ZKSCAN8

General Information

Gene Name       : ZKSCAN8
Gene ID             : ENSG00000198315.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZKSCAN8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZKSCAN8ENSG00000198315.1014.6512.1913.42ENCSR000AEF
HepG2ZKSCAN8ENSG00000198315.1011.7120.7616.23ENCSR985KAT
K562ZKSCAN8ENSG00000198315.1025.6325.3325.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZKSCAN8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZKSCAN8 RNA is bound by 22 proteins.  







eCLIP assay for ZKSCAN8 is not avaliable on ENCORE database.





22 proteins are bound to ZKSCAN8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62812213728122243+3'-UTR3.971469.00665HepG2PCBP2
chr62812083828121004+3'-UTR,CDS3.718828.08512K562SRSF1
chr62812354028123651+3'-UTR4.8355514.71659HepG2HNRNPL
chr62811968728119734+3'-UTR,CDS,intron-Proximal3.313733.32039HepG2PPIG
chr62812401828124078+3'-UTR4.053743.74511K562IGF2BP1
chr62812356728123610+3'-UTR3.753895.33418K562FAM120A
chr62812003928120062+3'-UTR,CDS5.255566.64300K562ZNF622
chr62812004428120163+3'-UTR,CDS,intron-Proximal3.226377.98451K562DDX24
chr62812369928123779+3'-UTR3.584379.82186K562UPF1
chr62812006228120135+3'-UTR,CDS4.6189813.43327K562ZNF622
chr62812003828120125+3'-UTR,CDS,intron-Proximal3.571904.44254K562GRWD1
chr62812003428120154+3'-UTR,CDS,intron-Proximal3.966169.30518HepG2PPIG
chr62811615128116244+3'-UTR,5'-UTR,CDS4.511108.41475HepG2BCLAF1
chr62811965828119768+3'-UTR,CDS,intron-Proximal4.7923217.48691HepG2PRPF8
chr62812003028120083+3'-UTR,CDS,intron-Proximal4.566614.79708HepG2U2AF2
chr62812364328123760+3'-UTR4.446519.94935K562MATR3
chr62812354228123618+3'-UTR3.7652215.82186K562QKI
chr62812370428123737+3'-UTR6.0328418.39657K562TIA1
chr62812353728123610+3'-UTR3.126466.84091K562MATR3
chr62812370128123766+3'-UTR3.775033.44480HepG2TIA1
chr62812293528123088+3'-UTR3.439337.94374K562IGF2BP1
chr62812368428123766+3'-UTR3.324385.19856HepG2PTBP1
chr62812013528120162+3'-UTR,CDS3.204154.74755K562ZNF622
chr62811613028116240+3'-UTR,5'-UTR,CDS3.5643910.87664K562ZNF622
chr62812373728123785+3'-UTR4.3672410.65642K562TIA1
chr62812369228123748+3'-UTR3.610639.96429K562PTBP1
chr62812355528123628+3'-UTR3.8850915.69426HepG2QKI
chr62812390028123975+3'-UTR3.000015.50836K562HNRNPL
chr62812005328120132+3'-UTR,CDS3.992563.62765K562SRSF1
chr62812370828123761+3'-UTR3.369156.89315K562FAM120A
chr62810977928109867+5'-UTR,intron-Proximal3.8211421.90299HepG2PRPF8
chr62811632528116421+CDS3.325486.24463HepG2GRWD1
chr62811624528116325+CDS4.018576.91167HepG2GRWD1
chr62811658028116605+CDS,intron-Proximal3.485846.18248K562UCHL5
chr62811624028116307+CDS3.522407.70405K562ZNF622
chr62811720928117297+CDS,intron-Proximal3.333024.77135K562SMNDC1
chr62811725928117294+CDS,intron-Proximal4.368209.20390K562UCHL5
chr62811650128116538+CDS3.887075.80935K562ZNF622
chr62811632428116374+CDS4.663635.17013K562RBM15
chr62810983728109911+intron-Distal,intron-Proximal5.016148.08215HepG2EFTUD2
chr62812022628120285+intron-Distal,intron-Proximal3.598684.06013K562PRPF8
chr62811977328119828+intron-Distal,intron-Proximal3.308433.20886K562PRPF8
chr62811223428112298+intron-Distal,intron-Proximal3.731055.94541K562TIA1
chr62811971428119757+intron-Proximal5.9653212.64691K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZKSCAN8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZKSCAN8 is not available on ENCORE database.

  • 94 RBPs can affect the levels of ZKSCAN8.  








The Knockdown/knockout RNA-Seq assay for ZKSCAN8 is not available on ENCORE database.





94 RBPs can affect the gene expression of ZKSCAN8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZKSCAN8ENSG00000198315.61998.694501548.634400.368003.358402.18310HepG2AATF
ZKSCAN8ENSG00000198315.61704.296002215.25500-0.378304.938804.17150HepG2ACO1
ZKSCAN8ENSG00000198315.61108.369901561.46730-0.494503.474202.42460HepG2BCCIP
ZKSCAN8ENSG00000198315.62936.740402286.534000.361003.351202.60300HepG2CPSF6
ZKSCAN8ENSG00000198315.61396.346101709.12960-0.291602.300301.67440HepG2DDX21
ZKSCAN8ENSG00000198315.62145.098301672.086900.359303.776802.69880HepG2DDX24
ZKSCAN8ENSG00000198315.61362.171001802.21400-0.403902.738202.12410HepG2DDX6
ZKSCAN8ENSG00000198315.62452.467502034.873000.269202.182901.31050HepG2DHX30
ZKSCAN8ENSG00000198315.62483.198702119.481900.228402.080601.48080HepG2DKC1
ZKSCAN8ENSG00000198315.61821.180002109.73790-0.212202.033901.42140HepG2DNAJC21
ZKSCAN8ENSG00000198315.61845.132702091.24640-0.180602.178101.58660HepG2DNAJC2
ZKSCAN8ENSG00000198315.62691.630501914.841700.491204.169203.38890HepG2EIF4A3
ZKSCAN8ENSG00000198315.63345.215702664.638600.328103.212002.03620HepG2ESF1
ZKSCAN8ENSG00000198315.62282.874201367.705800.7390012.4838010.87130HepG2FUBP3
ZKSCAN8ENSG00000198315.62714.636701902.441500.512805.365104.11320HepG2G3BP2
ZKSCAN8ENSG00000198315.62830.794602336.243800.276903.803102.97480HepG2HNRNPF
ZKSCAN8ENSG00000198315.62267.449401814.454000.321402.596501.91820HepG2HNRNPK
ZKSCAN8ENSG00000198315.61781.149402094.68130-0.233903.565002.80700HepG2HNRNPL
ZKSCAN8ENSG00000198315.61585.082602353.55560-0.5703014.0840012.80520HepG2HNRNPU
ZKSCAN8ENSG00000198315.62458.490701832.248200.424102.788701.78320HepG2KHSRP
ZKSCAN8ENSG00000198315.62715.387401932.473100.490604.679303.83260HepG2MAGOH
ZKSCAN8ENSG00000198315.62430.642701989.122600.289101.850201.32600HepG2NCBP2
ZKSCAN8ENSG00000198315.63072.810102193.286000.486405.561304.51960HepG2NSUN2
ZKSCAN8ENSG00000198315.61980.502501672.613900.243702.949002.32530HepG2PCBP1
ZKSCAN8ENSG00000198315.62714.929602280.287300.251603.221902.39300HepG2PRPF4
ZKSCAN8ENSG00000198315.61956.202501702.017400.200701.918201.44670HepG2PTBP1
ZKSCAN8ENSG00000198315.62754.304502308.806400.254402.407801.78160HepG2PUM2
ZKSCAN8ENSG00000198315.62409.410501843.177300.386405.316004.49120HepG2QKI
ZKSCAN8ENSG00000198315.64167.955903499.619700.252002.833401.96680HepG2RBM15
ZKSCAN8ENSG00000198315.63699.115902737.098600.434407.904407.13340HepG2RBM22
ZKSCAN8ENSG00000198315.62500.511701672.858400.579809.089707.92370HepG2RBM25
ZKSCAN8ENSG00000198315.62410.074301894.123600.347405.537004.81400HepG2NELFE
ZKSCAN8ENSG00000198315.62510.793301764.224500.5090011.3815010.26050HepG2RECQL
ZKSCAN8ENSG00000198315.61832.962502095.91840-0.193402.245901.65500HepG2SAFB2
ZKSCAN8ENSG00000198315.62931.155902448.423500.259502.004101.39850HepG2SF3B1
ZKSCAN8ENSG00000198315.62400.969301771.894000.438208.476607.53060HepG2SF3B4
ZKSCAN8ENSG00000198315.62367.236502086.887400.181802.152601.52010HepG2SLBP
ZKSCAN8ENSG00000198315.61597.123702444.14940-0.6139020.4320018.92880HepG2SMN1
ZKSCAN8ENSG00000198315.63770.962702724.287700.469002.887602.08820HepG2SNRNP70
ZKSCAN8ENSG00000198315.64507.843903091.444500.5441018.0286017.04630HepG2SRFBP1
ZKSCAN8ENSG00000198315.62634.262501849.525000.5101012.2183011.37590HepG2SRSF1
ZKSCAN8ENSG00000198315.63537.165202634.411000.425003.054401.99460HepG2SRSF3
ZKSCAN8ENSG00000198315.62461.765602148.979400.195902.058701.50880HepG2SRSF5
ZKSCAN8ENSG00000198315.62690.857302295.295600.229302.744402.05080HepG2SRSF7
ZKSCAN8ENSG00000198315.62095.774801504.731400.4779010.378109.42750HepG2SRSF9
ZKSCAN8ENSG00000198315.62997.962502684.092500.159401.758801.32680HepG2SSB
ZKSCAN8ENSG00000198315.61831.698402396.72090-0.387902.398201.38400HepG2STIP1
ZKSCAN8ENSG00000198315.62718.822201662.567700.7095017.5971016.35750HepG2TAF15
ZKSCAN8ENSG00000198315.62213.466601527.522000.535008.199606.77000HepG2TIA1
ZKSCAN8ENSG00000198315.61446.727502307.37360-0.6735018.5644017.27250HepG2TRIM56
ZKSCAN8ENSG00000198315.62535.457002126.331100.253802.158001.39300HepG2TUFM
ZKSCAN8ENSG00000198315.64067.433502657.079500.614209.067107.92170HepG2U2AF1
ZKSCAN8ENSG00000198315.6704.71620902.85510-0.357502.119901.45630HepG2UCHL5
ZKSCAN8ENSG00000198315.62420.287003105.96440-0.359907.330306.28440HepG2UPF1
ZKSCAN8ENSG00000198315.6943.313401399.57580-0.569203.234902.14570HepG2UPF2
ZKSCAN8ENSG00000198315.61529.387102467.97860-0.690405.929204.32790HepG2XPO5
ZKSCAN8ENSG00000198315.62923.532002052.681800.510103.309101.91490HepG2XRCC5
ZKSCAN8ENSG00000198315.61049.676801504.47030-0.519304.385903.47870HepG2XRN2
ZKSCAN8ENSG00000198315.62855.383002250.353400.343407.103306.10800HepG2ZC3H8
ZKSCAN8ENSG00000198315.62763.313303415.96550-0.305906.869906.10850HepG2ZNF622
ZKSCAN8ENSG00000198315.65326.112806122.11510-0.200902.781702.21230K562AGGF1
ZKSCAN8ENSG00000198315.64667.909306156.24300-0.399305.256903.46870K562APOBEC3C
ZKSCAN8ENSG00000198315.69346.746804582.567401.0282026.4410024.82570K562AQR
ZKSCAN8ENSG00000198315.66332.895704792.686300.401904.154103.07940K562BOP1
ZKSCAN8ENSG00000198315.65836.569507316.17260-0.326004.093402.61900K562CCDC124
ZKSCAN8ENSG00000198315.66498.847405095.754600.350804.608003.59770K562CPSF6
ZKSCAN8ENSG00000198315.65978.898606854.79510-0.197202.208301.43640K562DKC1
ZKSCAN8ENSG00000198315.62976.925903422.78030-0.201302.211001.55740K562EIF2S2
ZKSCAN8ENSG00000198315.62392.343902834.59330-0.244702.407001.66320K562EIF3G
ZKSCAN8ENSG00000198315.63593.776204922.32660-0.453805.643004.40720K562FIP1L1
ZKSCAN8ENSG00000198315.64010.844502853.669500.491005.065503.46560K562FKBP4
ZKSCAN8ENSG00000198315.66581.837305185.285700.344003.429702.47430K562FMR1
ZKSCAN8ENSG00000198315.63209.172002506.075700.356704.740202.94410K562FUS
ZKSCAN8ENSG00000198315.62300.834203078.06160-0.419907.534006.60150K562FXR1
ZKSCAN8ENSG00000198315.65814.041703396.543900.775406.977005.74080K562G3BP2
ZKSCAN8ENSG00000198315.65287.179804010.234600.398707.042305.27710K562GLRX3
ZKSCAN8ENSG00000198315.63507.415304561.09760-0.379004.771103.77890K562GRSF1
ZKSCAN8ENSG00000198315.64010.728003287.923100.286602.984202.36750K562HNRNPC
ZKSCAN8ENSG00000198315.64575.353605982.53240-0.386904.937703.48120K562HNRNPL
ZKSCAN8ENSG00000198315.62604.959104048.53600-0.636107.540005.88090K562HNRNPM
ZKSCAN8ENSG00000198315.64716.669606673.83730-0.500706.793105.55590K562HSPD1
ZKSCAN8ENSG00000198315.65265.441304154.614800.341702.177301.36020K562KRR1
ZKSCAN8ENSG00000198315.65053.606804216.233700.261303.841502.90240K562MTPAP
ZKSCAN8ENSG00000198315.65808.736304684.642500.3102010.099408.79480K562NSUN2
ZKSCAN8ENSG00000198315.66621.173303774.505900.810702.530801.59550K562PABPN1
ZKSCAN8ENSG00000198315.63608.502105587.60100-0.630809.672807.88120K562PPIG
ZKSCAN8ENSG00000198315.62358.270703433.21780-0.541806.707005.70960K562PTBP1
ZKSCAN8ENSG00000198315.64700.337503240.821300.536303.239101.68400K562RAVER1
ZKSCAN8ENSG00000198315.64505.213603222.157500.483507.291005.04300K562RBM25
ZKSCAN8ENSG00000198315.64582.567206206.10300-0.437504.603503.27110K562RPS3
ZKSCAN8ENSG00000198315.66318.730203450.499800.872702.956701.69800K562SF1
ZKSCAN8ENSG00000198315.66515.437304622.504700.4951012.2547010.63950K562SF3A3
ZKSCAN8ENSG00000198315.66486.807904627.499600.487204.815503.50650K562SF3B1
ZKSCAN8ENSG00000198315.64677.824903532.300200.405106.069804.76800K562SF3B4
ZKSCAN8ENSG00000198315.65696.769604735.852100.266405.943504.63780K562SRPK2
ZKSCAN8ENSG00000198315.62769.192303365.54500-0.281402.092601.46760K562SRSF1
ZKSCAN8ENSG00000198315.64780.464805991.80080-0.325803.858502.58660K562SRSF4
ZKSCAN8ENSG00000198315.65225.647203984.006800.391307.319305.40210K562SRSF7
ZKSCAN8ENSG00000198315.63609.986102923.965400.304004.635402.91940K562SSB
ZKSCAN8ENSG00000198315.68530.565704741.090400.847302.894201.42500K562SUPT6H
ZKSCAN8ENSG00000198315.63133.516203724.11380-0.249102.474901.70040K562SYNCRIP
ZKSCAN8ENSG00000198315.64555.956803540.854300.363603.825601.92620K562TBRG4
ZKSCAN8ENSG00000198315.65428.025603292.908100.721007.857205.85720K562U2AF1
ZKSCAN8ENSG00000198315.65008.391703400.676300.5584010.952209.34440K562U2AF2
ZKSCAN8ENSG00000198315.65537.441904967.223600.156701.946501.33660K562UPF1
ZKSCAN8ENSG00000198315.66362.791104250.300000.5820010.737408.96370K562WDR3
ZKSCAN8ENSG00000198315.65415.220504419.793800.292906.310705.08350K562WDR43
ZKSCAN8ENSG00000198315.68832.663104664.414600.921103.371401.56700K562YTHDC2
ZKSCAN8ENSG00000198315.66842.574805161.614300.406605.106803.87590K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZKSCAN8 is not available on ENCORE database.





15 RBPs can affect the splicing of ZKSCAN8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZKSCAN8ENSG00000198315.6chr6+2811210828112202281097152810980728116093281166020.118000.000510.01200includedK562SRSF1
SEZKSCAN8ENSG00000198315.6chr6+281200382812016228119622281197142812083328120857-0.106000.001280.02561excludedK562SF3B4
SEZKSCAN8ENSG00000198315.6chr6+2811210828112202281097152810980728116093281166020.308000.001220.02436includedHepG2U2AF1
SEZKSCAN8ENSG00000198315.6chr6+2811210828112202281097152810980728116093281166020.175000.000490.01506includedHepG2HNRNPK
SEZKSCAN8ENSG00000198315.6chr6+281200382812017228119639281197142812083328121889-0.138000.009840.09013excludedHepG2U2AF2
SEZKSCAN8ENSG00000198315.6chr6+281200382812017228119582281197142812083328121889-0.111000.004750.04456excludedK562AQR
SEZKSCAN8ENSG00000198315.6chr6+281121082811220228109715281098072811609328116602-0.097000.000040.00083excludedK562AQR
SEZKSCAN8ENSG00000198315.6chr6+2811210828112202281097152810980728116093281166020.164000.000010.01205includedK562KHSRP
SEZKSCAN8ENSG00000198315.6chr6+2812003828120172281196392811971428120833281218510.114000.000020.01049includedK562SBDS
SEZKSCAN8ENSG00000198315.6chr6+281160932811660228109715281098072811726028117402-0.355000.000000.00006excludedHepG2SRSF1
SEZKSCAN8ENSG00000198315.6chr6+281200382812016228119622281197142812083328121851-0.095000.001110.03315excludedHepG2SF3A3
SEZKSCAN8ENSG00000198315.6chr6+2811210828112202281097152810980728116093281166020.128000.001500.08644includedHepG2IGF2BP3
SEZKSCAN8ENSG00000198315.6chr6+281200382812017228119639281197142812083328121851-0.073000.001210.07383excludedK562HNRNPUL1
SEZKSCAN8ENSG00000198315.6chr6+2811210828112202281097152810980728116093281166160.118000.000860.09281includedK562RBM22
SEZKSCAN8ENSG00000198315.6chr6+281121082811220228109715281098072811609328116602-0.106000.000070.00347excludedK562AGGF1
SEZKSCAN8ENSG00000198315.6chr6+281200382812017228119622281197142812083328127250-0.136000.000390.01977excludedK562SF3B1
SEZKSCAN8ENSG00000198315.6chr6+2811210828112202281097152810980728116093281166160.238000.000010.00102includedK562HNRNPK
SEZKSCAN8ENSG00000198315.6chr6+2811210828112202281097152810980728116093281166020.217000.000060.01641includedHepG2KHSRP
A3SSZKSCAN8ENSG00000198315.6chr6+2812000228120162281200382812016228119622281197140.101000.000000.00000longerK562AQR
A5SSZKSCAN8ENSG00000198315.6chr6+2811963928119874281196392811971428120038281201720.098000.000000.00000longerK562AQR
MXEZKSCAN8ENSG00000198315.6chr6+28112108281122022811609328116602281097152810980728117260281174020.146000.000010.000351includedK562SRSF1
MXEZKSCAN8ENSG00000198315.6chr6+28112108281122022811609328116263281097152810980728117260281174020.190000.000120.003311includedK562SRSF1
MXEZKSCAN8ENSG00000198315.6chr6+28119582281197142811997628120162281172602811740228120833281218510.057000.016770.095681includedK562AQR
MXEZKSCAN8ENSG00000198315.6chr6+28119622281197142812003828120162281172602811740228120833281208570.095000.000100.062541includedK562ABCF1
MXEZKSCAN8ENSG00000198315.6chr6+28112108281122022811609328116263281097152810980728117260281174020.109000.006840.082811includedK562SF3B4
MXEZKSCAN8ENSG00000198315.6chr6+28112108281122022811609328116602281097152810980728117260281174020.163000.000040.006441includedK562HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZKSCAN8 is not avaliable on ENCORE database.