AAGAB

General Information

Gene Name       : AAGAB
Gene ID             : ENSG00000103591.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AAGAB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AAGABENSG00000103591.1226.8926.1626.52ENCSR000AEF
HepG2AAGABENSG00000103591.1224.2726.7625.52ENCSR985KAT
K562AAGABENSG00000103591.1240.0939.2139.65ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AAGAB is not avaliable on ENCORE database.



Proteins bound to RNA
  • AAGAB RNA is bound by 11 proteins.  







eCLIP assay for AAGAB is not avaliable on ENCORE database.





11 proteins are bound to AAGAB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr156749414767494240-3'-UTR,intron-Distal4.2340012.51903K562FAM120A
chr156752902967529082-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.767714.84938K562DDX3X
chr156749469567494776-3'-UTR,intron-Distal3.328807.44878K562YBX3
chr156749463467494639-3'-UTR,intron-Distal4.3356113.19940K562YBX3
chr156752902567529073-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.118854.55095K562YBX3
chr156749407467494121-3'-UTR,intron-Distal5.9424814.45346K562UPF1
chr156749464667494773-3'-UTR,intron-Distal3.884669.46089K562FAM120A
chr156749462767494634-3'-UTR,intron-Distal3.704598.21916K562YBX3
chr156749484567494911-3'-UTR,intron-Distal4.014103.07287K562TIA1
chr156749463967494661-3'-UTR,intron-Distal4.4514815.57981K562YBX3
chr156749440267494476-3'-UTR,intron-Distal6.0442131.46202K562UPF1
chr156749466167494672-3'-UTR,intron-Distal5.7465014.11901K562YBX3
chr156749432567494373-3'-UTR,intron-Distal3.502645.33418K562FAM120A
chr156749476667494913-3'-UTR,intron-Distal3.5746929.42274K562UPF1
chr156749356067493621-3'-UTR,intron-Distal4.630339.04751K562UPF1
chr156749491667494983-3'-UTR,intron-Distal,intron-Proximal3.664047.02738K562LIN28B
chr156749447667494529-3'-UTR,intron-Distal4.7918916.89979K562UPF1
chr156749414167494219-3'-UTR,intron-Distal3.9819116.21043K562UPF1
chr156749405067494119-3'-UTR,intron-Distal3.2174910.00565K562FAM120A
chr156752908267529141-3'-UTR,5'-UTR,CDS,intron-Distal4.2852010.58311K562DDX3X
chr156752914167529158-3'-UTR,5'-UTR,CDS,intron-Distal4.554807.63469K562DDX3X
chr156754689467546905-5'-UTR,CDS,intron-Distal5.4927212.24622K562DDX3X
chr156754690567546928-5'-UTR,CDS,intron-Distal4.5067317.15403K562DDX3X
chr156754692867546982-5'-UTR,CDS,intron-Distal3.8596813.96142K562DDX3X
chr156752416667524205-CDS,intron-Distal,intron-Proximal3.939333.65750K562YBX3
chr156752414367524217-CDS,intron-Distal,intron-Proximal3.413315.04943K562ZNF622
chr156750184567501923-CDS,intron-Distal,intron-Proximal4.869655.58150K562SF3B4
chr156749778267497898-intron-Distal5.220767.34317K562PTBP1
chr156754493867545029-intron-Distal3.991284.22415K562PTBP1
chr156754637567546605-intron-Distal3.440584.76825K562KHSRP
chr156749626867496381-intron-Distal,intron-Proximal3.598684.06013K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AAGAB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AAGAB is not available on ENCORE database.

  • 109 RBPs can affect the levels of AAGAB.  








The Knockdown/knockout RNA-Seq assay for AAGAB is not available on ENCORE database.





109 RBPs can affect the gene expression of AAGAB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AAGABENSG00000103591.8857.63220339.136001.3384034.9686033.39700HepG2ACO1
AAGABENSG00000103591.8307.64920434.36150-0.497602.910601.88910HepG2ADAR
AAGABENSG00000103591.81847.07040367.091102.3309055.3992053.50290HepG2AKAP1
AAGABENSG00000103591.8476.79230340.729000.484602.507901.77370HepG2AKAP8L
AAGABENSG00000103591.8528.73200303.735500.799606.392005.22100HepG2ASCC1
AAGABENSG00000103591.8338.52130705.48790-1.0594019.3023017.79390HepG2AUH
AAGABENSG00000103591.8404.06860775.11040-0.9398011.4740010.36740HepG2BOP1
AAGABENSG00000103591.8825.81010492.176300.746502.729001.96270HepG2CALR
AAGABENSG00000103591.8435.00310250.431500.796503.712501.48370HepG2CDC40
AAGABENSG00000103591.8699.61620288.570101.2775016.6225014.92130HepG2CIRBP
AAGABENSG00000103591.8588.37620339.061900.7951011.4405010.27540HepG2CKAP4
AAGABENSG00000103591.8635.32430270.370001.2325010.004508.58200HepG2CNOT7
AAGABENSG00000103591.8400.28490711.60930-0.830108.409807.26630HepG2CPSF6
AAGABENSG00000103591.8465.55470285.480100.705504.092002.32480HepG2CSTF2T
AAGABENSG00000103591.8859.07220620.797900.468605.088604.26500HepG2CELF1
AAGABENSG00000103591.8416.26060667.57350-0.6814010.033808.76150HepG2DAZAP1
AAGABENSG00000103591.8244.25570313.65200-0.360802.138601.39780HepG2DDX19B
AAGABENSG00000103591.8561.22250307.865400.866208.588407.46280HepG2DDX21
AAGABENSG00000103591.8414.23490301.132800.459902.659401.76520HepG2DDX24
AAGABENSG00000103591.81320.44810351.642101.9087040.7552038.63760HepG2DDX3X
AAGABENSG00000103591.8772.03950569.420600.439102.945002.15110HepG2DDX55
AAGABENSG00000103591.8563.20600302.075900.898707.207106.24930HepG2DDX6
AAGABENSG00000103591.8274.44420421.85130-0.620203.747402.61340HepG2DHX30
AAGABENSG00000103591.8463.14610324.461100.513304.002303.21720HepG2DKC1
AAGABENSG00000103591.8290.57100437.37560-0.590004.848703.94040HepG2DNAJC21
AAGABENSG00000103591.8442.93800303.405800.545803.012602.05130HepG2EEF2
AAGABENSG00000103591.8432.33610290.637700.572804.048602.76960HepG2EIF3G
AAGABENSG00000103591.8492.47440320.905500.617803.783603.04090HepG2EIF4A3
AAGABENSG00000103591.8596.52030312.454000.932806.679405.64240HepG2EIF4B
AAGABENSG00000103591.8255.58950630.85630-1.3035017.9141015.98520HepG2EIF4G2
AAGABENSG00000103591.81030.40800809.995400.347103.716803.03760HepG2ETF1
AAGABENSG00000103591.8646.07640331.396100.963006.467305.19160HepG2EWSR1
AAGABENSG00000103591.8848.51070472.930500.843207.657906.44420HepG2FIP1L1
AAGABENSG00000103591.8653.56450323.792001.0132010.482809.22070HepG2FXR1
AAGABENSG00000103591.8526.04280300.358400.808404.039903.24460HepG2G3BP1
AAGABENSG00000103591.8123.34850806.70790-2.7093053.3772050.99830HepG2GPKOW
AAGABENSG00000103591.8429.73480323.777500.408302.958701.95230HepG2HDGF
AAGABENSG00000103591.8654.15290388.586500.751304.035502.33930HepG2HLTF
AAGABENSG00000103591.8443.37390798.60310-0.8490014.0434012.59440HepG2HNRNPF
AAGABENSG00000103591.8403.41590304.154500.407401.924101.33590HepG2HNRNPK
AAGABENSG00000103591.8438.72840608.12760-0.471005.013604.12700HepG2HNRNPL
AAGABENSG00000103591.8283.07780769.85230-1.4434017.1994015.81950HepG2HNRNPLL
AAGABENSG00000103591.8550.91220326.360400.755307.521306.07070HepG2HNRNPM
AAGABENSG00000103591.8267.19990487.91690-0.8687010.840809.70760HepG2HNRNPU
AAGABENSG00000103591.8438.36400786.40030-0.8431011.246409.88240HepG2IGF2BP1
AAGABENSG00000103591.8764.40250305.305501.3240018.3211016.76350HepG2IGF2BP2
AAGABENSG00000103591.8826.48110286.524901.528208.644506.97650HepG2IGF2BP3
AAGABENSG00000103591.8389.50260498.39030-0.355602.821402.08270HepG2ILF2
AAGABENSG00000103591.81158.92700743.406500.640504.963203.83840HepG2LARP4
AAGABENSG00000103591.8648.73910323.905101.0020010.208508.97270HepG2MAGOH
AAGABENSG00000103591.81045.00370325.716101.6817027.4488025.63860HepG2MATR3
AAGABENSG00000103591.8492.96440382.852200.364602.130601.41610HepG2MSI2
AAGABENSG00000103591.8567.88650785.05480-0.467202.341601.45600HepG2MTPAP
AAGABENSG00000103591.8778.94990333.386901.2242015.0617013.66380HepG2NCBP2
AAGABENSG00000103591.8840.34330661.961100.344102.684501.93230HepG2NOL12
AAGABENSG00000103591.8491.69320682.58990-0.473303.241502.43350HepG2NSUN2
AAGABENSG00000103591.8609.90260482.949100.336602.548101.73230HepG2PARN
AAGABENSG00000103591.8500.66150309.329300.694607.473506.55440HepG2PCBP1
AAGABENSG00000103591.8276.69930435.18220-0.653305.843904.80430HepG2PPIL4
AAGABENSG00000103591.8590.30460403.613400.548402.714101.50640HepG2PRPF6
AAGABENSG00000103591.8635.60270439.461500.532304.017903.06680HepG2PRPF8
AAGABENSG00000103591.8706.98110314.765301.1673021.9342020.67620HepG2PTBP1
AAGABENSG00000103591.81027.93630670.750200.6158011.3673010.33600HepG2PUM1
AAGABENSG00000103591.8482.62890345.431900.482404.178003.44810HepG2PUS1
AAGABENSG00000103591.8492.99190340.874900.532204.019903.28630HepG2QKI
AAGABENSG00000103591.8594.71020467.646100.346702.235801.45460HepG2RBM15
AAGABENSG00000103591.81807.89540677.006101.4170050.1024048.43220HepG2RBM22
AAGABENSG00000103591.8429.85650309.374800.474402.955202.26190HepG2RBM25
AAGABENSG00000103591.8795.72300350.294301.1836010.693809.75870HepG2NELFE
AAGABENSG00000103591.8452.19280326.268300.470803.442502.76470HepG2RECQL
AAGABENSG00000103591.8631.42610860.22710-0.446103.364602.62190HepG2RPLP0
AAGABENSG00000103591.8515.39730239.659701.1046010.227009.13380HepG2RPS19
AAGABENSG00000103591.8720.05120469.572000.616705.020803.96140HepG2RPS2
AAGABENSG00000103591.8633.22270479.330000.401602.412801.41430HepG2RPS5
AAGABENSG00000103591.8252.32120434.50920-0.784108.439107.40470HepG2SAFB2
AAGABENSG00000103591.8166.90130255.48790-0.614302.753801.44650HepG2SART3
AAGABENSG00000103591.81013.60920420.431201.2695015.2868013.62770HepG2SF3A3
AAGABENSG00000103591.8772.90580327.691301.2379024.6319023.16690HepG2SF3B4
AAGABENSG00000103591.8383.08000605.83420-0.661308.475507.35210HepG2SLBP
AAGABENSG00000103591.8822.47520506.707100.6987012.0749010.87810HepG2SMN1
AAGABENSG00000103591.81251.86910342.047001.8717068.7416067.10860HepG2SRSF1
AAGABENSG00000103591.8551.95170819.87230-0.570903.725302.54530HepG2SRSF3
AAGABENSG00000103591.8481.79840784.58630-0.7035010.066808.88340HepG2SRSF7
AAGABENSG00000103591.8491.54460663.89940-0.433604.208403.60410HepG2SSB
AAGABENSG00000103591.81005.81680709.529700.503307.297606.36850HepG2SUCLG1
AAGABENSG00000103591.8226.77300319.42530-0.494202.266801.41110HepG2SUPT6H
AAGABENSG00000103591.8534.20280750.25300-0.490003.591602.77870HepG2TARDBP
AAGABENSG00000103591.8260.61100474.08710-0.863309.006508.19590HepG2TIAL1
AAGABENSG00000103591.8665.25740404.614400.717304.413803.62910HepG2U2AF1
AAGABENSG00000103591.8866.42720359.981201.2671025.2607023.72840HepG2UTP3
AAGABENSG00000103591.8695.27890407.456000.770805.375703.92340HepG2XRCC6
AAGABENSG00000103591.8247.72230410.07330-0.727207.629106.83810HepG2ZNF622
AAGABENSG00000103591.82538.888601980.851300.358003.409702.68270K562AKAP8L
AAGABENSG00000103591.82386.121202932.30080-0.297402.756801.51940K562APOBEC3C
AAGABENSG00000103591.82670.985803477.48640-0.380704.345501.88780K562AUH
AAGABENSG00000103591.8943.427301693.63070-0.844103.110402.18390K562BOP1
AAGABENSG00000103591.82779.947102033.853400.450703.460302.01530K562CIRBP
AAGABENSG00000103591.81954.850902445.00710-0.322804.295002.89590K562CPEB4
AAGABENSG00000103591.82605.302502131.661800.289403.595902.58040K562DKC1
AAGABENSG00000103591.8994.424301329.37810-0.418802.427901.57440K562EFTUD2
AAGABENSG00000103591.81202.410601501.25680-0.320203.713002.29290K562EIF2S1
AAGABENSG00000103591.82723.156703323.13300-0.287303.483402.43220K562EIF4G2
AAGABENSG00000103591.81455.026601779.86890-0.290703.058001.85770K562GLRX3
AAGABENSG00000103591.8508.905601719.64230-1.756607.773406.43820K562GPKOW
AAGABENSG00000103591.81578.295502866.11210-0.8607017.8542015.87140K562GRSF1
AAGABENSG00000103591.81148.427601590.99470-0.470303.730703.05020K562HNRNPC
AAGABENSG00000103591.81850.907302286.31990-0.304802.810901.74440K562HNRNPL
AAGABENSG00000103591.82214.893301558.476000.507004.529003.31550K562HNRNPM
AAGABENSG00000103591.81394.823002064.09170-0.5654010.136508.44590K562HNRNPU
AAGABENSG00000103591.82722.732702102.247600.373003.935302.92930K562KIF1C
AAGABENSG00000103591.81582.353001871.30330-0.242002.879802.05500K562MTPAP
AAGABENSG00000103591.82256.558501650.705400.450902.114001.36580K562NAA15
AAGABENSG00000103591.81634.035102079.16820-0.347607.200906.07910K562NSUN2
AAGABENSG00000103591.82274.978101774.598800.358302.816901.82910K562PCBP2
AAGABENSG00000103591.81826.435401293.631400.497505.215704.18620K562PRPF8
AAGABENSG00000103591.82840.007001964.602500.531606.004105.24170K562PUS1
AAGABENSG00000103591.82420.456101914.091800.338504.178203.46560K562RBM15
AAGABENSG00000103591.81698.139901317.897000.365602.591901.80310K562RPS19
AAGABENSG00000103591.8667.962801233.40740-0.884807.107505.24200K562SRFBP1
AAGABENSG00000103591.82303.338601899.421600.278102.541501.85950K562SRSF1
AAGABENSG00000103591.81032.354502719.35040-1.3973011.676108.57490K562STIP1
AAGABENSG00000103591.8916.953601252.85060-0.450303.026201.96150K562SUPV3L1
AAGABENSG00000103591.81349.769901922.48930-0.510305.299304.30250K562TARDBP
AAGABENSG00000103591.81413.213401854.41840-0.392004.316003.26020K562TIA1
AAGABENSG00000103591.8525.021601372.01980-1.3859014.2579012.01540K562TIAL1
AAGABENSG00000103591.81005.026801325.82010-0.399702.618501.63010K562UCHL5
AAGABENSG00000103591.81520.446201886.39360-0.311102.885401.99110K562WDR3
AAGABENSG00000103591.82616.797903307.87790-0.338103.328402.37020K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AAGAB is not available on ENCORE database.





12 RBPs can affect the splicing of AAGAB :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAAGABENSG00000103591.8chr15-674958856749593567494044674952366749638167496486-0.157000.000000.00000excludedK562SF3B4
SEAAGABENSG00000103591.8chr15-674958856749593567495077674952366749638167496486-0.110000.000000.00042excludedK562PRPF8
SEAAGABENSG00000103591.8chr15-674958856749593567494044674952366749638167496486-0.262000.000000.00000excludedHepG2U2AF1
SEAAGABENSG00000103591.8chr15-674958856749593567494044674952366749638167496486-0.351000.000000.00000excludedHepG2U2AF2
SEAAGABENSG00000103591.8chr15-674958856749593567494010674952366749638167496486-0.244000.000000.00000excludedK562AQR
SEAAGABENSG00000103591.8chr15-674973566749738467496381674964866750089967500996-0.077000.000370.05809excludedK562DROSHA
SEAAGABENSG00000103591.8chr15-674958856749593567494044674952366749638167496486-0.080000.000010.00616excludedK562BUD13
SEAAGABENSG00000103591.8chr15-674973566749738467496381674964866750089967500996-0.090000.000000.00259excludedK562LARP4
SEAAGABENSG00000103591.8chr15-674958856749593567495077674952366749638167496486-0.097000.000000.00000excludedK562U2AF1
SEAAGABENSG00000103591.8chr15-674958856749593567495077674952366749638167496486-0.166000.000920.02873excludedHepG2SF3A3
SEAAGABENSG00000103591.8chr15-674973566749738467496381674964866750089967500996-0.078000.000390.03397excludedK562HNRNPUL1
SEAAGABENSG00000103591.8chr15-674958856749593567494044674952366749638167496486-0.146000.000000.00000excludedK562U2AF2
SEAAGABENSG00000103591.8chr15-674958856749593567495077674952366749638167496486-0.189000.000000.00000excludedK562SF3B1
SEAAGABENSG00000103591.8chr15-674958856749593567495077674952366749638167496486-0.063000.000560.01176excludedK562HNRNPC
MXEAAGABENSG00000103591.8chr15-6749638167496486675008996750099667493370674952366750179967501882-0.171000.000000.000002includedK562AQR
MXEAAGABENSG00000103591.8chr15-6749638167496486675017996750188267493370674952366752415167524235-0.161000.000000.000002includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AAGAB is not avaliable on ENCORE database.