TMEM8B

General Information

Gene Name       : TMEM8B
Gene ID             : ENSG00000137103.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM8B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM8BENSG00000137103.190.591.330.96ENCSR000AEF
HepG2TMEM8BENSG00000137103.192.711.732.22ENCSR985KAT
K562TMEM8BENSG00000137103.191.260.741.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM8B is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM8B RNA is bound by 5 proteins.  







eCLIP assay for TMEM8B is not avaliable on ENCORE database.





5 proteins are bound to TMEM8B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr93582947935829634+5'-UTR,intron-Distal,intron-Proximal5.3151821.70350HepG2DDX59
chr93581445235814557+5'-UTR4.184933.72434HepG2NCBP2
chr93582943035829521+5'-UTR,intron-Distal,intron-Proximal5.335465.18845K562PCBP1
chr93582971135829891+5'-UTR,intron-Distal,intron-Proximal4.6484112.92627K562HNRNPK
chr93582980735829882+5'-UTR,intron-Distal,intron-Proximal3.9235012.04469HepG2DDX59
chr93582956935829676+5'-UTR,intron-Distal4.999817.46068HepG2HNRNPK
chr93582948435829569+5'-UTR,intron-Distal,intron-Proximal4.269124.80949K562HNRNPK
chr93582956935829671+5'-UTR,intron-Distal4.769126.78870K562HNRNPK
chr93582963435829785+5'-UTR,intron-Distal,intron-Proximal5.3671531.32849HepG2DDX59
chr93582945235829569+5'-UTR,intron-Distal,intron-Proximal4.819246.39924HepG2HNRNPK
chr93581874735818838+intron-Distal3.893933.63122HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM8B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM8B is not available on ENCORE database.

  • 90 RBPs can affect the levels of TMEM8B.  








The Knockdown/knockout RNA-Seq assay for TMEM8B is not available on ENCORE database.





90 RBPs can affect the gene expression of TMEM8B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM8BENSG00000137103.12396.23870187.911201.076207.638206.00230HepG2CCAR1
TMEM8BENSG00000137103.12241.31540161.825900.576402.599101.93000HepG2CPSF6
TMEM8BENSG00000137103.1258.81790128.17730-1.123803.095802.42360HepG2CELF1
TMEM8BENSG00000137103.12196.94480137.755700.515602.524001.81070HepG2DAZAP1
TMEM8BENSG00000137103.12238.94460156.078700.614303.968202.99150HepG2DDX19B
TMEM8BENSG00000137103.12169.7273093.728700.856603.803602.23090HepG2DDX52
TMEM8BENSG00000137103.1297.99100183.76480-0.907103.121302.08390HepG2DDX59
TMEM8BENSG00000137103.12326.22350214.565100.604302.822602.19940HepG2DDX6
TMEM8BENSG00000137103.12249.33160161.462100.626803.442202.69760HepG2DKC1
TMEM8BENSG00000137103.12150.7249083.999200.843402.335301.68300HepG2DNAJC21
TMEM8BENSG00000137103.12521.28190227.757701.1945011.4669010.19190HepG2EIF4A3
TMEM8BENSG00000137103.12114.17990221.86520-0.958403.161002.42870HepG2EIF4B
TMEM8BENSG00000137103.12239.40000164.899800.537702.490701.69760HepG2EWSR1
TMEM8BENSG00000137103.12312.87300213.242000.553002.582001.93900HepG2G3BP1
TMEM8BENSG00000137103.12191.3875080.785101.244206.970505.55800HepG2GEMIN5
TMEM8BENSG00000137103.12184.4215084.804201.120705.782904.89510HepG2HNRNPA1
TMEM8BENSG00000137103.12399.4889094.337502.0822010.215908.95730HepG2HNRNPC
TMEM8BENSG00000137103.12225.15990120.476600.902104.500902.56990HepG2HNRNPD
TMEM8BENSG00000137103.12235.41720134.079800.812005.549104.57570HepG2HNRNPF
TMEM8BENSG00000137103.12377.90400175.065201.110009.131808.06180HepG2HNRNPLL
TMEM8BENSG00000137103.12111.64900207.64260-0.895103.579602.50730HepG2HNRNPM
TMEM8BENSG00000137103.12415.4306093.713202.1482038.8654036.82210HepG2HNRNPU
TMEM8BENSG00000137103.12215.35760132.031300.705803.796202.95900HepG2IGF2BP1
TMEM8BENSG00000137103.12231.48450132.672600.802903.907402.44550HepG2KHDRBS1
TMEM8BENSG00000137103.12166.3712094.888100.810002.946801.69360HepG2LIN28B
TMEM8BENSG00000137103.12113.80430231.31410-1.023303.632502.91840HepG2MATR3
TMEM8BENSG00000137103.12390.28010178.536501.128206.951505.38050HepG2MTPAP
TMEM8BENSG00000137103.12305.93070204.529500.580802.967501.70910HepG2NAA15
TMEM8BENSG00000137103.12187.76780136.601800.458901.983401.33470HepG2NOL12
TMEM8BENSG00000137103.12310.95830155.226401.002204.175803.26180HepG2NSUN2
TMEM8BENSG00000137103.12340.97870210.725000.694203.976203.12110HepG2PABPC4
TMEM8BENSG00000137103.12135.38370228.13690-0.752804.381203.64710HepG2PCBP1
TMEM8BENSG00000137103.12160.3717075.041201.095605.601803.87620HepG2PKM
TMEM8BENSG00000137103.12175.9603083.583201.073903.117602.33910HepG2PPIL4
TMEM8BENSG00000137103.12237.61430138.350200.780205.013804.12530HepG2PUM2
TMEM8BENSG00000137103.12245.22810171.900700.512402.764402.14860HepG2PUS1
TMEM8BENSG00000137103.12584.98380251.393001.2184017.7426016.35550HepG2QKI
TMEM8BENSG00000137103.12196.91270274.43050-0.478902.215901.43770HepG2RBM15
TMEM8BENSG00000137103.12110.98340235.82410-1.087407.661206.89850HepG2RBM22
TMEM8BENSG00000137103.12143.75370228.16910-0.666503.177802.46030HepG2RBM25
TMEM8BENSG00000137103.12202.0134055.128301.873505.936703.42440HepG2RBM39
TMEM8BENSG00000137103.12197.6804088.309801.162406.699405.78940HepG2RPS19
TMEM8BENSG00000137103.12182.22410100.551400.857703.276002.40550HepG2RPS2
TMEM8BENSG00000137103.12246.58540139.799900.818603.891502.94300HepG2RPS3A
TMEM8BENSG00000137103.12330.2148060.688202.4438010.557407.73100HepG2SF1
TMEM8BENSG00000137103.12165.20660280.43830-0.763403.743802.95510HepG2SF3A3
TMEM8BENSG00000137103.12346.29720173.281900.998807.778706.64890HepG2SF3B1
TMEM8BENSG00000137103.12208.50080125.093600.736904.776603.89380HepG2SLBP
TMEM8BENSG00000137103.12165.8751089.614400.888203.190101.47280HepG2SND1
TMEM8BENSG00000137103.12144.5116054.282301.412503.617602.07150HepG2SNRNP200
TMEM8BENSG00000137103.12156.07380252.26640-0.692703.783303.25230HepG2SRSF1
TMEM8BENSG00000137103.12283.50680131.725601.1057010.583609.37370HepG2SRSF7
TMEM8BENSG00000137103.1282.24620205.24290-1.319309.297708.39020HepG2SRSF9
TMEM8BENSG00000137103.12372.82440231.235100.689005.802705.11190HepG2SSB
TMEM8BENSG00000137103.12218.24150146.451500.575403.363002.69050HepG2SUCLG1
TMEM8BENSG00000137103.12293.64900203.173100.531302.395401.51600HepG2SUPT6H
TMEM8BENSG00000137103.12312.6451091.027901.7800020.9856019.84610HepG2TIAL1
TMEM8BENSG00000137103.12115.12980257.48050-1.161204.854204.03550HepG2U2AF1
TMEM8BENSG00000137103.12246.7290063.083101.967506.415304.83310HepG2U2AF2
TMEM8BENSG00000137103.12433.96300248.707100.803008.829007.70080HepG2UPF1
TMEM8BENSG00000137103.12138.8462064.487601.106302.833401.81660HepG2UPF2
TMEM8BENSG00000137103.12222.85420125.227400.831404.009102.68570HepG2XPO5
TMEM8BENSG00000137103.12143.7187069.381201.050503.010502.25450HepG2XRN2
TMEM8BENSG00000137103.12253.85740190.252200.416002.004301.41840HepG2ZC3H8
TMEM8BENSG00000137103.12151.2651080.402100.911703.566502.15890K562ABCF1
TMEM8BENSG00000137103.12608.19000310.071500.9718014.7531013.54970K562AGGF1
TMEM8BENSG00000137103.12443.71400340.752400.380802.309501.42380K562AKAP8
TMEM8BENSG00000137103.12459.26170322.651000.509203.058802.37060K562AKAP8L
TMEM8BENSG00000137103.12472.86720338.552800.482002.760001.84750K562ATP5C1
TMEM8BENSG00000137103.12155.9356092.423900.754502.545001.54240K562CCAR1
TMEM8BENSG00000137103.1286.1245044.088300.965902.469101.47740K562CSTF2
TMEM8BENSG00000137103.12184.97610106.888100.791103.411202.06530K562DDX21
TMEM8BENSG00000137103.12208.13950123.117300.757404.162402.84780K562DDX3X
TMEM8BENSG00000137103.1265.94850143.24770-1.119102.772002.12080K562DDX47
TMEM8BENSG00000137103.12130.2243057.792401.171905.171803.98850K562FIP1L1
TMEM8BENSG00000137103.1236.79520133.77410-1.8622010.720909.61490K562FXR1
TMEM8BENSG00000137103.12168.9654079.702401.083903.691003.01450K562HNRNPC
TMEM8BENSG00000137103.12122.0200071.218200.776702.473601.40480K562HNRNPF
TMEM8BENSG00000137103.12293.59400123.057501.2544012.1450010.29670K562HNRNPU
TMEM8BENSG00000137103.12147.5664072.486001.025503.526402.31410K562IGF2BP2
TMEM8BENSG00000137103.12440.95530327.770000.427802.482901.48210K562MAK16
TMEM8BENSG00000137103.12533.41990383.563500.475702.702401.80770K562MBNL1
TMEM8BENSG00000137103.12201.85430132.931000.602502.922702.15920K562NSUN2
TMEM8BENSG00000137103.12287.31050164.424900.805102.614201.65890K562PABPN1
TMEM8BENSG00000137103.12142.9624071.473701.000103.680702.61830K562PSIP1
TMEM8BENSG00000137103.1280.69500156.30970-0.953903.864402.90470K562PUF60
TMEM8BENSG00000137103.12281.23640150.343700.903402.465701.35830K562SF1
TMEM8BENSG00000137103.12121.8363061.867400.977603.427102.25420K562SRFBP1
TMEM8BENSG00000137103.12214.94230134.387900.677403.603702.55110K562SRPK2
TMEM8BENSG00000137103.12224.08150145.566000.622302.591701.57930K562SRSF4
TMEM8BENSG00000137103.12135.4754068.469600.984403.062601.94610K562SRSF5
TMEM8BENSG00000137103.1245.79070119.91890-1.388906.333805.08470K562SYNCRIP
TMEM8BENSG00000137103.12145.6127073.305800.990004.430203.52930K562TARDBP
TMEM8BENSG00000137103.12132.9076070.719700.910103.657602.69720K562TIA1
TMEM8BENSG00000137103.12170.6813068.738701.312006.754905.23740K562TIAL1
TMEM8BENSG00000137103.12210.5000073.091501.525907.845206.06500K562TRIM56
TMEM8BENSG00000137103.12295.08900120.606001.2907011.9895010.11640K562WDR3
TMEM8BENSG00000137103.1293.5446045.033401.054602.985401.71080K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM8B is not available on ENCORE database.






No RBPs affect the alternative splcing events of TMEM8B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TMEM8B is not avaliable on ENCORE database.