ZNF248

General Information

Gene Name       : ZNF248
Gene ID             : ENSG00000198105.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF248)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF248ENSG00000198105.139.496.407.95ENCSR000AEF
HepG2ZNF248ENSG00000198105.138.4412.5210.48ENCSR985KAT
K562ZNF248ENSG00000198105.136.996.856.92ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF248 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF248 RNA is bound by 16 proteins.  







eCLIP assay for ZNF248 is not avaliable on ENCORE database.





16 proteins are bound to ZNF248 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr103812008338120120-3'-UTR,intron-Distal,intron-Proximal4.480334.37348HepG2BCLAF1
chr103811769038117764-3'-UTR,intron-Distal,intron-Proximal,polyA_site3.302373.50680HepG2CSTF2
chr103814522838145282-5'-UTR,CDS,intron-Distal,intron-Proximal3.692386.16549HepG2U2AF2
chr103814645338146561-5'-UTR,intron-Distal,intron-Proximal3.6271910.01011HepG2NCBP2
chr103812654038126574-CDS,intron-Distal,intron-Proximal3.774866.81385HepG2BCLAF1
chr103812200338122042-CDS,intron-Distal3.740165.56491HepG2BCLAF1
chr103812108538121124-CDS,intron-Distal3.570614.17155HepG2BCLAF1
chr103812057338120657-CDS,intron-Distal3.520394.90436HepG2HLTF
chr103812081838120880-CDS,intron-Distal3.782444.70379HepG2HLTF
chr103812657438126641-CDS,intron-Distal,intron-Proximal3.5706110.92329HepG2BCLAF1
chr103812691238126934-CDS,intron-Distal,intron-Proximal3.620223.32039HepG2PPIG
chr103812691238127001-CDS,intron-Distal,intron-Proximal3.202323.12941K562UCHL5
chr103812082138120884-CDS,intron-Distal4.194755.35703HepG2BCLAF1
chr103812115438121190-CDS,intron-Distal3.267573.34920HepG2HLTF
chr103812657838126642-CDS,intron-Distal,intron-Proximal3.543454.22917HepG2PPIG
chr103812690938126949-CDS,intron-Distal,intron-Proximal3.533518.74800HepG2BCLAF1
chr103812193138122000-CDS,intron-Distal,intron-Proximal3.215078.02162HepG2BCLAF1
chr103812451538124608-intron-Distal5.424759.85976HepG2PTBP1
chr103810999838110080-intron-Distal,intron-Proximal3.396675.46211HepG2HLTF
chr103814130338141380-intron-Distal3.810666.06017HepG2QKI
chr103810838738108436-intron-Distal3.532833.34920HepG2HLTF
chr103810362638103685-intron-Distal3.136053.08145HepG2HLTF
chr103812725438127304-intron-Distal3.436383.55754HepG2U2AF2
chr103811509338115151-intron-Distal4.669266.37635HepG2HNRNPL
chr103814284138142984-intron-Distal3.603655.34873K562KHSRP
chr103810779038107874-intron-Distal3.176245.86900HepG2HLTF
chr103812731438127397-intron-Distal4.008313.16986HepG2QKI
chr103810735338107404-intron-Distal3.390125.11909HepG2HLTF
chr103810647938106540-intron-Distal3.089144.56843HepG2HLTF
chr103810935738109408-intron-Distal3.630013.61820HepG2HLTF
chr103812836638128456-intron-Distal4.054683.46495K562TARDBP
chr103814369438143746-intron-Distal4.118184.28663HepG2SUGP2
chr103810654038106590-intron-Distal3.136053.07152HepG2HLTF
chr103814137838141450-intron-Distal3.079303.23948HepG2HNRNPK
chr103812853038128640-intron-Distal4.454888.11138K562KHSRP
chr103811084638110887-intron-Distal4.143373.60235HepG2HNRNPM
chr103810946038109521-intron-Distal4.026736.22361HepG2HLTF
chr103814360538143665-intron-Distal3.931034.10688K562KHSRP
chr103814305338143141-intron-Distal3.046343.68839K562KHSRP
chr103813747338137520-intron-Distal4.440365.26580HepG2HNRNPC
chr103813568938135807-intron-Distal3.062553.28806K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF248 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF248 is not available on ENCORE database.

  • 94 RBPs can affect the levels of ZNF248.  








The Knockdown/knockout RNA-Seq assay for ZNF248 is not available on ENCORE database.





94 RBPs can affect the gene expression of ZNF248 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF248ENSG00000198105.7459.90030578.74540-0.331602.607702.01430HepG2ACO1
ZNF248ENSG00000198105.7345.60790749.78640-1.1173011.4456010.43550HepG2AKAP1
ZNF248ENSG00000198105.7403.16440589.27360-0.547602.906801.84370HepG2AKAP8
ZNF248ENSG00000198105.7442.08310581.37870-0.395203.292902.46420HepG2AKAP8L
ZNF248ENSG00000198105.7357.83030620.37050-0.793906.884505.67080HepG2ASCC1
ZNF248ENSG00000198105.7869.17820697.045800.318302.807302.11680HepG2AUH
ZNF248ENSG00000198105.7560.31100397.368400.495702.416101.57760HepG2BCLAF1
ZNF248ENSG00000198105.7288.10660580.23800-1.0100011.067209.97430HepG2BOP1
ZNF248ENSG00000198105.7442.36350589.39940-0.414002.372101.65110HepG2CIRBP
ZNF248ENSG00000198105.7307.20880532.69660-0.794106.722105.68570HepG2CPSF6
ZNF248ENSG00000198105.7346.75420504.16140-0.540003.797502.50710HepG2CPSF7
ZNF248ENSG00000198105.7331.82410474.96920-0.517404.111802.86680HepG2YBX3
ZNF248ENSG00000198105.7134.87030282.53120-1.066805.058003.66260HepG2CSTF2
ZNF248ENSG00000198105.7582.00390716.66200-0.300302.222501.63570HepG2CELF1
ZNF248ENSG00000198105.7399.18890535.20910-0.423004.000903.02030HepG2DDX19B
ZNF248ENSG00000198105.7365.94600718.20680-0.9728010.127008.99620HepG2DDX3X
ZNF248ENSG00000198105.7352.23050617.02950-0.808806.415305.50480HepG2DDX6
ZNF248ENSG00000198105.7325.90880466.41690-0.517204.155303.30820HepG2DNAJC21
ZNF248ENSG00000198105.7265.50150513.66310-0.952108.270206.77110HepG2EEF2
ZNF248ENSG00000198105.7424.77020593.09100-0.481602.905302.29810HepG2EIF2S1
ZNF248ENSG00000198105.7301.56970416.96840-0.467402.255401.43130HepG2EIF3D
ZNF248ENSG00000198105.7412.43030655.39930-0.668204.760003.92450HepG2EIF4A3
ZNF248ENSG00000198105.7324.03530638.19190-0.977807.482406.38090HepG2EIF4B
ZNF248ENSG00000198105.7290.96900565.44610-0.9585011.359709.69610HepG2EWSR1
ZNF248ENSG00000198105.7463.86060661.37930-0.511803.360902.60220HepG2FXR1
ZNF248ENSG00000198105.7419.25280613.46900-0.549203.598902.84400HepG2G3BP1
ZNF248ENSG00000198105.7438.65320651.35080-0.570404.114303.01910HepG2G3BP2
ZNF248ENSG00000198105.7179.58370371.25300-1.047708.349406.83810HepG2GEMIN5
ZNF248ENSG00000198105.7235.97240603.87080-1.3556015.3342013.94550HepG2GPKOW
ZNF248ENSG00000198105.7357.35200539.15210-0.593303.035601.37910HepG2GTF2F1
ZNF248ENSG00000198105.7387.25270523.75650-0.435602.536601.87040HepG2HNRNPC
ZNF248ENSG00000198105.7407.36790621.32670-0.609004.639403.75370HepG2HNRNPK
ZNF248ENSG00000198105.7445.31940641.86990-0.527402.941401.66910HepG2HSPD1
ZNF248ENSG00000198105.7368.53250623.55740-0.758706.540205.54190HepG2IGF2BP2
ZNF248ENSG00000198105.7416.42150531.46670-0.351903.120102.34540HepG2ILF2
ZNF248ENSG00000198105.7361.38800528.98170-0.549704.545003.24900HepG2KIF1C
ZNF248ENSG00000198105.7265.50100454.95150-0.777006.526904.81390HepG2LARP7
ZNF248ENSG00000198105.7315.87840477.66930-0.596604.168202.67750HepG2LIN28B
ZNF248ENSG00000198105.7468.79110661.61070-0.497003.229802.52150HepG2MAGOH
ZNF248ENSG00000198105.7257.16340385.22350-0.583003.715301.85380HepG2MARK2
ZNF248ENSG00000198105.7284.95960665.29590-1.2232013.1847011.88170HepG2MATR3
ZNF248ENSG00000198105.7182.45100436.38680-1.258107.754006.08560HepG2METAP2
ZNF248ENSG00000198105.7643.58170500.310000.363202.221801.49250HepG2MSI2
ZNF248ENSG00000198105.7517.99630680.95300-0.394602.158001.59600HepG2NCBP2
ZNF248ENSG00000198105.7296.58550411.36370-0.472002.754401.34040HepG2NIP7
ZNF248ENSG00000198105.7549.78470764.11180-0.474904.558603.58000HepG2NOL12
ZNF248ENSG00000198105.7146.21740311.69830-1.092006.459504.11230HepG2PA2G4
ZNF248ENSG00000198105.7262.98740436.85120-0.732103.506202.49930HepG2PABPC1
ZNF248ENSG00000198105.7178.83350344.82460-0.947208.266506.24200HepG2PKM
ZNF248ENSG00000198105.7368.95400464.06420-0.330902.045701.40330HepG2PPIL4
ZNF248ENSG00000198105.7619.67440426.249300.539705.621904.55990HepG2PRPF4
ZNF248ENSG00000198105.7732.82960613.233800.256901.934001.46140HepG2PTBP1
ZNF248ENSG00000198105.7269.77620729.41200-1.4350024.2965022.76720HepG2PUF60
ZNF248ENSG00000198105.7524.08520774.30340-0.563108.030607.12970HepG2PUM1
ZNF248ENSG00000198105.7349.84190773.73760-1.1451019.0091017.34570HepG2PUM2
ZNF248ENSG00000198105.7886.42920664.063000.416603.937403.20990HepG2QKI
ZNF248ENSG00000198105.7335.59070522.87600-0.639802.417201.75520HepG2RAVER1
ZNF248ENSG00000198105.7179.46340320.73910-0.837704.719202.39930HepG2RBM14
ZNF248ENSG00000198105.7629.11940810.10810-0.364803.053702.15670HepG2RBM15
ZNF248ENSG00000198105.7837.64920668.912700.324402.404101.91160HepG2RBM22
ZNF248ENSG00000198105.71127.16360602.711700.9031014.8449013.34940HepG2RBM25
ZNF248ENSG00000198105.7271.70720548.60090-1.013709.983608.07400HepG2RBM27
ZNF248ENSG00000198105.7445.78680682.43750-0.614306.496605.72660HepG2NELFE
ZNF248ENSG00000198105.7178.45650405.74150-1.1850012.6295011.43060HepG2RPS19
ZNF248ENSG00000198105.7349.49310516.47100-0.563403.764602.50020HepG2RPS5
ZNF248ENSG00000198105.7260.42570407.20440-0.644904.125802.98150HepG2SERBP1
ZNF248ENSG00000198105.7471.64180759.23190-0.686804.851203.94320HepG2SF3A3
ZNF248ENSG00000198105.7393.18250638.38460-0.699208.027807.10220HepG2SF3B4
ZNF248ENSG00000198105.7423.59060540.36590-0.351302.886902.23120HepG2SMN1
ZNF248ENSG00000198105.7412.08890634.68520-0.623103.194302.35340HepG2SNRNP70
ZNF248ENSG00000198105.7440.20220720.18850-0.710209.806008.72370HepG2SRSF5
ZNF248ENSG00000198105.7424.04340542.14780-0.354502.595902.05750HepG2SRSF9
ZNF248ENSG00000198105.7910.46630655.950600.472904.329103.71780HepG2SSB
ZNF248ENSG00000198105.7646.97290819.05240-0.340303.389402.71420HepG2SUCLG1
ZNF248ENSG00000198105.7311.66360417.42090-0.421502.271601.41460HepG2SUPT6H
ZNF248ENSG00000198105.7399.48210505.62300-0.339902.050501.60670HepG2TIAL1
ZNF248ENSG00000198105.7289.88350510.07920-0.8152010.367009.37940HepG2TRIM56
ZNF248ENSG00000198105.7418.82090712.60520-0.766808.577206.89320HepG2TUFM
ZNF248ENSG00000198105.7540.32340754.28190-0.481302.893102.03890HepG2UBE2L3
ZNF248ENSG00000198105.7343.22960264.417700.376302.015001.36680HepG2UCHL5
ZNF248ENSG00000198105.7401.00230650.06510-0.697008.791207.82120HepG2UTP3
ZNF248ENSG00000198105.7550.39810420.652500.387703.205902.49180HepG2ZC3H8
ZNF248ENSG00000198105.7560.92720740.52520-0.400704.443503.79320HepG2ZNF622
ZNF248ENSG00000198105.7499.12660606.04080-0.280001.827901.34720K562AGGF1
ZNF248ENSG00000198105.7221.05120322.98140-0.547103.170302.32090K562EIF3G
ZNF248ENSG00000198105.7456.15240274.138200.734505.231803.59510K562FKBP4
ZNF248ENSG00000198105.7255.61910410.33640-0.682805.844305.01320K562FXR1
ZNF248ENSG00000198105.7473.62690339.944300.478403.304302.13120K562HNRNPA1
ZNF248ENSG00000198105.7300.32310506.22300-0.753303.177402.18350K562MATR3
ZNF248ENSG00000198105.7285.52080379.28360-0.409702.192801.41240K562METAP2
ZNF248ENSG00000198105.7533.60730392.572000.442703.663702.74320K562MTPAP
ZNF248ENSG00000198105.7305.19010415.63540-0.445602.470001.69860K562PPIG
ZNF248ENSG00000198105.7299.48490492.75140-0.718404.316103.50360K562PTBP1
ZNF248ENSG00000198105.7539.12460776.39920-0.526204.739803.67510K562PUF60
ZNF248ENSG00000198105.7414.70910609.35350-0.555205.068904.28840K562RBM15
ZNF248ENSG00000198105.7308.03980472.67540-0.617702.628601.81060K562RBM22
ZNF248ENSG00000198105.7336.31950497.37190-0.564502.769401.67640K562NELFE
ZNF248ENSG00000198105.7317.18660503.89650-0.667806.325204.99870K562SF3B4
ZNF248ENSG00000198105.7227.89810483.02240-1.083707.514706.35760K562SRSF1
ZNF248ENSG00000198105.7313.01030488.93250-0.643403.440902.64830K562TARDBP
ZNF248ENSG00000198105.7326.64220471.60900-0.529902.771701.95310K562TIA1
ZNF248ENSG00000198105.7358.36170485.10130-0.436902.964302.13320K562U2AF2
ZNF248ENSG00000198105.7604.02840462.501100.385103.270102.49270K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF248 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZNF248 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZNF248 is not avaliable on ENCORE database.