ZBTB40

General Information

Gene Name       : ZBTB40
Gene ID             : ENSG00000184677.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZBTB40)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZBTB40ENSG00000184677.176.878.387.62ENCSR000AEF
HepG2ZBTB40ENSG00000184677.179.018.958.98ENCSR985KAT
K562ZBTB40ENSG00000184677.1714.5415.4014.97ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZBTB40 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZBTB40 RNA is bound by 19 proteins.  







eCLIP assay for ZBTB40 is not avaliable on ENCORE database.





19 proteins are bound to ZBTB40 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12285295722852994+3'-UTR4.201534.56106HepG2EIF3H
chr12285521022855298+3'-UTR3.1054211.24747K562UPF1
chr12285665422856709+3'-UTR4.871416.42091K562UPF1
chr12285292122852996+3'-UTR4.950306.54449K562RBM15
chr12285426622854319+3'-UTR5.067926.29854K562UPF1
chr12285705122857095+3'-UTR5.623477.23011HepG2EIF3H
chr12285646322856522+3'-UTR3.627584.86573HepG2EIF3H
chr12285539022855438+3'-UTR3.456043.54210HepG2EIF3H
chr12285465622854693+3'-UTR5.415955.26450HepG2EIF3H
chr12285412822854201+3'-UTR5.6854311.97438K562UPF1
chr12285684222856948+3'-UTR4.143774.49585HepG2LSM11
chr12285685522856865+3'-UTR4.349214.07810K562UPF1
chr12285615622856193+3'-UTR4.545374.22051K562UPF1
chr12285320022853261+3'-UTR3.871415.61622K562UPF1
chr12285641022856449+3'-UTR3.753084.43601HepG2EIF3H
chr12283938322839483+CDS,intron-Proximal4.6685210.09745HepG2PRPF8
chr12282876722828823+CDS,intron-Distal,intron-Proximal3.268974.38519K562BUD13
chr12282808122828169+CDS,intron-Distal4.349927.97334HepG2BCLAF1
chr12282875222828826+CDS,intron-Distal,intron-Proximal3.004993.40723K562SMNDC1
chr12284660922846737+CDS3.412126.89519HepG2PPIG
chr12283258322832721+CDS3.097295.39266HepG2GRWD1
chr12283850722838591+CDS4.7528912.16203HepG2PPIG
chr12283566922835726+CDS3.007523.41665HepG2GRWD1
chr12283936922839438+CDS,intron-Proximal4.9011115.45935K562AQR
chr12283564822835726+CDS3.586666.09767K562UCHL5
chr12283830922838395+CDS3.527724.45064HepG2GRWD1
chr12283767122837819+CDS,intron-Proximal3.278925.54854HepG2GRWD1
chr12283820822838368+CDS3.242568.61966K562ZNF622
chr12284394522844009+CDS,intron-Proximal3.392405.66421K562PRPF8
chr12282877422828838+CDS,intron-Distal,intron-Proximal5.1334833.54357HepG2U2AF2
chr12283847422838616+CDS3.7116915.90087K562UCHL5
chr12283859122838636+CDS,intron-Proximal3.414754.24993HepG2PPIG
chr12284650822846562+CDS,intron-Proximal3.116374.05586HepG2U2AF2
chr12283851022838596+CDS3.8224310.86716K562ZNF622
chr12284659122846693+CDS3.405335.10069HepG2GRWD1
chr12283951822839613+CDS3.874305.08388K562UCHL5
chr12282877722828828+CDS,intron-Distal,intron-Proximal4.910488.43339K562U2AF2
chr12283853022838565+CDS4.319363.38968HepG2BCLAF1
chr12282799122828081+CDS,intron-Distal4.619518.41475HepG2BCLAF1
chr12284391822844010+CDS,intron-Proximal4.339933.70678K562BUD13
chr12283502322835089+CDS3.059403.25772K562ZNF622
chr12281796222818019+CDS3.636093.68471HepG2BCLAF1
chr12283561622835725+CDS3.977423.22245K562GRWD1
chr12285280022852838+CDS4.123473.65594HepG2EIF3H
chr12284648722846557+CDS,intron-Proximal5.049854.65563K562AQR
chr12284815022848164+CDS,intron-Proximal3.964544.49024K562AQR
chr12283767822837746+CDS3.790705.03335K562UCHL5
chr12284814022848204+CDS,intron-Proximal4.574515.60100HepG2PRPF8
chr12283767122837809+CDS,intron-Proximal4.3651212.74895K562ZNF622
chr12283262422832718+CDS3.670813.73423K562UCHL5
chr12283823222838353+CDS3.453618.75642K562UCHL5
chr12283836822838419+CDS3.393415.35144K562ZNF622
chr12284382622843910+CDS3.928553.12746HepG2GRWD1
chr12282798922828045+CDS,intron-Distal3.423924.51003HepG2PPIG
chr12284670422846760+CDS4.373514.10591HepG2EIF3H
chr12283937922839441+CDS,intron-Proximal4.5272910.38579HepG2AQR
chr12284650422846558+CDS,intron-Proximal4.114143.49003K562PRPF8
chr12283268122832725+CDS3.567343.68471HepG2BCLAF1
chr12282884822828934+CDS,intron-Distal4.130115.79432HepG2BCLAF1
chr12284670722846754+CDS3.463083.36945K562ZNF622
chr12283949322839613+CDS4.698837.25648HepG2GRWD1
chr12282877822828827+CDS,intron-Distal,intron-Proximal4.6595813.71132HepG2U2AF1
chr12283774522837798+CDS3.668163.68471HepG2BCLAF1
chr12283863622838763+intron-Distal,intron-Proximal4.5143115.64024K562AQR
chr12282917022829275+intron-Distal3.962933.58513HepG2GTF2F1
chr12282915422829292+intron-Distal4.278414.13641K562TARDBP
chr12283876322838813+intron-Distal3.701635.34337K562AQR
chr12282920822829260+intron-Distal4.570998.08513K562EIF4G2
chr12282835122828418+intron-Distal3.654436.75956HepG2U2AF2
chr12282914922829242+intron-Distal4.214704.35952HepG2PRPF4
chr12282915422829208+intron-Distal4.301968.52906K562EIF4G2
chr12284816422848221+intron-Proximal5.459848.34710K562AQR
chr12284397622844010+intron-Proximal4.8605915.18812K562AQR
chr12284397022844010+intron-Proximal3.255083.94654HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZBTB40 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZBTB40 is not available on ENCORE database.

  • 105 RBPs can affect the levels of ZBTB40.  








The Knockdown/knockout RNA-Seq assay for ZBTB40 is not available on ENCORE database.





105 RBPs can affect the gene expression of ZBTB40 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZBTB40ENSG00000184677.121000.631401310.78860-0.389505.677604.86860HepG2ACO1
ZBTB40ENSG00000184677.121365.12060884.348500.626206.863005.37860HepG2ADAR
ZBTB40ENSG00000184677.12851.040201151.04050-0.435602.719502.19180HepG2AKAP1
ZBTB40ENSG00000184677.121182.174601871.56410-0.6628015.2898013.90590HepG2AUH
ZBTB40ENSG00000184677.121672.32130878.818400.9281015.8172014.55420HepG2BOP1
ZBTB40ENSG00000184677.121780.09920904.822500.9762015.2574013.61100HepG2CIRBP
ZBTB40ENSG00000184677.121062.535601310.53500-0.302603.915003.15030HepG2CKAP4
ZBTB40ENSG00000184677.12984.292901362.18050-0.468806.821105.89790HepG2CELF1
ZBTB40ENSG00000184677.121679.858301464.755300.197602.070201.41570HepG2DAZAP1
ZBTB40ENSG00000184677.121135.18220908.153100.321802.667901.53090HepG2DDX1
ZBTB40ENSG00000184677.121589.352601050.354100.597508.392706.81570HepG2DDX24
ZBTB40ENSG00000184677.12916.687601151.14090-0.328602.251301.33810HepG2DDX5
ZBTB40ENSG00000184677.121775.157301254.077500.501209.050407.96530HepG2DKC1
ZBTB40ENSG00000184677.121033.06690882.633700.226902.240901.64140HepG2DNAJC2
ZBTB40ENSG00000184677.121278.24480910.492200.489303.972303.27030HepG2EIF2S1
ZBTB40ENSG00000184677.121031.31820805.149600.357102.536501.66660HepG2EIF3D
ZBTB40ENSG00000184677.121351.264701013.520100.414804.294302.98510HepG2EIF3G
ZBTB40ENSG00000184677.121986.722601006.150500.9814013.2589011.88100HepG2EIF4A3
ZBTB40ENSG00000184677.121438.80280979.724900.554303.645802.86200HepG2EIF4B
ZBTB40ENSG00000184677.121686.151301445.004800.222602.176601.41930HepG2EIF4G1
ZBTB40ENSG00000184677.121870.675901280.902400.546307.291505.93860HepG2EWSR1
ZBTB40ENSG00000184677.12877.22970667.857800.393303.103102.27380HepG2FUBP3
ZBTB40ENSG00000184677.121408.171401015.316100.471803.866503.05780HepG2FXR1
ZBTB40ENSG00000184677.121348.68660941.774400.518004.212403.40010HepG2G3BP1
ZBTB40ENSG00000184677.121841.94580999.919100.8812012.7442010.83430HepG2G3BP2
ZBTB40ENSG00000184677.121001.83750716.892200.482703.953002.86860HepG2GEMIN5
ZBTB40ENSG00000184677.121889.358501261.490500.582703.991702.65420HepG2GRSF1
ZBTB40ENSG00000184677.121551.028101236.160300.327303.812102.98250HepG2HNRNPF
ZBTB40ENSG00000184677.122592.55850953.819101.4425037.3446035.08500HepG2HNRNPK
ZBTB40ENSG00000184677.123478.435701334.303201.38230101.3096098.33430HepG2HNRNPL
ZBTB40ENSG00000184677.121169.53700872.708200.422303.117302.45400HepG2HNRNPLL
ZBTB40ENSG00000184677.12580.91690993.39000-0.7740014.8787013.56420HepG2HNRNPU
ZBTB40ENSG00000184677.121497.094001217.256900.298402.396401.72040HepG2IGF2BP1
ZBTB40ENSG00000184677.121673.91190957.264600.8061010.420509.19760HepG2IGF2BP2
ZBTB40ENSG00000184677.12810.539501042.36880-0.362902.500701.42590HepG2LARP7
ZBTB40ENSG00000184677.122042.745901015.671301.0080015.7104014.20980HepG2MAGOH
ZBTB40ENSG00000184677.12921.983901119.42680-0.279902.144001.42730HepG2MSI2
ZBTB40ENSG00000184677.121234.790501452.44420-0.234201.995601.34530HepG2NOL12
ZBTB40ENSG00000184677.12988.81740773.872800.353502.236701.56180HepG2NSUN2
ZBTB40ENSG00000184677.121904.13420917.270401.0536036.4077034.63950HepG2PCBP1
ZBTB40ENSG00000184677.121060.99480886.024400.259902.156501.49770HepG2PPIL4
ZBTB40ENSG00000184677.121125.00630933.377700.269302.578402.04730HepG2PTBP1
ZBTB40ENSG00000184677.122088.802701796.012400.217802.079201.61300HepG2RBM22
ZBTB40ENSG00000184677.121182.17740917.407000.365703.181602.46340HepG2RBM25
ZBTB40ENSG00000184677.121344.923701020.652000.397902.639501.60650HepG2RCC2
ZBTB40ENSG00000184677.121478.341401038.742500.509008.065607.22840HepG2NELFE
ZBTB40ENSG00000184677.121520.51490967.478700.6522013.3773012.17630HepG2RECQL
ZBTB40ENSG00000184677.121868.853301331.769300.488704.933504.05590HepG2RPLP0
ZBTB40ENSG00000184677.121892.169001103.951900.777306.269504.88480HepG2RPS10
ZBTB40ENSG00000184677.121420.486101159.246600.293102.192701.47580HepG2RPS2
ZBTB40ENSG00000184677.121299.96300971.729400.419705.624404.83190HepG2SF3B4
ZBTB40ENSG00000184677.12546.28750961.10860-0.815005.758604.62200HepG2SNRNP70
ZBTB40ENSG00000184677.122984.179502028.525100.5568015.7442014.80640HepG2SRFBP1
ZBTB40ENSG00000184677.121344.329701014.290300.406305.597504.98420HepG2SRSF1
ZBTB40ENSG00000184677.121212.55910825.192300.555209.901508.96960HepG2SRSF9
ZBTB40ENSG00000184677.122302.572201761.231700.386607.094706.34670HepG2SSB
ZBTB40ENSG00000184677.121185.77980933.959300.344302.670301.74410HepG2SUPT6H
ZBTB40ENSG00000184677.121261.63020911.725900.468506.156305.37600HepG2TAF15
ZBTB40ENSG00000184677.121467.19860965.261900.604009.186908.36860HepG2TIAL1
ZBTB40ENSG00000184677.121786.297801354.475500.399104.185603.08360HepG2TUFM
ZBTB40ENSG00000184677.12872.40930595.298400.551304.617803.63270HepG2UCHL5
ZBTB40ENSG00000184677.122078.621301631.345700.349505.583704.78150HepG2UTP3
ZBTB40ENSG00000184677.121265.72840991.982600.351502.381101.70360HepG2XRN2
ZBTB40ENSG00000184677.12999.424801157.88530-0.212302.041501.45080HepG2ZC3H8
ZBTB40ENSG00000184677.122348.760601858.352200.337806.833006.07340HepG2ZNF622
ZBTB40ENSG00000184677.121646.167902554.37680-0.6339016.5730015.30800K562AGGF1
ZBTB40ENSG00000184677.122222.819502806.81530-0.336503.146902.08340K562AKAP8
ZBTB40ENSG00000184677.121991.139502657.93040-0.416704.498503.65840K562AKAP8L
ZBTB40ENSG00000184677.125466.440503168.208800.7868015.0039013.78850K562AQR
ZBTB40ENSG00000184677.122355.973302788.78150-0.243302.603601.71970K562ATP5C1
ZBTB40ENSG00000184677.121962.016501561.463400.329302.524401.69290K562BOP1
ZBTB40ENSG00000184677.122388.100203052.66730-0.354204.388702.86360K562CCDC124
ZBTB40ENSG00000184677.123691.833602391.601400.626304.078202.74690K562CNOT7
ZBTB40ENSG00000184677.122041.792201660.251000.298302.825302.03520K562CPSF6
ZBTB40ENSG00000184677.121285.887701586.95770-0.303502.605701.59650K562DDX3X
ZBTB40ENSG00000184677.123689.848103114.586400.244401.989001.41980K562DDX47
ZBTB40ENSG00000184677.121257.064301608.98010-0.356104.172502.46800K562DDX6
ZBTB40ENSG00000184677.122382.446002860.21400-0.263703.192902.24350K562DKC1
ZBTB40ENSG00000184677.123041.345801991.490900.610805.416003.59230K562EEF2
ZBTB40ENSG00000184677.122424.872302898.45820-0.257403.139102.37930K562EIF2S2
ZBTB40ENSG00000184677.121948.003701548.079100.331404.042003.09050K562EIF3G
ZBTB40ENSG00000184677.122372.556901658.002900.516906.492805.24330K562EIF4A3
ZBTB40ENSG00000184677.124674.232804101.564700.188502.492401.59750K562EIF4G2
ZBTB40ENSG00000184677.121830.910802312.50130-0.336902.694801.85750K562FIP1L1
ZBTB40ENSG00000184677.122060.396801689.329200.286402.102401.35190K562FMR1
ZBTB40ENSG00000184677.122695.725301724.257400.644607.961107.00280K562FXR1
ZBTB40ENSG00000184677.12915.179801349.57550-0.560404.049403.15370K562G3BP2
ZBTB40ENSG00000184677.123201.069003862.46030-0.271002.512601.78950K562GRSF1
ZBTB40ENSG00000184677.122478.284201686.461200.555206.030704.13680K562HNRNPK
ZBTB40ENSG00000184677.126219.841402814.543001.1439036.3508032.72370K562HNRNPL
ZBTB40ENSG00000184677.121368.918101902.19360-0.474603.913802.79290K562HNRNPM
ZBTB40ENSG00000184677.122031.526102461.52740-0.277003.120402.17420K562HNRNPU
ZBTB40ENSG00000184677.122063.281403135.08080-0.603608.157206.80670K562HSPD1
ZBTB40ENSG00000184677.122249.513902820.77900-0.326503.434802.50380K562KIF1C
ZBTB40ENSG00000184677.122498.146601774.813300.493106.578205.25510K562MAGOH
ZBTB40ENSG00000184677.122050.729102700.13860-0.396903.880802.53790K562MAK16
ZBTB40ENSG00000184677.122466.327203159.97790-0.357603.914602.80220K562MBNL1
ZBTB40ENSG00000184677.121923.704001547.250400.314102.627601.77810K562METAP2
ZBTB40ENSG00000184677.122676.437602348.452200.188502.049901.34890K562MTPAP
ZBTB40ENSG00000184677.121337.642101655.58300-0.307602.835201.59010K562NCBP2
ZBTB40ENSG00000184677.121462.287101895.88590-0.374602.806001.50010K562NONO
ZBTB40ENSG00000184677.123360.239802609.382700.3648010.287408.97140K562NSUN2
ZBTB40ENSG00000184677.121940.953102272.49310-0.227501.983401.30320K562POLR2G
ZBTB40ENSG00000184677.122002.431802625.33140-0.390703.594702.64030K562PPIG
ZBTB40ENSG00000184677.126421.979704475.219300.521006.547605.29200K562PUF60
ZBTB40ENSG00000184677.123929.060804759.37010-0.276602.791201.71760K562PUM1
ZBTB40ENSG00000184677.121770.406502636.04110-0.574307.268306.43510K562PUS1
ZBTB40ENSG00000184677.122136.975002568.33920-0.265302.865702.26360K562RBM15
ZBTB40ENSG00000184677.123061.438202574.733200.249703.144402.27580K562SF3A3
ZBTB40ENSG00000184677.123525.000502637.864200.4182010.960409.24810K562SRPK2
ZBTB40ENSG00000184677.122004.278801690.560800.245502.058501.43830K562SRSF1
ZBTB40ENSG00000184677.121261.765101596.88520-0.339803.733802.21680K562SSB
ZBTB40ENSG00000184677.122455.241601812.975300.437403.710102.51730K562SUPV3L1
ZBTB40ENSG00000184677.122812.657403281.85170-0.222603.005501.68110K562TROVE2
ZBTB40ENSG00000184677.12957.666801307.53160-0.449303.297902.08310K562U2AF1
ZBTB40ENSG00000184677.121116.756901350.60680-0.274302.337801.60060K562U2AF2
ZBTB40ENSG00000184677.122464.935102766.78050-0.166701.944701.33500K562UPF1
ZBTB40ENSG00000184677.123049.215102367.452100.365004.172403.09040K562WDR3
ZBTB40ENSG00000184677.123275.649802461.838700.411907.328206.01460K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZBTB40 is not available on ENCORE database.





3 RBPs can affect the splicing of ZBTB40 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZBTB40ENSG00000184677.12chr1+2282836922828464228279842282817722828791228289340.149000.001140.04143includedK562PRPF8
SEZBTB40ENSG00000184677.12chr1+228344932283463022832541228327342283502222835224-0.069000.007170.08157excludedK562PUS1
SEZBTB40ENSG00000184677.12chr1+2277915122779439227783432277849722816372228171380.158000.006930.08935includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZBTB40 is not avaliable on ENCORE database.