TRIM44

General Information

Gene Name       : TRIM44
Gene ID             : ENSG00000166326.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRIM44)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIM44ENSG00000166326.633.4442.1137.77ENCSR000AEF
HepG2TRIM44ENSG00000166326.632.2026.3029.25ENCSR985KAT
K562TRIM44ENSG00000166326.657.0559.9158.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIM44 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRIM44 RNA is bound by 36 proteins.  







eCLIP assay for TRIM44 is not avaliable on ENCORE database.





36 proteins are bound to TRIM44 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr113582852135828561+3'-UTR4.470967.89398K562FAM120A
chr113582950935829548+3'-UTR4.257123.89948K562YBX3
chr113582840535828463+3'-UTR3.116467.38616K562FAM120A
chr113582958435829593+3'-UTR3.701909.50094K562YBX3
chr113582845135828521+3'-UTR3.947949.87397K562UPF1
chr113582879435828875+3'-UTR3.1522212.97935K562UPF1
chr113582954835829565+3'-UTR4.1039210.18354K562YBX3
chr113582880835828849+3'-UTR3.6062911.72702K562FAM120A
chr113582903235829142+3'-UTR3.5522519.19504K562UPF1
chr113582890635828992+3'-UTR4.136013.70195HepG2UPF1
chr113582966535829745+3'-UTR3.271579.11553K562UPF1
chr113582869835828794+3'-UTR3.4337020.60831K562UPF1
chr113582858535828649+3'-UTR4.0828618.53709K562FAM120A
chr113582838635828438+3'-UTR4.8175312.17194K562UPF1
chr113582956535829584+3'-UTR3.779289.89088K562YBX3
chr113582893535829103+3'-UTR3.908653.55864HepG2IGF2BP3
chr113582792935827941+3'-UTR,CDS4.124266.95786K562UCHL5
chr113582852135828577+3'-UTR4.3049015.06371K562UPF1
chr113582846035828589+3'-UTR3.666213.71253K562LIN28B
chr113582795035827990+3'-UTR3.778415.91510K562TARDBP
chr113582798135828037+3'-UTR3.981627.04834K562GRWD1
chr113582869235828780+3'-UTR3.4731719.32048K562FAM120A
chr113582857735828634+3'-UTR4.9879617.94406K562UPF1
chr113568446735684526+5'-UTR3.716633.59926K562DDX3X
chr113568458335684649+5'-UTR3.322925.58900K562MTPAP
chr113568447835684525+5'-UTR3.240403.54074K562RBM15
chr113568452735684584+5'-UTR3.020313.12542HepG2DDX3X
chr113568447035684517+5'-UTR3.620044.95734K562MTPAP
chr113568446035684538+5'-UTR4.173244.56106HepG2EIF3H
chr113568457935684625+5'-UTR3.247468.53142K562UCHL5
chr113568459335684638+5'-UTR3.749645.78807K562BUD13
chr113568449235684564+5'-UTR3.540629.77890K562ZNF622
chr113568447335684523+5'-UTR5.0622713.86840HepG2DDX3X
chr113568460935684639+5'-UTR4.877434.53658HepG2DDX3X
chr113568498935685122+CDS3.520105.74856HepG2AGGF1
chr113570681535706883+CDS3.218329.30713K562UCHL5
chr113568515935685208+CDS3.709625.08339K562TRA2A
chr113574750535747667+CDS5.311968.85633HepG2ZNF800
chr113568491735685112+CDS3.181129.07664K562SRSF7
chr113568494135685143+CDS6.3268777.03072K562UCHL5
chr113568504535685142+CDS3.601895.88155HepG2FXR2
chr113568514235685196+CDS4.410584.13543HepG2FXR2
chr113568506935685215+CDS3.3192515.69795K562CPSF6
chr113574750035747654+CDS3.039656.59690HepG2GRWD1
chr113575696235757014+CDS,intron-Proximal3.520053.62357HepG2U2AF2
chr113568500635685203+CDS3.9514530.58491K562DDX24
chr113568498635685196+CDS3.491254.24221K562TARDBP
chr113570680635706867+CDS,intron-Proximal3.131886.98093K562BUD13
chr113568501335685103+CDS4.6630424.81076K562ZNF622
chr113568513835685221+CDS4.1049823.88586K562ZNF622
chr113574767935747713+CDS,intron-Proximal3.270003.22545HepG2PPIG
chr113568512835685204+CDS3.037046.55235K562SRSF1
chr113575697335756991+CDS,intron-Proximal3.802117.05173K562ZNF622
chr113568507535685197+CDS3.376633.22540HepG2G3BP1
chr113568513135685182+CDS3.419015.10493HepG2AQR
chr113568505635685101+CDS3.156438.34643K562RBM15
chr113568514335685225+CDS5.9952263.33731K562UCHL5
chr113568506135685150+CDS5.3148431.99996K562TRA2A
chr113568503535685204+CDS3.986884.12464HepG2UCHL5
chr113574750735747573+CDS3.433175.57219K562PUM1
chr113568510035685154+CDS3.5746214.48637K562GRWD1
chr113568511235685195+CDS3.522024.64494K562SRSF7
chr113568504235685201+CDS3.3386010.52053HepG2BUD13
chr113568513435685212+CDS3.305985.28660HepG2HLTF
chr113568502135685134+CDS3.211765.92871HepG2HLTF
chr113568498135685140+CDS5.8960022.67420HepG2TRA2A
chr113575697335756991+CDS,intron-Proximal4.101424.13344K562GRWD1
chr113574747635747492+CDS3.294175.12958K562UCHL5
chr113568502835685082+CDS5.6588311.63584HepG2BCLAF1
chr113568511835685181+CDS3.731884.24070HepG2GRWD1
chr113568510135685208+CDS3.2559113.41467K562RBM15
chr113568514935685207+CDS5.012167.51173K562WDR43
chr113568496535685105+CDS4.0397013.62860HepG2SRSF1
chr113568494135685126+CDS3.5842928.48794K562SRSF1
chr113582790835827914+CDS3.314884.33023K562ZNF622
chr113570682335706882+CDS3.080344.48744HepG2BCLAF1
chr113574750735747609+CDS3.5852416.17636K562ZNF622
chr113568513735685230+CDS3.874735.05732HepG2ZNF800
chr113568510535685151+CDS3.384944.96025HepG2SRSF1
chr113568512235685203+CDS4.4543111.26137HepG2AGGF1
chr113574748935747651+CDS3.5099221.97593HepG2BCLAF1
chr113568515435685212+CDS4.6636018.82359K562GRWD1
chr113568491735685061+CDS5.2267740.87325K562TRA2A
chr113574758335747646+CDS3.487868.14251K562GRWD1
chr113568499535685199+CDS3.0460217.47706K562PUM1
chr113568508235685218+CDS6.1887130.42117HepG2BCLAF1
chr113568510335685138+CDS5.2486523.94888K562ZNF622
chr113578768835787757+intron-Distal3.196983.33633HepG2MATR3
chr113569413435694259+intron-Distal4.138543.01456K562EXOSC5
chr113579756735797634+intron-Distal4.988767.71416K562EXOSC5
chr113569574435695858+intron-Distal3.898153.34609K562TARDBP
chr113581366435813725+intron-Distal4.301644.24565HepG2HNRNPL
chr113578715335787231+intron-Distal4.224213.24322HepG2MATR3
chr113578537235785424+intron-Distal3.016543.10883HepG2SUGP2
chr113578761435787688+intron-Distal3.813313.10961HepG2MATR3
chr113578561535785691+intron-Distal4.749153.96879HepG2MATR3
chr113578560435785688+intron-Distal4.306294.75572K562MATR3
chr113575810135758160+intron-Distal4.351264.31720HepG2MATR3
chr113578764135787777+intron-Distal4.046285.88553K562MATR3
chr113574455435744710+intron-Distal4.274084.22415K562PTBP1
chr113579908035799168+intron-Distal4.334683.27946HepG2HNRNPM
chr113580521035805319+intron-Distal4.389614.39969K562TARDBP
chr113578763135787662+intron-Distal4.524603.92866K562PTBP1
chr113578761035787767+intron-Distal3.811143.89405HepG2PTBP1
chr113576259135762655+intron-Distal4.247673.62366HepG2HNRNPM
chr113579911535799169+intron-Distal3.457253.14999K562EXOSC5
chr113579911035799167+intron-Distal4.372174.27460K562HNRNPM
chr113578766235787793+intron-Distal4.2486310.46906K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRIM44 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIM44 is not available on ENCORE database.

  • 82 RBPs can affect the levels of TRIM44.  








The Knockdown/knockout RNA-Seq assay for TRIM44 is not available on ENCORE database.





82 RBPs can affect the gene expression of TRIM44 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIM44ENSG00000166326.51310.676101015.393100.368202.976601.87000HepG2AATF
TRIM44ENSG00000166326.51177.069801928.98570-0.712607.864506.39020HepG2ABCF1
TRIM44ENSG00000166326.5795.286901571.38540-0.982509.554108.15360HepG2ASCC1
TRIM44ENSG00000166326.5564.753301010.19090-0.838908.282206.61400HepG2BCCIP
TRIM44ENSG00000166326.52594.701901895.636500.452805.026504.25100HepG2BOP1
TRIM44ENSG00000166326.51525.519902126.61000-0.479303.343402.26320HepG2CCAR1
TRIM44ENSG00000166326.5587.286501492.90320-1.3460013.7753012.19810HepG2CIRBP
TRIM44ENSG00000166326.51690.720101462.930200.208702.429101.79780HepG2CKAP4
TRIM44ENSG00000166326.5925.970701137.53590-0.296902.433001.48110HepG2YBX3
TRIM44ENSG00000166326.51531.740101275.560600.263902.967002.30540HepG2CELF1
TRIM44ENSG00000166326.52047.301101371.337300.5780011.4001010.05720HepG2DAZAP1
TRIM44ENSG00000166326.5751.60200993.24590-0.402202.465001.73060HepG2DDX55
TRIM44ENSG00000166326.5731.611301399.86040-0.9361023.9359022.42640HepG2DKC1
TRIM44ENSG00000166326.5882.047501107.14360-0.327904.202003.43020HepG2DNAJC2
TRIM44ENSG00000166326.51205.019201660.47310-0.462503.058002.38650HepG2EIF4A3
TRIM44ENSG00000166326.52391.332001616.401100.564904.186303.34950HepG2EIF4B
TRIM44ENSG00000166326.51593.687301353.083700.236002.726801.89480HepG2EIF4G1
TRIM44ENSG00000166326.51150.594301429.84580-0.313502.590601.78340HepG2EWSR1
TRIM44ENSG00000166326.51416.984001067.618900.408303.870002.54960HepG2FASTKD2
TRIM44ENSG00000166326.52873.109601947.836700.560605.270304.23570HepG2FIP1L1
TRIM44ENSG00000166326.5884.297501302.24240-0.558403.719702.11590HepG2HNRNPA0
TRIM44ENSG00000166326.5619.382401127.60730-0.8644012.4836011.27230HepG2HNRNPA1
TRIM44ENSG00000166326.5998.673101260.39640-0.335803.376502.35800HepG2HNRNPA2B1
TRIM44ENSG00000166326.51029.879101254.28800-0.284401.907201.31950HepG2HNRNPC
TRIM44ENSG00000166326.5958.420801882.57400-0.9740015.7420014.41030HepG2HNRNPLL
TRIM44ENSG00000166326.51030.691301343.99050-0.382903.508202.44520HepG2HNRNPM
TRIM44ENSG00000166326.51073.952301245.99290-0.214401.958201.43900HepG2HNRNPU
TRIM44ENSG00000166326.51698.573002478.08030-0.544904.303002.76050HepG2HSPD1
TRIM44ENSG00000166326.51108.983801564.80200-0.496706.161005.12180HepG2IGF2BP1
TRIM44ENSG00000166326.5982.988201272.73480-0.372705.296504.30760HepG2ILF2
TRIM44ENSG00000166326.51021.681102244.97890-1.1358015.8120013.86750HepG2LARP4
TRIM44ENSG00000166326.51310.158601576.55770-0.267002.012501.31780HepG2MSI2
TRIM44ENSG00000166326.5970.502901669.30230-0.7824011.065909.65740HepG2NSUN2
TRIM44ENSG00000166326.51907.255701579.365800.272103.215002.63410HepG2PTBP1
TRIM44ENSG00000166326.51966.954601378.087700.513208.583407.66090HepG2PUM1
TRIM44ENSG00000166326.52416.519001710.496900.498408.076807.09530HepG2QKI
TRIM44ENSG00000166326.51678.847201216.260600.464902.175601.54420HepG2RAVER1
TRIM44ENSG00000166326.52642.353001925.411100.456607.965107.19170HepG2RBM22
TRIM44ENSG00000166326.51299.228501552.38410-0.256801.967301.39120HepG2RBM25
TRIM44ENSG00000166326.5699.802901111.62460-0.667605.713504.18550HepG2RCC2
TRIM44ENSG00000166326.51041.783501757.68440-0.7546017.9463016.80130HepG2NELFE
TRIM44ENSG00000166326.51349.680601637.04080-0.278503.219402.56070HepG2RECQL
TRIM44ENSG00000166326.51230.954401013.614900.280202.089201.54840HepG2RPS19
TRIM44ENSG00000166326.51125.30510757.832900.570304.299203.34220HepG2RRP9
TRIM44ENSG00000166326.5910.179501892.55140-1.0561013.3730011.82550HepG2SF3A3
TRIM44ENSG00000166326.52503.653801863.344200.426004.291303.43030HepG2SF3B1
TRIM44ENSG00000166326.51427.720301244.839300.197702.295701.64740HepG2SLBP
TRIM44ENSG00000166326.52086.972401281.792800.7031019.2388017.79250HepG2SRSF5
TRIM44ENSG00000166326.51609.628801396.316700.205002.110701.61540HepG2SRSF9
TRIM44ENSG00000166326.5660.541501888.16190-1.5153069.9292068.23180HepG2SSB
TRIM44ENSG00000166326.5960.032001345.15020-0.486603.242102.04540HepG2STIP1
TRIM44ENSG00000166326.51702.513001136.598000.582803.826602.40300HepG2SUB1
TRIM44ENSG00000166326.52082.816701457.683900.5148012.9968011.81420HepG2SUCLG1
TRIM44ENSG00000166326.51038.765101315.36360-0.340602.839601.88690HepG2SUPT6H
TRIM44ENSG00000166326.51397.528701221.545900.194101.793201.31920HepG2TRIM56
TRIM44ENSG00000166326.52595.130301666.308100.639108.376007.28240HepG2U2AF1
TRIM44ENSG00000166326.51926.833401678.405400.199002.206301.57150HepG2UPF1
TRIM44ENSG00000166326.5350.89560905.30160-1.3674015.1681012.79230HepG2UPF2
TRIM44ENSG00000166326.5970.599301337.46970-0.462602.672701.63550HepG2XRCC6
TRIM44ENSG00000166326.5382.50210973.29970-1.3474021.1833019.26180HepG2XRN2
TRIM44ENSG00000166326.51275.444401460.66900-0.195602.024001.43580HepG2ZC3H8
TRIM44ENSG00000166326.51218.716701845.92230-0.5990016.5384015.48150HepG2ZNF622
TRIM44ENSG00000166326.51747.376701214.973300.524203.622002.12000HepG2ZRANB2
TRIM44ENSG00000166326.53104.679903624.56740-0.223403.072502.47900K562AGGF1
TRIM44ENSG00000166326.52935.916503982.74260-0.440005.332403.86160K562AKAP8
TRIM44ENSG00000166326.52957.414403771.49980-0.350803.592702.84450K562AKAP8L
TRIM44ENSG00000166326.53267.449704135.98170-0.340103.955102.42950K562APOBEC3C
TRIM44ENSG00000166326.53202.399103957.16050-0.305304.189703.04340K562ATP5C1
TRIM44ENSG00000166326.53237.567704331.64400-0.420006.352204.53450K562CCDC124
TRIM44ENSG00000166326.51780.673702290.07870-0.363003.329901.91230K562CIRBP
TRIM44ENSG00000166326.53853.524105455.68600-0.501602.295101.34550K562CNOT7
TRIM44ENSG00000166326.54949.206504157.498600.251403.800303.05400K562DDX47
TRIM44ENSG00000166326.53338.308604058.57220-0.281903.896402.83440K562DKC1
TRIM44ENSG00000166326.51901.023701239.585900.616803.931302.70780K562EIF3A
TRIM44ENSG00000166326.51541.573201926.62060-0.321702.765701.94480K562EIF4A3
TRIM44ENSG00000166326.51847.073902596.13530-0.491104.468203.26460K562HNRNPM
TRIM44ENSG00000166326.53149.376504002.59790-0.345903.822502.83020K562KIF1C
TRIM44ENSG00000166326.52869.112503831.39490-0.417305.412803.73500K562MAK16
TRIM44ENSG00000166326.53407.481304483.90760-0.396105.435704.07240K562MBNL1
TRIM44ENSG00000166326.52466.806803271.62060-0.4074012.5211011.09400K562NSUN2
TRIM44ENSG00000166326.51389.412601899.52190-0.451204.528202.65110K562PHF6
TRIM44ENSG00000166326.51993.844502620.85490-0.394503.240201.54310K562PKM
TRIM44ENSG00000166326.51376.035801811.23900-0.396503.279502.46140K562PRPF8
TRIM44ENSG00000166326.51301.331101744.47400-0.422803.813702.72710K562PSIP1
TRIM44ENSG00000166326.53025.226003740.48510-0.306202.362201.85200K562PUS1
TRIM44ENSG00000166326.52522.429103644.38000-0.5309010.668709.52970K562RBM15
TRIM44ENSG00000166326.51651.149002092.07310-0.341502.968402.09490K562RBM22
TRIM44ENSG00000166326.51176.257601591.51700-0.436204.978103.64540K562RCC2
TRIM44ENSG00000166326.51337.387902164.66850-0.694709.402007.98470K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIM44 is not available on ENCORE database.





2 RBPs can affect the splicing of TRIM44 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETRIM44ENSG00000166326.5chr11+357474713574771135706806357068843575697335756993-0.061000.000100.00321excludedK562SRSF1
SETRIM44ENSG00000166326.5chr11+357569733575699335706758357068843582790735828171-0.077000.012090.09440excludedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TRIM44 is not avaliable on ENCORE database.