SAR1B

General Information

Gene Name       : SAR1B
Gene ID             : ENSG00000152700.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SAR1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SAR1BENSG00000152700.1332.3723.3327.85ENCSR000AEF
HepG2SAR1BENSG00000152700.1341.7642.1541.95ENCSR985KAT
K562SAR1BENSG00000152700.1345.6035.6240.61ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SAR1B is not avaliable on ENCORE database.



Proteins bound to RNA
  • SAR1B RNA is bound by 12 proteins.  







eCLIP assay for SAR1B is not avaliable on ENCORE database.





12 proteins are bound to SAR1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5133944103133944194-3'-UTR,CDS,intron-Distal,intron-Proximal3.280003.41653K562SND1
chr5133940844133940925-3'-UTR,intron-Distal4.909536.04270K562FAM120A
chr5133942718133942757-3'-UTR,CDS,intron-Distal,intron-Proximal4.176663.02457HepG2BCLAF1
chr5133956658133956722-3'-UTR,CDS,intron-Distal,intron-Proximal3.206114.56058HepG2BCLAF1
chr5133944097133944190-3'-UTR,CDS,intron-Distal3.004103.59602K562UCHL5
chr5133936853133936952-3'-UTR,intron-Distal4.186015.98925HepG2FUBP3
chr5133944053133944118-3'-UTR,CDS,intron-Distal,intron-Proximal3.526885.97823HepG2BCLAF1
chr5133944099133944194-3'-UTR,CDS,intron-Distal,intron-Proximal3.009303.40321HepG2GRWD1
chr5133942349133942409-3'-UTR,intron-Distal,intron-Proximal3.314783.38325HepG2IGF2BP1
chr5133942336133942414-3'-UTR,intron-Distal,intron-Proximal3.815045.73713K562IGF2BP1
chr5133942557133942675-3'-UTR,CDS,intron-Distal,intron-Proximal3.844363.39858K562IGF2BP2
chr5133968414133968493-5'-UTR,intron-Distal,intron-Proximal3.136603.06445HepG2EIF3D
chr5133959699133959728-5'-UTR,CDS,intron-Distal,intron-Proximal3.270924.32211K562DDX3X
chr5133968417133968498-5'-UTR,intron-Distal,intron-Proximal3.256167.39484K562DDX3X
chr5133959651133959730-5'-UTR,CDS,intron-Distal,intron-Proximal3.698833.14999HepG2GRWD1
chr5133968371133968442-5'-UTR,intron-Distal3.249339.05128HepG2PRPF8
chr5133945264133945331-CDS,intron-Distal,intron-Proximal4.286193.19000HepG2SND1
chr5133959650133959699-CDS,intron-Distal,intron-Proximal3.200665.59242K562DDX3X
chr5133945259133945334-CDS,intron-Distal,intron-Proximal3.823466.19411K562SND1
chr5133968331133968402-intron-Distal4.603316.99120K562AQR
chr5133968402133968418-intron-Distal3.699633.04871K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SAR1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SAR1B is not available on ENCORE database.

  • 83 RBPs can affect the levels of SAR1B.  








The Knockdown/knockout RNA-Seq assay for SAR1B is not available on ENCORE database.





83 RBPs can affect the gene expression of SAR1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SAR1BENSG00000152700.9877.857801237.82920-0.495808.334307.39400HepG2ACO1
SAR1BENSG00000152700.91567.107602455.94810-0.648206.366305.59640HepG2AKAP1
SAR1BENSG00000152700.91443.27770977.374600.562305.376304.16250HepG2BCLAF1
SAR1BENSG00000152700.91479.46300764.425300.9525016.1028014.83090HepG2BOP1
SAR1BENSG00000152700.91205.83360934.858900.367103.306902.47330HepG2CALR
SAR1BENSG00000152700.92821.813901930.630100.547506.134005.01130HepG2CIRBP
SAR1BENSG00000152700.91910.778001661.712900.201402.446401.74370HepG2DAZAP1
SAR1BENSG00000152700.9902.268901144.83700-0.343504.481703.45240HepG2DDX19B
SAR1BENSG00000152700.91190.07130857.281100.473102.842001.66750HepG2DDX1
SAR1BENSG00000152700.91305.11160916.618000.509705.146104.24870HepG2DDX21
SAR1BENSG00000152700.91166.01870896.576000.379003.313102.30860HepG2DDX24
SAR1BENSG00000152700.9661.468901034.76200-0.645604.087302.55750HepG2DDX27
SAR1BENSG00000152700.93078.839302352.625900.388003.155902.49260HepG2DDX3X
SAR1BENSG00000152700.91150.88070810.767800.505304.771003.49980HepG2DHX30
SAR1BENSG00000152700.91971.033901184.279700.7348018.9012017.49390HepG2DKC1
SAR1BENSG00000152700.9579.01280833.11790-0.524906.071205.16010HepG2DNAJC2
SAR1BENSG00000152700.91220.57030843.728900.532603.663702.37900HepG2AGO1
SAR1BENSG00000152700.91084.61340865.327400.325802.528501.49620HepG2EIF3G
SAR1BENSG00000152700.92377.852001639.440100.5364011.8077010.31430HepG2EIF4G1
SAR1BENSG00000152700.92232.922501570.468200.507605.691404.54600HepG2EIF4G2
SAR1BENSG00000152700.91266.74830920.460600.460603.884302.39740HepG2FKBP4
SAR1BENSG00000152700.91173.48530702.974400.739203.013301.95160HepG2FTO
SAR1BENSG00000152700.91528.129802166.21760-0.503404.823303.92650HepG2FXR1
SAR1BENSG00000152700.91122.84570795.572300.497003.626602.90230HepG2GPKOW
SAR1BENSG00000152700.9969.821901558.98450-0.684805.138603.61600HepG2GRSF1
SAR1BENSG00000152700.91842.356001527.194400.270603.243102.24250HepG2HNRNPA2B1
SAR1BENSG00000152700.91456.642602034.75310-0.482204.957104.04330HepG2HNRNPK
SAR1BENSG00000152700.91582.69120759.226401.0597017.4591016.07180HepG2HNRNPLL
SAR1BENSG00000152700.9518.99720690.06600-0.411002.880401.91050HepG2HNRNPM
SAR1BENSG00000152700.9737.94240937.73580-0.345703.596202.91340HepG2HNRNPU
SAR1BENSG00000152700.91012.223301916.88570-0.921204.547403.29710HepG2IGF2BP3
SAR1BENSG00000152700.91019.793702054.52090-1.0105012.043509.87340HepG2KHSRP
SAR1BENSG00000152700.91254.101101647.75470-0.393804.639903.65240HepG2NOL12
SAR1BENSG00000152700.9909.32150673.176100.433703.211702.40810HepG2NSUN2
SAR1BENSG00000152700.92546.006801539.209300.725904.797703.60400HepG2PABPC1
SAR1BENSG00000152700.9616.58540928.23580-0.590208.513407.15820HepG2PARN
SAR1BENSG00000152700.91745.343801198.247000.542503.414802.26450HepG2PCBP2
SAR1BENSG00000152700.9412.49290540.82070-0.390802.616701.42280HepG2PKM
SAR1BENSG00000152700.91013.71630740.749000.452505.709704.64160HepG2PRPF4
SAR1BENSG00000152700.9557.34060853.25140-0.614404.600003.58680HepG2PRPF8
SAR1BENSG00000152700.91525.314001868.24940-0.292603.505802.90570HepG2PTBP1
SAR1BENSG00000152700.91167.618301669.77220-0.5161011.5819010.54300HepG2PUM1
SAR1BENSG00000152700.91289.056101668.53900-0.372303.972603.17300HepG2PUM2
SAR1BENSG00000152700.91498.296901260.816500.248902.853102.23020HepG2PUS1
SAR1BENSG00000152700.91746.031801156.398200.594303.237002.47760HepG2RAVER1
SAR1BENSG00000152700.91077.031901653.99840-0.6189011.3560010.45890HepG2RBM22
SAR1BENSG00000152700.92669.236101836.263600.539606.176005.20500HepG2RBM25
SAR1BENSG00000152700.91275.383902079.13380-0.7051017.2087016.08210HepG2NELFE
SAR1BENSG00000152700.91465.240301936.51850-0.402306.366505.48630HepG2RECQL
SAR1BENSG00000152700.91801.542301135.822300.665404.744803.52040HepG2RPS10
SAR1BENSG00000152700.9380.93810636.35530-0.740307.538106.58420HepG2RPS19
SAR1BENSG00000152700.91195.05240844.063700.501604.027103.10020HepG2RRP9
SAR1BENSG00000152700.9640.55370835.11310-0.382703.020302.35280HepG2SAFB2
SAR1BENSG00000152700.9578.423901143.47190-0.983203.003601.58150HepG2SF1
SAR1BENSG00000152700.91099.49550751.502600.548905.348604.39030HepG2SF3B1
SAR1BENSG00000152700.9639.93010973.91310-0.6059010.916109.77300HepG2SMN1
SAR1BENSG00000152700.91118.96970836.171800.420202.042201.37520HepG2SNRNP70
SAR1BENSG00000152700.91422.753301868.15300-0.392906.407805.73120HepG2SRFBP1
SAR1BENSG00000152700.92391.943302030.185100.236503.058502.56730HepG2SRSF1
SAR1BENSG00000152700.92991.872401622.038600.8831035.2313033.87940HepG2SSB
SAR1BENSG00000152700.91508.978401080.664900.481602.752101.55270HepG2SUB1
SAR1BENSG00000152700.91455.662001766.25750-0.279003.679502.97980HepG2SUCLG1
SAR1BENSG00000152700.9969.22650675.378400.521005.654304.33340HepG2SUPT6H
SAR1BENSG00000152700.91345.924101100.868100.289901.896601.32280HepG2SUPV3L1
SAR1BENSG00000152700.91222.58320739.925700.724408.937807.73960HepG2TARDBP
SAR1BENSG00000152700.91616.993301169.797400.467008.509507.39550HepG2UPF1
SAR1BENSG00000152700.9960.021901129.39470-0.234402.215201.66610HepG2UTP3
SAR1BENSG00000152700.91690.796601286.554400.394107.485906.69970HepG2ZNF622
SAR1BENSG00000152700.9883.30150637.831200.469603.819602.40500K562AARS
SAR1BENSG00000152700.93163.806001996.986300.663709.623608.63340K562AQR
SAR1BENSG00000152700.93034.978202361.668700.361804.451403.20430K562CELF1
SAR1BENSG00000152700.9689.38910855.89450-0.312102.783101.45680K562DDX27
SAR1BENSG00000152700.91702.475101331.417900.354604.918004.08440K562DDX47
SAR1BENSG00000152700.91796.538401451.846400.307203.378702.39810K562DKC1
SAR1BENSG00000152700.9683.24680876.47750-0.359302.887801.56560K562EWSR1
SAR1BENSG00000152700.9597.82640765.50630-0.356702.612601.38510K562EXOSC5
SAR1BENSG00000152700.91310.627001044.231200.327703.444402.78000K562FXR1
SAR1BENSG00000152700.91573.24380994.349700.661805.522804.44520K562G3BP2
SAR1BENSG00000152700.91602.144001209.991400.404903.154501.82960K562HNRNPK
SAR1BENSG00000152700.91046.61340770.899700.441003.008502.03280K562HNRNPM
SAR1BENSG00000152700.9743.005101225.05980-0.721407.244304.36310K562KHSRP
SAR1BENSG00000152700.92545.442602047.165500.314202.656201.55120K562MSI2
SAR1BENSG00000152700.91474.412501124.266300.391102.195701.43020K562NAA15
SAR1BENSG00000152700.91264.863601002.686500.335002.691801.48120K562NCBP2
SAR1BENSG00000152700.9895.334201044.24010-0.222002.112401.45060K562NSUN2
SAR1BENSG00000152700.91530.375801132.840300.433804.138102.93470K562PCBP2
SAR1BENSG00000152700.91172.17250840.144100.480404.236203.30910K562PRPF8
SAR1BENSG00000152700.92511.175702095.521000.261002.167101.44680K562PUF60
SAR1BENSG00000152700.91243.550501034.149300.265902.176001.41790K562SF3B4
SAR1BENSG00000152700.9726.280901055.64030-0.539508.580507.03320K562SRPK2
SAR1BENSG00000152700.91680.534701212.556900.470805.719504.71000K562SRSF1
SAR1BENSG00000152700.91321.17840964.073500.454503.362502.12990K562U2AF1
SAR1BENSG00000152700.91329.89460995.604300.417604.563303.53750K562U2AF2
SAR1BENSG00000152700.9914.614101107.22870-0.275702.705201.99410K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SAR1B is not available on ENCORE database.





8 RBPs can affect the splicing of SAR1B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESAR1BENSG00000152700.9chr5-133967766133967885133959651133959727133968417133968464-0.560000.000080.00167excludedHepG2U2AF2
SESAR1BENSG00000152700.9chr5-1339677661339678851339596511339597271339684171339684640.159000.000840.07123includedHepG2SRSF7
SESAR1BENSG00000152700.9chr5-133967766133967885133959651133959727133968417133968464-0.413000.000930.04346excludedHepG2SFPQ
SESAR1BENSG00000152700.9chr5-1339677661339678851339596511339597271339684171339684640.130000.000280.01879includedHepG2PTBP1
SESAR1BENSG00000152700.9chr5-1339677661339678851339596511339597271339684171339684640.311000.000160.05292includedK562PPIL4
SESAR1BENSG00000152700.9chr5-133967766133967885133959651133959727133968417133968464-0.165000.000080.02595excludedHepG2FUBP3
SESAR1BENSG00000152700.9chr5-1339677661339678851339596511339597271339684171339684640.363000.000000.00005includedHepG2HNRNPC
SESAR1BENSG00000152700.9chr5-1339677661339678851339596511339597271339684171339684640.502000.000000.00000includedK562HNRNPC
A3SSSAR1BENSG00000152700.9chr5-1339566221339568371339566221339567421339596511339597270.069000.000000.00000longerK562AQR
MXESAR1BENSG00000152700.9chr5-1339483801339484461339566221339567561339452601339453641339596511339597270.052000.000000.000001includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SAR1B is not avaliable on ENCORE database.