007246.3ENSG00000231312.2234.64830404.82630-0.786803.993103.06780HepG2CNOT7
AC007246.3ENSG00000231312.2399.14610164.962101.2747012.2554010.92440HepG2CPSF6
AC007246.3ENSG00000231312.245.0043092.88730-1.045403.045201.91970HepG2CSTF2
AC007246.3ENSG00000231312.2319.43760412.78090-0.369802.178501.59760HepG2CELF1
AC007246.3ENSG00000231312.2736.23280443.829100.730105.456104.46240HepG2DAZAP1
AC007246.3ENSG00000231312.2221.76960345.33780-0.638904.052903.06730HepG2DDX19B
AC007246.3ENSG00000231312.2136.61480300.10980-1.135409.074707.91970HepG2DDX21
AC007246.3ENSG00000231312.2186.34340293.82680-0.657003.837502.75070HepG2DDX24
AC007246.3ENSG00000231312.2294.18050112.003601.3931011.564409.08350HepG2DDX28
AC007246.3ENSG00000231312.2643.14950915.14200-0.508803.686002.97420HepG2DDX3X
AC007246.3ENSG00000231312.2314.85930147.815001.090805.961904.87980HepG2DDX55
AC007246.3ENSG00000231312.2556.19350374.538200.570404.133202.90530HepG2DDX5
AC007246.3ENSG00000231312.2436.59980219.330100.993107.738706.17730HepG2DHX30
AC007246.3ENSG00000231312.2164.86700357.21990-1.1155010.466709.32150HepG2DKC1
AC007246.3ENSG00000231312.2298.74830225.382100.406501.952301.38670HepG2DNAJC2
AC007246.3ENSG00000231312.2142.74010330.57260-1.211609.302107.73540HepG2EEF2
AC007246.3ENSG00000231312.2399.30010275.578100.534903.008201.85490HepG2EFTUD2
AC007246.3ENSG00000231312.297.61150283.50280-1.5382015.1805013.07220HepG2EIF3G
AC007246.3ENSG00000231312.2436.44930835.20860-0.936309.321308.15620HepG2EIF4A3
AC007246.3ENSG00000231312.2433.93120813.10900-0.906007.164006.08440HepG2EIF4B
AC007246.3ENSG00000231312.2252.51500354.39530-0.489002.427401.40300HepG2ESF1
AC007246.3ENSG00000231312.2211.38450364.90970-0.787706.195704.94610HepG2EWSR1
AC007246.3ENSG00000231312.2571.68530286.070700.9987011.802109.72710HepG2FASTKD2
AC007246.3ENSG00000231312.2114.07510413.11540-1.8566019.7336018.01600HepG2FIP1L1
AC007246.3ENSG00000231312.2208.18980123.042400.758603.259701.88410HepG2FKBP4
AC007246.3ENSG00000231312.2359.37760566.16450-0.655705.492404.39420HepG2FUBP3
AC007246.3ENSG00000231312.2203.03960356.72850-0.813104.071002.72740HepG2FUS
AC007246.3ENSG00000231312.2291.82600842.55770-1.5297024.1209022.30280HepG2FXR1
AC007246.3ENSG00000231312.2399.31990781.66570-0.969009.370408.18140HepG2G3BP1
AC007246.3ENSG00000231312.2456.40240829.74700-0.862409.177407.54460HepG2G3BP2
AC007246.3ENSG00000231312.254.66730238.92960-2.1278018.7495016.65030HepG2GEMIN5
AC007246.3ENSG00000231312.2131.80730336.02630-1.3501011.777409.66220HepG2GNB2L1
AC007246.3ENSG00000231312.2212.39310374.75890-0.819204.608203.18150HepG2GRSF1
AC007246.3ENSG00000231312.2571.02130341.587600.741203.802902.16460HepG2HLTF
AC007246.3ENSG00000231312.2114.14530229.58570-1.008205.728604.84430HepG2HNRNPA1
AC007246.3ENSG00000231312.2771.03030407.897300.9185015.7177013.86200HepG2HNRNPA2B1
AC007246.3ENSG00000231312.2354.36770195.873200.855205.928304.93100HepG2HNRNPF
AC007246.3ENSG00000231312.2330.11130791.34420-1.2614017.9272016.30640HepG2HNRNPK
AC007246.3ENSG00000231312.2510.33480404.290800.336002.411401.77770HepG2HNRNPL
AC007246.3ENSG00000231312.2509.00050178.445801.512108.624807.57910HepG2HNRNPLL
AC007246.3ENSG00000231312.2187.35380285.02130-0.605303.295302.26510HepG2HNRNPM
AC007246.3ENSG00000231312.2330.09890192.876700.775105.559804.57170HepG2IGF2BP1
AC007246.3ENSG00000231312.2219.03900794.57090-1.8590032.6569030.65290HepG2IGF2BP2
AC007246.3ENSG00000231312.2437.28060745.57040-0.769803.010901.98420HepG2IGF2BP3
AC007246.3ENSG00000231312.2345.85640259.124700.416402.696301.97220HepG2ILF2
AC007246.3ENSG00000231312.2487.07670799.15610-0.714305.119903.71730HepG2KHSRP
AC007246.3ENSG00000231312.2237.46020847.59020-1.8357029.0720027.20090HepG2MATR3
AC007246.3ENSG00000231312.2244.51200334.33170-0.451402.239801.50870HepG2MSI2
AC007246.3ENSG00000231312.2420.29420182.014901.207204.567403.29910HepG2MTPAP
AC007246.3ENSG00000231312.2434.32990867.57320-0.9982011.2961010.05900HepG2NCBP2
AC007246.3ENSG00000231312.2326.72280440.10070-0.429802.777002.01140HepG2NOL12
AC007246.3ENSG00000231312.2296.05790158.234100.903705.437404.40510HepG2NSUN2
AC007246.3ENSG00000231312.2537.98710738.81840-0.457604.935304.16130HepG2PCBP1
AC007246.3ENSG00000231312.2297.50390226.261600.394802.017501.37910HepG2PPIL4
AC007246.3ENSG00000231312.2179.33490269.07390-0.585303.596102.72500HepG2PRPF4
AC007246.3ENSG00000231312.2134.55460355.05260-1.399808.114606.13380HepG2PRPF6
AC007246.3ENSG00000231312.2352.17280751.74500-1.0940020.7190019.48880HepG2PTBP1
AC007246.3ENSG00000231312.2245.42250445.64930-0.860608.116806.99410HepG2PUM2
AC007246.3ENSG00000231312.2243.42480380.29670-0.643604.771104.00410HepG2PUS1
AC007246.3ENSG00000231312.2730.61600524.822400.477204.285903.24600HepG2RBM15
AC007246.3ENSG00000231312.2197.91440468.81340-1.2441015.7731014.74230HepG2RBM22
AC007246.3ENSG00000231312.2326.91810738.93540-1.1765018.4834016.84360HepG2RBM25
AC007246.3ENSG00000231312.2220.65440396.88130-0.846905.468004.06010HepG2RBM27
AC007246.3ENSG00000231312.2142.55660322.28400-1.176807.325805.61570HepG2RCC2
AC007246.3ENSG00000231312.2135.12280836.64530-2.6303081.6155079.71980HepG2NELFE
AC007246.3ENSG00000231312.2232.83270779.17560-1.7427043.9755042.11400HepG2RECQL
AC007246.3ENSG00000231312.2438.03700211.039401.053409.601108.45510HepG2RPLP0
AC007246.3ENSG00000231312.2103.07720261.11860-1.3410010.897309.77430HepG2RPS19
AC007246.3ENSG00000231312.2209.84700366.04940-0.802705.106604.03990HepG2RPS2
AC007246.3ENSG00000231312.2634.72150406.545800.642603.986503.02540HepG2RPS3A
AC007246.3ENSG00000231312.2264.81580373.63580-0.496602.302501.32800HepG2RPS5
AC007246.3ENSG00000231312.2220.42810112.837900.966004.805703.80250HepG2RRP9
AC007246.3ENSG00000231312.2464.94290225.914901.0412014.3573013.05990HepG2SAFB2
AC007246.3ENSG00000231312.289.29400467.05880-2.3870029.7410027.49260HepG2SF3A3
AC007246.3ENSG00000231312.2432.45930176.619801.2918013.3783011.94750HepG2SF3B1
AC007246.3ENSG00000231312.2477.04820782.71800-0.7144010.236009.20560HepG2SF3B4
AC007246.3ENSG00000231312.2605.53560402.835300.587907.000505.96550HepG2SLBP
AC007246.3ENSG00000231312.2170.41730263.46060-0.628504.092803.33600HepG2SMN1
AC007246.3ENSG00000231312.2175.27930816.96600-2.2206065.2032063.59910HepG2SRSF1
AC007246.3ENSG00000231312.2232.06010414.80970-0.838008.391907.37780HepG2SRSF5
AC007246.3ENSG00000231312.2365.70910192.447200.926109.000707.86990HepG2SRSF7
AC007246.3ENSG00000231312.2336.82990664.62620-0.9805017.2245016.06000HepG2SRSF9
AC007246.3ENSG00000231312.2178.93460459.77090-1.3615020.5692019.45180HepG2SSB
AC007246.3ENSG00000231312.2330.30150552.14300-0.741305.593103.84930HepG2SSRP1
AC007246.3ENSG00000231312.2497.56730304.619400.707803.692802.29360HepG2SUB1
AC007246.3ENSG00000231312.2291.50220471.74900-0.694507.110706.19370HepG2SUCLG1
AC007246.3ENSG00000231312.2445.92540278.940800.676705.056703.80350HepG2SUPT6H
AC007246.3ENSG00000231312.2493.52860734.25920-0.573206.584705.78400HepG2TAF15
AC007246.3ENSG00000231312.2300.40430173.957800.788104.792303.87330HepG2TARDBP
AC007246.3ENSG00000231312.2305.82200542.33430-0.826503.572402.36610HepG2TBRG4
AC007246.3ENSG00000231312.2351.31390246.516900.511003.169502.64000HepG2TIAL1
AC007246.3ENSG00000231312.2288.00630410.44350-0.511103.099302.17010HepG2TUFM
AC007246.3ENSG00000231312.2146.25800498.41940-1.768802.942301.92140HepG2U2AF2
AC007246.3ENSG00000231312.2147.2915086.938600.760503.125302.32030HepG2UCHL5
AC007246.3ENSG00000231312.2285.30680414.21000-0.537804.362403.51870HepG2UPF1
AC007246.3ENSG00000231312.2108.57630399.90320-1.8809027.7959026.19890HepG2UTP3
AC007246.3ENSG00000231312.2549.29730364.146200.593003.345102.13070HepG2XPO5
AC007246.3ENSG00000231312.2223.74000358.42300-0.679802.942701.84770HepG2XRCC6
AC007246.3ENSG00000231312.2566.63570455.551400.314702.489901.96310HepG2ZNF622
AC007246.3ENSG00000231312.2116.74510259.80870-1.154107.303006.19600K562AKAP8L
AC007246.3ENSG00000231312.233.9756094.57620-1.477004.424803.71490K562AQR
AC007246.3ENSG00000231312.2184.35690272.60640-0.564303.059602.09900K562ATP5C1
AC007246.3ENSG00000231312.258.1588025.386001.195902.429301.61730K562BOP1
AC007246.3ENSG00000231312.266.22800137.50640-1.054004.268603.04810K562CELF1
AC007246.3ENSG00000231312.2107.9189047.699501.177803.499701.33620K562DAZAP1
AC007246.3ENSG00000231312.2159.22400292.94650-0.879605.919003.74850K562DDX19B
AC007246.3ENSG00000231312.2135.8662067.963100.999304.572603.18590K562DDX3X
AC007246.3ENSG00000231312.2146.5226054.435801.428408.156407.02060K562EIF2S2
AC007246.3ENSG00000231312.253.2857023.274901.194902.464701.60330K562FTO
AC007246.3ENSG00000231312.242.4990073.84920-0.797201.851701.33680K562FXR1
AC007246.3ENSG00000231312.289.0086033.258601.420104.749103.49750K562HNRNPM
AC007246.3ENSG00000231312.2173.6956054.813001.663909.910808.43460K562HSPD1
AC007246.3ENSG00000231312.2175.72280275.71350-0.649903.147302.26330K562KIF1C
AC007246.3ENSG00000231312.242.7316092.54850-1.114904.023802.89560K562MATR3
AC007246.3ENSG00000231312.2196.59720308.86990-0.651804.022502.89140K562MBNL1
AC007246.3ENSG00000231312.2120.36440216.49620-0.846903.381502.38700K562NAA15
AC007246.3ENSG00000231312.2221.60270127.148200.801404.162702.97690K562PUM2
AC007246.3ENSG00000231312.2133.91280257.64170-0.944105.522504.78680K562PUS1
AC007246.3ENSG00000231312.2106.64030251.04730-1.235209.330808.26500K562RBM15
AC007246.3ENSG00000231312.219.7843046.85090-1.243702.259201.36850K562RCC2
AC007246.3ENSG00000231312.252.6957088.33610-0.745301.926301.32340K562SRSF1
AC007246.3ENSG00000231312.2153.9904067.580001.188103.483302.68300K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC007246.3 is not available on ENCORE database.





9 RBPs can affect the splicing of AC007246.3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAC007246.3ENSG00000231312.2chr2+3981558839815707397458153974585139826505398266790.206000.000600.05383includedHepG2G3BP1
SEAC007246.3ENSG00000231312.2chr2+3981558839815707397458153974585139826505398266790.269000.000060.00275includedHepG2HNRNPK
SEAC007246.3ENSG00000231312.2chr2+3981558839815707397458153974585139826505398266790.182000.000040.00681includedHepG2DDX3X
SEAC007246.3ENSG00000231312.2chr2+3978512239785187397457233974585139826505398266790.216000.000980.05548includedHepG2NCBP2
SEAC007246.3ENSG00000231312.2chr2+397851223978518739745723397458513981558839815707-0.266000.000920.04808excludedHepG2PTBP1
SEAC007246.3ENSG00000231312.2chr2+3981558839815707397458153974585139826505398266790.280000.000250.01431includedHepG2MATR3
SEAC007246.3ENSG00000231312.2chr2+397016673970176839681437396815063974355439743682-0.466000.000000.00001excludedHepG2TIAL1
SEAC007246.3ENSG00000231312.2chr2+3981558839815707397458153974585139826505398266790.266000.000030.00266includedHepG2PCBP1
SEAC007246.3ENSG00000231312.2chr2+3981558839815707397458153974585139826505398266790.242000.000010.00407includedHepG2KHSRP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AC007246.3 is not avaliable on ENCORE database.