TCFL5

General Information

Gene Name       : TCFL5
Gene ID             : ENSG00000101190.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TCFL5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TCFL5ENSG00000101190.123.963.433.70ENCSR000AEF
HepG2TCFL5ENSG00000101190.1212.7018.3815.54ENCSR985KAT
K562TCFL5ENSG00000101190.124.245.304.77ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TCFL5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TCFL5 RNA is bound by 26 proteins.  







eCLIP assay for TCFL5 is not avaliable on ENCORE database.





26 proteins are bound to TCFL5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr206147275661472880-3'-UTR,intron-Distal5.170347.24234K562FAM120A
chr206149286061492895-5'-UTR,CDS,intron-Distal3.627464.38588HepG2DDX3X
chr206149292361492988-5'-UTR,CDS,intron-Distal4.0479511.21395HepG2DDX3X
chr206149290361493051-5'-UTR,CDS,intron-Distal4.291603.94554K562XRN2
chr206149162161491743-CDS,intron-Distal,intron-Proximal3.263925.47455K562SMNDC1
chr206149240161492459-CDS,intron-Distal3.384424.65702K562GEMIN5
chr206149253961492630-CDS,intron-Distal3.038126.93942HepG2PPIG
chr206149256461492620-CDS,intron-Distal3.554213.91320HepG2RBM15
chr206149163961491725-CDS,intron-Distal,intron-Proximal4.170014.69223K562SF3B4
chr206148874861488958-CDS,intron-Distal3.053585.22575K562UCHL5
chr206148885761488926-CDS,intron-Distal3.070783.47879HepG2PPIG
chr206148433961484390-intron-Distal4.9319141.83675K562DDX51
chr206148418161484255-intron-Distal3.562025.02933K562CSTF2T
chr206148429961484467-intron-Distal3.491876.31222HepG2PTBP1
chr206148452561484568-intron-Distal3.289293.44343HepG2AKAP1
chr206149227861492345-intron-Distal3.999724.96634HepG2PPIG
chr206148439461484489-intron-Distal3.706653.33095HepG2IGF2BP3
chr206148432761484445-intron-Distal3.153996.28726K562EIF4G2
chr206148275961482832-intron-Distal3.605713.30829HepG2CSTF2
chr206148430661484377-intron-Distal4.809245.14122HepG2PCBP2
chr206148408161484150-intron-Distal3.258093.44195K562TARDBP
chr206148430061484339-intron-Distal4.6188228.09324K562DDX51
chr206148430361484384-intron-Distal3.720203.34442K562FUS
chr206148433961484483-intron-Distal4.268389.26207K562AKAP1
chr206148439061484504-intron-Distal4.9059356.97613K562DDX51
chr206149228061492343-intron-Distal3.221064.52495HepG2XRN2
chr206148421361484265-intron-Distal5.0217122.54086K562DDX51
chr206148421561484362-intron-Distal3.6934511.95656K562TARDBP
chr206148452061484567-intron-Distal6.4789713.42366K562DDX51
chr206148439761484492-intron-Distal4.0788815.21861HepG2AKAP1
chr206148292661482983-intron-Distal3.519554.30679K562KHSRP
chr206148430361484346-intron-Distal5.331329.73101HepG2AKAP1
chr206148285361482926-intron-Distal5.043779.15655K562KHSRP
chr206148998561490044-intron-Distal3.833214.70992HepG2DDX59
chr206148430461484346-intron-Distal3.985423.77743K562DDX52
chr206148417861484206-intron-Distal3.927327.17506K562DDX51
chr206148428861484481-intron-Distal4.0218410.49064K562EWSR1
chr206148386761484004-intron-Distal3.077873.73766HepG2SFPQ
chr206148417761484274-intron-Distal3.785245.27813K562EWSR1
chr206148414361484273-intron-Distal5.3761711.05965HepG2AKAP1
chr206148905361489130-intron-Distal,intron-Proximal3.406164.30679K562KHSRP
chr206149054161490663-intron-Distal,intron-Proximal4.419644.64592HepG2HNRNPM
chr206148434661484397-intron-Distal4.7168812.51074HepG2AKAP1
chr206148922661489276-intron-Distal4.080363.42844K562KHSRP
chr206148996761490042-intron-Distal3.701695.09513HepG2HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TCFL5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TCFL5 is not available on ENCORE database.

  • 92 RBPs can affect the levels of TCFL5.  








The Knockdown/knockout RNA-Seq assay for TCFL5 is not available on ENCORE database.





92 RBPs can affect the gene expression of TCFL5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TCFL5ENSG00000101190.8365.57880740.99860-1.019308.026407.17150HepG2AKAP1
TCFL5ENSG00000101190.8246.32380376.26710-0.611203.194302.07780HepG2AKAP8
TCFL5ENSG00000101190.8420.15180749.72990-0.8355012.8675011.58120HepG2AUH
TCFL5ENSG00000101190.8238.63420345.25780-0.532902.367901.53860HepG2BCLAF1
TCFL5ENSG00000101190.8304.63670408.74690-0.424102.187901.65030HepG2BOP1
TCFL5ENSG00000101190.8341.69360484.06450-0.502503.473602.62310HepG2CALR
TCFL5ENSG00000101190.8234.64860421.78070-0.846009.806108.70840HepG2CKAP4
TCFL5ENSG00000101190.8172.57670328.57600-0.929004.809103.79490HepG2CNOT7
TCFL5ENSG00000101190.8503.67740661.98450-0.394302.863002.21150HepG2CELF1
TCFL5ENSG00000101190.8564.66730711.76270-0.334003.006202.23810HepG2DAZAP1
TCFL5ENSG00000101190.8282.77700391.66060-0.469902.629501.96580HepG2DDX21
TCFL5ENSG00000101190.8445.37120709.88430-0.672604.329503.56170HepG2DDX3X
TCFL5ENSG00000101190.8223.44070390.63900-0.805904.600903.63040HepG2DDX55
TCFL5ENSG00000101190.8271.31280426.12610-0.651302.694301.73120HepG2DDX59
TCFL5ENSG00000101190.8410.70330609.65540-0.569903.423802.74470HepG2DDX6
TCFL5ENSG00000101190.8330.19220432.59500-0.389702.481901.81160HepG2DNAJC21
TCFL5ENSG00000101190.8270.56530428.77440-0.664206.895205.93080HepG2DNAJC2
TCFL5ENSG00000101190.8266.02740400.03160-0.588503.500202.24590HepG2EFTUD2
TCFL5ENSG00000101190.8345.59760586.22530-0.762405.359304.55100HepG2EIF2S1
TCFL5ENSG00000101190.8238.10430389.52250-0.710104.106903.02020HepG2EIF3D
TCFL5ENSG00000101190.8450.01480630.70350-0.487002.315801.68370HepG2EIF4B
TCFL5ENSG00000101190.8512.31100702.22610-0.454904.360903.35340HepG2EIF4G1
TCFL5ENSG00000101190.8500.94150672.68260-0.425302.771601.95550HepG2EIF4G2
TCFL5ENSG00000101190.8313.43070412.24940-0.395402.200501.45620HepG2EWSR1
TCFL5ENSG00000101190.8232.19370348.09280-0.584103.793102.40120HepG2FAM120A
TCFL5ENSG00000101190.8452.00020653.50620-0.531903.435102.66920HepG2FXR1
TCFL5ENSG00000101190.8365.01330606.33730-0.732205.172204.27480HepG2G3BP1
TCFL5ENSG00000101190.8232.97290346.82600-0.574102.986402.05380HepG2GEMIN5
TCFL5ENSG00000101190.8295.41820425.37710-0.526002.684902.05280HepG2GPKOW
TCFL5ENSG00000101190.8325.80620436.73940-0.422802.273201.68280HepG2HNRNPA1
TCFL5ENSG00000101190.8295.97120485.79160-0.714905.424104.48070HepG2HNRNPC
TCFL5ENSG00000101190.8378.72990476.51490-0.331401.941701.33430HepG2HNRNPF
TCFL5ENSG00000101190.8333.52810613.70410-0.879707.580306.46870HepG2HNRNPK
TCFL5ENSG00000101190.8494.86160648.35130-0.389803.639902.87400HepG2HNRNPL
TCFL5ENSG00000101190.8243.44370405.94520-0.737704.853104.04320HepG2HNRNPLL
TCFL5ENSG00000101190.8265.41060482.57990-0.8625010.805209.67410HepG2HNRNPU
TCFL5ENSG00000101190.8376.18330616.36940-0.712404.865303.99270HepG2IGF2BP2
TCFL5ENSG00000101190.8358.39820492.93940-0.459804.144503.26450HepG2ILF2
TCFL5ENSG00000101190.8317.51840436.53170-0.459202.369301.32390HepG2LARP7
TCFL5ENSG00000101190.8316.83210458.49950-0.533202.997101.73220HepG2LIN28B
TCFL5ENSG00000101190.8396.39050653.73330-0.721803.710302.95090HepG2MAGOH
TCFL5ENSG00000101190.8304.82960657.42760-1.108809.089707.99950HepG2MATR3
TCFL5ENSG00000101190.8247.72030407.68610-0.718702.659501.62720HepG2METAP2
TCFL5ENSG00000101190.8429.64130672.94250-0.647404.180903.40750HepG2NCBP2
TCFL5ENSG00000101190.8518.27310705.78420-0.445503.853502.95290HepG2NOL12
TCFL5ENSG00000101190.8222.18110358.66170-0.690902.608001.54890HepG2NONO
TCFL5ENSG00000101190.8363.00360599.43150-0.723604.853703.90820HepG2PABPC4
TCFL5ENSG00000101190.8389.65280567.00880-0.541205.280104.48480HepG2PCBP1
TCFL5ENSG00000101190.8236.16180480.28490-1.024106.636005.08360HepG2PCBP2
TCFL5ENSG00000101190.8149.92880301.39690-1.007406.224805.06460HepG2PRPF8
TCFL5ENSG00000101190.8267.01570576.96240-1.1116016.5058015.38450HepG2PTBP1
TCFL5ENSG00000101190.8272.01530673.74200-1.3085019.7424018.34490HepG2PUF60
TCFL5ENSG00000101190.8452.53830715.21760-0.660309.679708.71130HepG2PUM1
TCFL5ENSG00000101190.8491.97000714.68850-0.538704.980204.09440HepG2PUM2
TCFL5ENSG00000101190.8220.28660429.75040-0.9641012.0681010.93840HepG2PUS1
TCFL5ENSG00000101190.8487.98530624.84380-0.356702.416401.82630HepG2QKI
TCFL5ENSG00000101190.8264.26880463.57300-0.810803.913003.07910HepG2RAVER1
TCFL5ENSG00000101190.8383.97890719.44980-0.9059013.2063012.24200HepG2RBM22
TCFL5ENSG00000101190.8297.72170513.25110-0.785706.754205.75430HepG2RPLP0
TCFL5ENSG00000101190.8188.93010379.00250-1.004408.852707.82750HepG2RPS19
TCFL5ENSG00000101190.8126.60640298.14890-1.235708.139706.87880HepG2RRP9
TCFL5ENSG00000101190.8242.80190380.41980-0.647804.093202.95360HepG2SERBP1
TCFL5ENSG00000101190.8284.93390639.13420-1.1655011.242009.82080HepG2SF3A3
TCFL5ENSG00000101190.8361.94260600.67490-0.730808.537307.58760HepG2SF3B4
TCFL5ENSG00000101190.8527.68110646.03550-0.291902.193301.55670HepG2SLBP
TCFL5ENSG00000101190.8354.78220501.17170-0.498404.816604.00590HepG2SMN1
TCFL5ENSG00000101190.8258.59020472.20230-0.868706.179304.70490HepG2SMNDC1
TCFL5ENSG00000101190.8360.72720812.59890-1.1716025.3952024.27590HepG2SRFBP1
TCFL5ENSG00000101190.8321.57120626.98160-0.9633013.7781012.89590HepG2SRSF1
TCFL5ENSG00000101190.8266.30210432.34430-0.699103.833002.63450HepG2SRSF3
TCFL5ENSG00000101190.8448.29540665.23490-0.569406.197405.31350HepG2SRSF5
TCFL5ENSG00000101190.8345.20720468.14350-0.439503.070302.34320HepG2SRSF7
TCFL5ENSG00000101190.8575.69190705.54010-0.293402.319201.84020HepG2SSB
TCFL5ENSG00000101190.8578.00780756.54430-0.388303.874303.16060HepG2SUCLG1
TCFL5ENSG00000101190.8740.81150563.575300.394403.405002.79300HepG2TAF15
TCFL5ENSG00000101190.8255.56420468.91740-0.875609.091208.27690HepG2TIAL1
TCFL5ENSG00000101190.8299.08940473.10820-0.661607.072106.24290HepG2TRIM56
TCFL5ENSG00000101190.8519.29450658.23490-0.342002.102001.34930HepG2TUFM
TCFL5ENSG00000101190.8274.71820477.93170-0.798905.635004.75510HepG2U2AF1
TCFL5ENSG00000101190.8236.13010710.66460-1.589603.159802.10410HepG2U2AF2
TCFL5ENSG00000101190.8487.27680696.74280-0.515903.040502.16520HepG2UBE2L3
TCFL5ENSG00000101190.8418.51280566.81430-0.437603.850703.04660HepG2UPF1
TCFL5ENSG00000101190.8417.92060547.23700-0.388902.664402.07700HepG2UTP3
TCFL5ENSG00000101190.8255.82390381.55680-0.576704.690903.85460HepG2ZC3H8
TCFL5ENSG00000101190.8377.15680623.38730-0.7250010.616709.71910HepG2ZNF622
TCFL5ENSG00000101190.8234.87310349.16570-0.572003.828603.17980K562AGGF1
TCFL5ENSG00000101190.8242.76710363.31750-0.581703.595302.84670K562AKAP8L
TCFL5ENSG00000101190.8306.56890218.849000.486202.519501.77000K562CPSF6
TCFL5ENSG00000101190.8519.64730406.412000.354502.483401.86100K562DDX47
TCFL5ENSG00000101190.8126.70980194.33290-0.617002.487401.62450K562EFTUD2
TCFL5ENSG00000101190.8134.31150228.95780-0.769503.747202.28530K562HNRNPK
TCFL5ENSG00000101190.8143.74440236.23520-0.716703.687702.02870K562LARP7
TCFL5ENSG00000101190.8177.70660302.76720-0.768703.671902.62110K562NAA15
TCFL5ENSG00000101190.8120.53000214.36710-0.830704.304203.07950K562PCBP2
TCFL5ENSG00000101190.8106.75400189.10850-0.824903.471502.63020K562PRPF8
TCFL5ENSG00000101190.8171.41570234.09060-0.449602.038201.45190K562PTBP1
TCFL5ENSG00000101190.8133.64600360.34850-1.4310013.5521012.39650K562PUS1
TCFL5ENSG00000101190.8238.77810351.07450-0.556103.551702.89360K562RBM15
TCFL5ENSG00000101190.8171.54430326.25100-0.927403.163801.49020K562RBM39
TCFL5ENSG00000101190.8108.47010190.71650-0.814104.247403.18280K562SF3B4
TCFL5ENSG00000101190.8124.15760183.58970-0.564302.342701.60430K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TCFL5 is not available on ENCORE database.





12 RBPs can affect the splicing of TCFL5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETCFL5ENSG00000101190.8chr20-614840746148424061472466614734496148536761485509-0.407000.000940.08983excludedK562FMR1
SETCFL5ENSG00000101190.8chr20-614840746148424061472466614734496148536761485509-0.153000.000020.00400excludedHepG2TBRG4
SETCFL5ENSG00000101190.8chr20-6148407461484240614724666147344961485367614855090.486000.000090.00228includedK562PUS1
SETCFL5ENSG00000101190.8chr20-614840746148424061472466614734496148536761485509-0.426000.000490.08141excludedK562GPKOW
SETCFL5ENSG00000101190.8chr20-614887466148899061485367614855096149147661491660-0.179000.001430.04031excludedHepG2SF3A3
SETCFL5ENSG00000101190.8chr20-614887466148899061485367614855096149147661491660-0.125000.000320.04400excludedHepG2SSB
SETCFL5ENSG00000101190.8chr20-614840746148424061472466614734496148536761485509-0.405000.000490.05354excludedK562CPSF6
SETCFL5ENSG00000101190.8chr20-614840746148424061472466614734496148536761485509-0.501000.000030.00243excludedK562SF3B1
SETCFL5ENSG00000101190.8chr20-614840746148424061472466614734496148536761485509-0.128000.001640.06258excludedHepG2HNRNPU
SETCFL5ENSG00000101190.8chr20-6148407461484240614724666147344961485367614855090.340000.001290.04900includedK562PTBP1
MXETCFL5ENSG00000101190.8chr20-61485367614855096149071561490878614724666147344961491476614916600.325000.003540.056991includedHepG2FTO
MXETCFL5ENSG00000101190.8chr20-61484074614842406148536761485509614724666147344961488746614889900.098000.000070.044811includedK562ABCF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TCFL5 is not avaliable on ENCORE database.