TMED7-TICAM2

General Information

Gene Name       : TMED7-TICAM2
Gene ID             : ENSG00000251201.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMED7-TICAM2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMED7-TICAM2ENSG00000251201.80.000.570.28ENCSR000AEF
HepG2TMED7-TICAM2ENSG00000251201.80.360.540.45ENCSR985KAT
K562TMED7-TICAM2ENSG00000251201.82.732.132.43ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMED7-TICAM2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMED7-TICAM2 RNA is bound by 15 proteins.  







eCLIP assay for TMED7-TICAM2 is not avaliable on ENCORE database.





15 proteins are bound to TMED7-TICAM2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5114961444114961512-3'-UTR,5'-UTR,CDS,intron-Distal4.8970230.19477HepG2RPS3
chr5114961455114961518-3'-UTR,5'-UTR,CDS,intron-Distal4.9970047.26304HepG2DDX3X
chr5114952003114952079-5'-UTR,CDS,intron-Distal,intron-Proximal3.263428.35637HepG2SND1
chr5114961603114961691-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.2126440.43731HepG2DDX3X
chr5114961518114961595-3'-UTR,5'-UTR,intron-Distal5.0367167.18258HepG2DDX3X
chr5114961542114961615-3'-UTR,5'-UTR,intron-Distal3.118715.83673K562SND1
chr5114961631114961697-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.9618412.73259HepG2RPS3
chr5114961515114961593-3'-UTR,5'-UTR,intron-Distal4.9011839.74331HepG2RPS3
chr5114952011114952136-5'-UTR,CDS,intron-Distal,intron-Proximal4.0264911.02166K562SND1
chr5114961616114961697-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.419314.35063K562GEMIN5
chr5114956115114956195-CDS,intron-Distal,intron-Proximal3.716615.36986K562RBM15
chr5114961310114961324-CDS,intron-Distal3.451503.49838K562SND1
chr5114961299114961371-CDS,intron-Distal3.868729.20626HepG2SND1
chr5114956130114956197-CDS,intron-Distal,intron-Proximal4.122566.71529K562IGF2BP1
chr5114961373114961444-CDS,intron-Distal3.9471618.09796HepG2RPS3
chr5114961371114961455-CDS,intron-Distal4.2680148.73182HepG2DDX3X
chr5114952107114952143-CDS,intron-Distal,intron-Proximal3.498743.77917HepG2SND1
chr5114952026114952087-CDS,intron-Distal4.362915.16052K562RBM15
chr5114949825114949888-3'-UTR,intron-Distal4.636975.03175K562IGF2BP1
chr5114950564114950623-3'-UTR,intron-Distal3.410623.46148HepG2TIA1
chr5114950833114950898-3'-UTR,intron-Distal3.0672810.93089K562FAM120A
chr5114949869114949925-3'-UTR,intron-Distal3.631348.45237K562FAM120A
chr5114951599114951705-3'-UTR,intron-Distal,intron-Proximal4.7971310.26194K562IGF2BP1
chr5114944364114944443-intron-Distal4.140953.66668K562KHSRP
chr5114950828114950918-3'-UTR,intron-Distal5.308708.79416HepG2TIA1
chr5114949438114949505-3'-UTR,intron-Distal4.048424.76828K562IGF2BP1
chr5114950826114950917-3'-UTR,intron-Distal3.579973.05548HepG2TIAL1
chr5114950376114950439-3'-UTR,intron-Distal5.1808713.97136K562FAM120A
chr5114949692114949750-3'-UTR,intron-Distal4.7709715.26648K562IGF2BP1
chr5114950803114950903-3'-UTR,intron-Distal3.829608.60023K562TIA1
chr5114951038114951075-3'-UTR,intron-Distal3.161728.97171HepG2FAM120A
chr5114951743114951854-3'-UTR,intron-Distal,intron-Proximal3.760288.76917K562IGF2BP1
chr5114950558114950618-3'-UTR,intron-Distal3.4636115.15930K562TIA1
chr5114951955114952003-CDS,intron-Distal,intron-Proximal3.987386.35450HepG2SND1
chr5114950978114951074-3'-UTR,intron-Distal3.9462117.87060K562FAM120A
chr5114949312114949381-3'-UTR,intron-Distal3.292196.06881K562PUM2
chr5114943342114943382-intron-Distal3.694063.02234K562KHSRP
chr5114942943114942995-intron-Distal3.152833.90146K562KHSRP
chr5114951726114951811-3'-UTR,intron-Distal,intron-Proximal3.682375.19548K562IGF2BP2
chr5114949257114949303-3'-UTR,intron-Distal4.9767611.30955K562PABPC4
chr5114950686114950795-3'-UTR,intron-Distal4.3586314.11369HepG2FUBP3
chr5114950561114950625-3'-UTR,intron-Distal3.692644.98667HepG2UPF1
chr5114951909114952000-CDS,intron-Distal,intron-Proximal3.275354.25038K562SND1
chr5114949647114949692-3'-UTR,intron-Distal4.092868.45080K562IGF2BP1
chr5114950470114950560-3'-UTR,intron-Distal3.3641211.96465K562FAM120A
chr5114950123114950191-3'-UTR,intron-Distal4.8711319.04824K562FAM120A
chr5114943069114943109-intron-Distal3.694063.02234K562KHSRP
chr5114950191114950240-3'-UTR,intron-Distal3.584399.43165K562FAM120A
chr5114950193114950226-3'-UTR,intron-Distal4.803444.56734HepG2FAM120A
chr5114950539114950622-3'-UTR,intron-Distal3.9312618.98472HepG2FAM120A
chr5114951609114951667-3'-UTR,intron-Distal,intron-Proximal4.385315.09622HepG2IGF2BP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMED7-TICAM2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMED7-TICAM2 is not available on ENCORE database.

  • 98 RBPs can affect the levels of TMED7-TICAM2.  








The Knockdown/knockout RNA-Seq assay for TMED7-TICAM2 is not available on ENCORE database.





98 RBPs can affect the gene expression of TMED7-TICAM2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMED7-TICAM2ENSG00000251201.4108.4682047.541001.189904.109802.82880HepG2AATF
TMED7-TICAM2ENSG00000251201.4121.1190051.107801.244702.058601.51940HepG2ACO1
TMED7-TICAM2ENSG00000251201.4479.34110137.450101.802003.415402.83280HepG2AKAP1
TMED7-TICAM2ENSG00000251201.4133.35730301.54760-1.177105.350102.91170HepG2APOBEC3C
TMED7-TICAM2ENSG00000251201.4118.8511052.498001.178705.541404.62720HepG2AUH
TMED7-TICAM2ENSG00000251201.412.5071036.39520-1.541002.472801.62340HepG2BCLAF1
TMED7-TICAM2ENSG00000251201.4197.2614036.903602.418205.475704.66880HepG2BOP1
TMED7-TICAM2ENSG00000251201.434.57790108.04100-1.643705.478204.41120HepG2CIRBP
TMED7-TICAM2ENSG00000251201.473.36450322.87160-2.1378018.4631016.53990HepG2CNOT7
TMED7-TICAM2ENSG00000251201.4650.3504033.863904.2633034.4742032.42010HepG2CPSF6
TMED7-TICAM2ENSG00000251201.413.6780052.58290-1.942703.114802.39810HepG2DDX21
TMED7-TICAM2ENSG00000251201.461.40980131.63660-1.100003.104502.44660HepG2DDX3X
TMED7-TICAM2ENSG00000251201.4706.52150113.149602.6424014.7864013.50950HepG2DDX6
TMED7-TICAM2ENSG00000251201.427.0438058.80210-1.120602.136201.32610HepG2EEF2
TMED7-TICAM2ENSG00000251201.496.6863048.329701.000302.845401.72210HepG2AGO1
TMED7-TICAM2ENSG00000251201.458.70420120.09540-1.032603.240302.54990HepG2EIF4A3
TMED7-TICAM2ENSG00000251201.484.7558042.654200.990503.077601.83330HepG2FAM120A
TMED7-TICAM2ENSG00000251201.4227.2048060.866801.9002013.7633011.54470HepG2FUS
TMED7-TICAM2ENSG00000251201.441.37910121.27450-1.551304.427803.56660HepG2FXR1
TMED7-TICAM2ENSG00000251201.454.39330119.44640-1.134902.975702.05150HepG2G3BP2
TMED7-TICAM2ENSG00000251201.414.0706042.51030-1.595103.232002.25440HepG2GEMIN5
TMED7-TICAM2ENSG00000251201.4153.18100298.91580-0.964505.407703.84870HepG2GRSF1
TMED7-TICAM2ENSG00000251201.4161.72150273.18410-0.756403.651202.06390HepG2HNRNPA0
TMED7-TICAM2ENSG00000251201.4149.79970266.75100-0.832504.465302.67210HepG2HNRNPAB
TMED7-TICAM2ENSG00000251201.4113.09790279.68150-1.306209.483606.83880HepG2HNRNPD
TMED7-TICAM2ENSG00000251201.495.1422049.653900.938103.791302.96430HepG2HNRNPF
TMED7-TICAM2ENSG00000251201.4207.4572075.282901.4623013.6054012.21770HepG2HNRNPL
TMED7-TICAM2ENSG00000251201.416.3263069.60600-2.092006.783405.87230HepG2HNRNPU
TMED7-TICAM2ENSG00000251201.483.3506048.897400.769302.483501.79670HepG2IGF2BP1
TMED7-TICAM2ENSG00000251201.431.58800114.27910-1.855105.904204.95470HepG2IGF2BP2
TMED7-TICAM2ENSG00000251201.416.21380107.32390-2.726704.091602.89890HepG2IGF2BP3
TMED7-TICAM2ENSG00000251201.4179.85960307.81540-0.775202.731901.54910HepG2KHDRBS1
TMED7-TICAM2ENSG00000251201.448.04170121.31730-1.336404.060503.26760HepG2MAGOH
TMED7-TICAM2ENSG00000251201.441.18530121.97950-1.566404.813903.99940HepG2MATR3
TMED7-TICAM2ENSG00000251201.441.98420124.83910-1.572205.191204.33600HepG2NCBP2
TMED7-TICAM2ENSG00000251201.41169.04260295.156201.9857020.8244018.41210HepG2PABPC1
TMED7-TICAM2ENSG00000251201.458.71620126.61080-1.108605.035704.25410HepG2PCBP1
TMED7-TICAM2ENSG00000251201.48.2718039.48000-2.254803.091701.78810HepG2PKM
TMED7-TICAM2ENSG00000251201.492.45880165.07180-0.836203.385001.43380HepG2PPIG
TMED7-TICAM2ENSG00000251201.421.8600062.08210-1.505904.316303.41700HepG2PPIL4
TMED7-TICAM2ENSG00000251201.416.4879060.56090-1.877004.933603.34290HepG2PRPF6
TMED7-TICAM2ENSG00000251201.440.45260128.83450-1.671208.848707.98220HepG2PTBP1
TMED7-TICAM2ENSG00000251201.4127.6074078.264900.705202.638602.05400HepG2PUF60
TMED7-TICAM2ENSG00000251201.425.66670139.52410-2.4425015.0876013.79480HepG2QKI
TMED7-TICAM2ENSG00000251201.4146.0508055.581501.393702.371501.71550HepG2RAVER1
TMED7-TICAM2ENSG00000251201.440.88930126.62970-1.630807.999006.90340HepG2RBM25
TMED7-TICAM2ENSG00000251201.421.1905062.01970-1.549304.029502.74710HepG2RCC2
TMED7-TICAM2ENSG00000251201.464.56670143.37770-1.151005.200404.49690HepG2NELFE
TMED7-TICAM2ENSG00000251201.450.21780133.54170-1.411006.919406.00890HepG2RECQL
TMED7-TICAM2ENSG00000251201.4144.6436053.452201.436102.484901.83200HepG2RPLP0
TMED7-TICAM2ENSG00000251201.427.3703070.44410-1.363903.368102.48540HepG2RPS2
TMED7-TICAM2ENSG00000251201.4110.58640324.36980-1.5525012.9182011.24660HepG2RPS3A
TMED7-TICAM2ENSG00000251201.429.9739061.98400-1.048202.555401.93170HepG2SAFB2
TMED7-TICAM2ENSG00000251201.4139.49270308.04840-1.143006.826404.51470HepG2SBDS
TMED7-TICAM2ENSG00000251201.411.8158046.62900-1.980504.508103.32280HepG2SERBP1
TMED7-TICAM2ENSG00000251201.4210.55330134.127600.650503.118602.49590HepG2SF3B4
TMED7-TICAM2ENSG00000251201.442.5551072.27850-0.764201.879901.33240HepG2SMN1
TMED7-TICAM2ENSG00000251201.4312.7886040.286602.9567010.386208.87980HepG2SNRNP70
TMED7-TICAM2ENSG00000251201.4318.5814056.894302.4852015.4731014.54230HepG2SRFBP1
TMED7-TICAM2ENSG00000251201.437.20710140.00250-1.9118010.9744010.16840HepG2SRSF1
TMED7-TICAM2ENSG00000251201.4106.1205048.774701.121405.159304.25620HepG2SRSF7
TMED7-TICAM2ENSG00000251201.4261.37790113.901501.1983011.2162010.23660HepG2SRSF9
TMED7-TICAM2ENSG00000251201.416.9400049.40980-1.544401.859801.41810HepG2SSB
TMED7-TICAM2ENSG00000251201.4154.32970282.22010-0.870805.134103.58730HepG2STIP1
TMED7-TICAM2ENSG00000251201.4152.0153051.946901.549006.378604.58390HepG2SUB1
TMED7-TICAM2ENSG00000251201.4263.81170171.458600.621502.597301.31640HepG2SUGP2
TMED7-TICAM2ENSG00000251201.4144.6110045.994801.6525010.466908.74630HepG2SUPT6H
TMED7-TICAM2ENSG00000251201.484.77430166.31790-0.972203.044901.92840HepG2TBRG4
TMED7-TICAM2ENSG00000251201.414.0600067.61490-2.265707.858107.09410HepG2TIAL1
TMED7-TICAM2ENSG00000251201.4184.2068058.230301.6614010.296609.06780HepG2U2AF1
TMED7-TICAM2ENSG00000251201.4436.2065081.044602.4281010.454408.43930HepG2U2AF2
TMED7-TICAM2ENSG00000251201.4108.3563066.522700.703802.262301.62020HepG2UPF1
TMED7-TICAM2ENSG00000251201.47.1774064.22520-3.1616010.442109.39770HepG2UTP3
TMED7-TICAM2ENSG00000251201.4121.18940290.54760-1.261508.906906.96660HepG2XPO5
TMED7-TICAM2ENSG00000251201.416.2933040.36060-1.308702.117901.47590HepG2XRN2
TMED7-TICAM2ENSG00000251201.4373.24070228.509800.707704.369502.80800K562ABCF1
TMED7-TICAM2ENSG00000251201.4102.13360279.34070-1.451607.238506.38390K562AGGF1
TMED7-TICAM2ENSG00000251201.4165.11930290.66170-0.815805.309904.38910K562AKAP8L
TMED7-TICAM2ENSG00000251201.4798.80600235.761501.7604030.1348028.40090K562AQR
TMED7-TICAM2ENSG00000251201.4317.98620152.795501.057303.722902.70950K562BOP1
TMED7-TICAM2ENSG00000251201.4227.66690333.84380-0.552203.476702.13520K562CCDC124
TMED7-TICAM2ENSG00000251201.4347.64930162.455801.097503.424202.54940K562CPSF6
TMED7-TICAM2ENSG00000251201.471.23440131.90740-0.888903.782002.53780K562DDX3X
TMED7-TICAM2ENSG00000251201.4232.63610312.80420-0.427202.189201.42030K562DKC1
TMED7-TICAM2ENSG00000251201.4361.83080137.805001.392602.719301.90500K562EIF4A3
TMED7-TICAM2ENSG00000251201.4259.40610137.425000.916506.392204.25140K562FUS
TMED7-TICAM2ENSG00000251201.4304.66760170.636200.836204.656803.68680K562G3BP2
TMED7-TICAM2ENSG00000251201.4129.27560264.16400-1.031004.094102.52030K562HNRNPA2B1
TMED7-TICAM2ENSG00000251201.4275.90290135.065901.030406.487004.97040K562HNRNPM
TMED7-TICAM2ENSG00000251201.489.19980185.61580-1.057206.481005.10540K562HNRNPU
TMED7-TICAM2ENSG00000251201.4156.22070308.48230-0.981607.842106.27720K562KIF1C
TMED7-TICAM2ENSG00000251201.4213.01780132.454200.685402.525001.63570K562KRR1
TMED7-TICAM2ENSG00000251201.4110.62040209.60780-0.922105.613404.23720K562MATR3
TMED7-TICAM2ENSG00000251201.4235.24190345.57560-0.554903.715602.63570K562MBNL1
TMED7-TICAM2ENSG00000251201.4141.59030242.22190-0.774603.282002.30570K562NAA15
TMED7-TICAM2ENSG00000251201.478.94360231.12890-1.549804.567703.20750K562PABPN1
TMED7-TICAM2ENSG00000251201.495.50780186.88380-0.968504.813303.51430K562PCBP2
TMED7-TICAM2ENSG00000251201.4120.77440274.84580-1.186304.885602.77930K562PPP1R8
TMED7-TICAM2ENSG00000251201.496.85640204.03430-1.074904.072603.28190K562PTBP1
TMED7-TICAM2ENSG00000251201.4962.67390315.265401.6104028.8120026.18920K562PUF60
TMED7-TICAM2ENSG00000251201.4482.44140328.554300.554102.848001.87380K562PUM2
TMED7-TICAM2ENSG00000251201.4105.02290288.29250-1.4568011.6868010.61860K562PUS1
TMED7-TICAM2ENSG00000251201.4157.12670280.86790-0.838005.770104.94020K562RBM15
TMED7-TICAM2ENSG00000251201.4385.19600189.289801.024908.247606.89760K562SF3A3
TMED7-TICAM2ENSG00000251201.4296.10180177.396800.739005.215104.01910K562SF3B4
TMED7-TICAM2ENSG00000251201.464.83540257.78050-1.9913010.688807.58360K562SFPQ
TMED7-TICAM2ENSG00000251201.492.00520168.43970-0.872403.034601.91980K562SRSF4
TMED7-TICAM2ENSG00000251201.4321.33280192.206100.741304.405302.53850K562TRIP6
TMED7-TICAM2ENSG00000251201.4482.26620165.362801.544108.176006.13760K562U2AF1
TMED7-TICAM2ENSG00000251201.4645.12990170.796601.9172011.9308010.24410K562U2AF2
TMED7-TICAM2ENSG00000251201.4382.84890203.324800.912906.731205.66460K562UPF1
TMED7-TICAM2ENSG00000251201.4301.80410131.287901.200804.265702.76670K562UTP3
TMED7-TICAM2ENSG00000251201.4406.80710265.611000.614904.133903.04240K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMED7-TICAM2 is not available on ENCORE database.





1 RBPs can affect the splicing of TMED7-TICAM2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXETMED7-TICAM2ENSG00000251201.4chr5-114952014114952142114956131114956377114914347114917012114961297114961711-0.077000.000080.008182includedHepG2AKAP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMED7-TICAM2 is not avaliable on ENCORE database.