SUPT3H

General Information

Gene Name : SUPT3H
Gene ID : ENSG00000196284.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SUPT3H)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SUPT3H	ENSG00000196284.15	2.30	1.08	1.69	ENCSR000AEF
HepG2	SUPT3H	ENSG00000196284.15	15.46	15.67	15.57	ENCSR985KAT
K562	SUPT3H	ENSG00000196284.15	11.24	10.62	10.93	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SUPT3H is not avaliable on ENCORE database.

Proteins bound to RNA

SUPT3H RNA is bound by 24 proteins.

CanvasJS.com

eCLIP assay for SUPT3H is not avaliable on ENCORE database.

24 proteins are bound to SUPT3H RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	45273870	45273928	-	intron-Distal	5.40661	43.21018	HepG2	HNRNPM
chr6	45288544	45288666	-	intron-Distal	7.67662	42.86173	K562	QKI
chr6	45273433	45273516	-	intron-Distal	6.31621	41.39160	K562	EXOSC5
chr6	45273872	45273995	-	intron-Distal	7.30133	39.90531	K562	EXOSC5
chr6	45273561	45273716	-	intron-Distal	5.63928	33.70209	K562	EXOSC5
chr6	45182748	45182826	-	intron-Distal	5.73631	26.37628	HepG2	HNRNPM
chr6	45274031	45274090	-	intron-Distal	5.85886	26.18409	HepG2	HNRNPM
chr6	45232454	45232525	-	intron-Distal	4.72165	25.60706	HepG2	PTBP1
chr6	45307816	45307895	-	intron-Distal	4.71377	24.42971	HepG2	QKI
chr6	45282469	45282518	-	intron-Distal	6.56383	24.37086	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 359 entries

eCLIP assay for SUPT3H is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SUPT3H is not available on ENCORE database.
86 RBPs can affect the levels of SUPT3H.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SUPT3H is not available on ENCORE database.

86 RBPs can affect the gene expression of SUPT3H :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SUPT3H	ENSG00000196284.9	148.76120	836.27160	-2.49100	78.93110	77.19940	HepG2	SRSF1
SUPT3H	ENSG00000196284.9	231.12770	865.91920	-1.90550	34.38940	32.45490	HepG2	DDX3X
SUPT3H	ENSG00000196284.9	286.49870	756.27860	-1.40040	31.96470	30.29170	HepG2	PCBP1
SUPT3H	ENSG00000196284.9	293.46880	769.53600	-1.39080	31.06020	29.62560	HepG2	PTBP1
SUPT3H	ENSG00000196284.9	227.09050	820.93460	-1.85400	31.29500	29.35200	HepG2	NCBP2
SUPT3H	ENSG00000196284.9	71.29230	349.98290	-2.29550	30.78460	28.43140	K562	SRSF1
SUPT3H	ENSG00000196284.9	357.15790	856.42450	-1.26180	26.96720	25.63400	HepG2	NELFE
SUPT3H	ENSG00000196284.9	231.36860	802.03470	-1.79350	27.32470	25.51560	HepG2	MATR3
SUPT3H	ENSG00000196284.9	364.43100	801.19670	-1.13650	22.08460	20.67930	HepG2	SF3B4
SUPT3H	ENSG00000196284.9	158.42750	448.51560	-1.50130	15.98800	14.73550	K562	AQR
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 103 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SUPT3H is not available on ENCORE database.

3 RBPs can affect the splicing of SUPT3H :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SUPT3H	ENSG00000196284.9	chr6	-	44917779	44917920	44900389	44900500	44921046	44921154	0.26000	0.00000	0.00000	included	HepG2	SRSF1
SE	SUPT3H	ENSG00000196284.9	chr6	-	44982537	44982628	44971389	44971529	44988282	44988369	-0.09300	0.00049	0.01802	excluded	K562	AKAP8L
SE	SUPT3H	ENSG00000196284.9	chr6	-	44922231	44922344	44921046	44921154	44929489	44929565	-0.17300	0.00728	0.09646	excluded	K562	U2AF2

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SUPT3H

General Information

Functions

Localization

Domains (AlphaFold: SUPT3H)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SUPT3H is not avaliable on ENCORE database.

24 proteins are bound to SUPT3H RNA:

eCLIP assay for SUPT3H is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SUPT3H is not available on ENCORE database.

86 RBPs can affect the gene expression of SUPT3H :

The Knockdown/knockout RNA-Seq assay for SUPT3H is not available on ENCORE database.

3 RBPs can affect the splicing of SUPT3H :

The Knockdown/knockout RNA-Seq assay for SUPT3H is not avaliable on ENCORE database.