RUVBL1

General Information

Gene Name       : RUVBL1
Gene ID             : ENSG00000175792.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: RUVBL1)


Antibody Validation

 View validation images for all RUVBL1 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RUVBL1ENSG00000175792.1168.2367.2467.73ENCSR000AEF
HepG2RUVBL1ENSG00000175792.1165.1856.2060.69ENCSR985KAT
K562RUVBL1ENSG00000175792.11100.8098.9999.89ENCSR000AEO

Assays

3 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq RUVBL1-BGKcLV33-K562RUVBL1K562Released   CRISPRKD% = 0.0,0.0
knockdown followed by RNA-seq RUVBL1-BGKcLV33-K562ENCSR119PLURUVBL1K562ReleasedENCSR271ZAB   CRISPRKD% = 23.9,25.7
knockdown followed by RNA-seq RUVBL1-BGHcLV31-HepG2ENCSR785SZLRUVBL1HepG2ReleasedENCSR452TFV   CRISPRKD% = 54.2,51.7






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
RUVBL1ENCAB336XYMA304-716A1Released, ENCODE4BGHcLV31-19, Released, ENCODE4BGKcLV33-23, Released, ENCODE4
RUVBL1ENCAB639CYHA304-717A1Released, ENCODE4BGHcLV31-19, Released, ENCODE4BGKcLV33-23, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
RUVBL1K562CRISPRBGKcLV33-17,BGKcLV33-18BGKcLV33-1,BGKcLV33-20.0,0.0ReleasedENCODE4
RUVBL1K562CRISPRENCSR119PLUENCSR271ZABRUVBL1-BGKcLV33-23,RUVBL1-BGKcLV33-24NT-BGKcLV33-1,NT-BGKcLV33-223.9,25.7ReleasedENCODE4
RUVBL1HepG2CRISPRENCSR785SZLENCSR452TFVRUVBL1-BGHcLV31-19,RUVBL1-BGHcLV31-20NT-BGHcLV31-1,NT-BGHcLV31-254.2,51.7ReleasedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
RUVBL1Product_ID: A304-716A
Lot_ID: 1
Source: Bethyl Labs
Target Name: RUVBL1-human		 RUVBL1-HEPG2-CRISPR-A304-716A.png<br>Caption: Western blot following CRISPR against RUVBL1 in HepG2 whole cell lysate using RUVBL1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RUVBL1. RUVBL1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
 Bethyl_A304-716A_1_RUVBL1.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RUVBL1 specific antibody, A304-716A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the RUVBL1-specific antibody, A304-716A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 RUVBL1-K562-CRISPR-A304-716A.png<br>Caption: Western blot following CRISPR against RUVBL1 in K562 whole cell lysate using RUVBL1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RUVBL1. RUVBL1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
RUVBL1Product_ID: A304-717A
Lot_ID: 1
Source: Bethyl Labs
Target Name: RUVBL1-human		 Bethyl_A304-717A_1_RUVBL1.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the RUVBL1 specific antibody, A304-717A. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the RUVBL1-specific antibody, A304-717A. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
 RUVBL1-K562-CRISPR-A304-717A.png<br>Caption: Western blot following CRISPR against RUVBL1 in K562 whole cell lysate using RUVBL1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against RUVBL1. RUVBL1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for RUVBL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RUVBL1 RNA is bound by 24 proteins.  







eCLIP assay for RUVBL1 is not avaliable on ENCORE database.





24 proteins are bound to RUVBL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3127799874127799960-3'-UTR,intron-Distal,intron-Proximal4.317104.94898K562NOLC1
chr3127799809127799854-3'-UTR,intron-Distal4.1603912.28970K562TIA1
chr3127799877127799964-3'-UTR,intron-Distal,intron-Proximal6.0267721.14040HepG2SUB1
chr3127799999127800072-3'-UTR,intron-Distal,intron-Proximal4.370449.66332HepG2SUB1
chr3127799886127799940-3'-UTR,intron-Distal,intron-Proximal3.011963.12548K562PABPC4
chr3127799964127800063-3'-UTR,intron-Distal,intron-Proximal3.349125.93417K562PABPC4
chr3127842492127842618-5'-UTR,CDS,intron-Distal4.496764.23295HepG2GRWD1
chr3127842504127842644-5'-UTR,CDS,intron-Distal,intron-Proximal4.6642627.29129K562DDX3X
chr3127842463127842590-5'-UTR,CDS,intron-Distal3.205353.74400HepG2EIF3D
chr3127842459127842623-5'-UTR,CDS,intron-Distal3.062956.46183K562UCHL5
chr3127816149127816180-CDS,intron-Distal3.378499.17533K562YBX3
chr3127823627127823754-CDS,intron-Distal4.225757.48753K562ZNF622
chr3127806576127806637-CDS,intron-Distal4.205589.44646K562YBX3
chr3127819479127819588-CDS,intron-Distal,intron-Proximal3.719725.84565K562ZNF800
chr3127819475127819588-CDS,intron-Distal,intron-Proximal4.258063.11282HepG2G3BP1
chr3127823616127823743-CDS,intron-Distal3.407246.35635K562UCHL5
chr3127823743127823768-CDS,intron-Distal,intron-Proximal4.570804.07072K562UCHL5
chr3127819502127819588-CDS,intron-Distal,intron-Proximal3.625025.76403K562UCHL5
chr3127823615127823769-CDS,intron-Distal,intron-Proximal4.797256.00552HepG2G3BP1
chr3127819478127819590-CDS,intron-Distal,intron-Proximal3.124833.85861K562PUM1
chr3127817739127817789-CDS,intron-Distal,intron-Proximal3.345843.36945K562ZNF622
chr3127819463127819590-CDS,intron-Distal,intron-Proximal3.533763.80299HepG2GRWD1
chr3127819498127819591-CDS,intron-Distal,intron-Proximal4.957785.37137HepG2BCLAF1
chr3127823495127823634-CDS,intron-Distal,intron-Proximal4.733475.35117HepG2PRPF8
chr3127820401127820478-CDS,intron-Distal,intron-Proximal3.404684.00731K562UCHL5
chr3127793974127794016-intron-Distal4.6354322.06336HepG2SMNDC1
chr3127865263127865312-intron-Distal3.924523.51804HepG2HNRNPL
chr3127796110127796179-intron-Distal4.146973.41584HepG2FAM120A
chr3127795654127795753-intron-Distal3.095995.12571HepG2CSTF2T
chr3127793975127794023-intron-Distal5.022994.68352K562NSUN2
chr3127865674127865748-intron-Distal3.786297.69735HepG2HNRNPL
chr3127793973127794015-intron-Distal3.1061710.35233K562SMNDC1
chr3127871652127871741-intron-Distal4.256896.38441HepG2FAM120A
chr3127865161127865215-intron-Distal3.626073.65621HepG2HNRNPL
chr3127865611127865649-intron-Distal3.353946.16156HepG2HNRNPL
chr3127865576127865611-intron-Distal3.287954.78027HepG2HNRNPL
chr3127865112127865161-intron-Distal3.812413.27276HepG2HNRNPL
chr3127793971127794016-intron-Distal8.8325386.66488K562SF3B4
chr3127865545127865576-intron-Distal5.151456.92541HepG2HNRNPL
chr3127865043127865099-intron-Distal5.360478.88633HepG2HNRNPL
chr3127793976127794015-intron-Distal3.3912420.71061HepG2SF3A3
chr3127865532127865545-intron-Distal3.828264.51091HepG2HNRNPL
chr3127793975127794017-intron-Distal6.6969411.58674K562GPKOW
chr3127865519127865584-intron-Distal4.513573.33101HepG2AGGF1
chr3127865672127865760-intron-Distal3.360284.24070HepG2AGGF1
chr3127865649127865666-intron-Distal3.805856.64740HepG2HNRNPL
chr3127796068127796173-intron-Distal4.849767.44133HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RUVBL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RUVBL1 is not available on ENCORE database.

  • 98 RBPs can affect the levels of RUVBL1.  








The Knockdown/knockout RNA-Seq assay for RUVBL1 is not available on ENCORE database.





98 RBPs can affect the gene expression of RUVBL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RUVBL1ENSG00000175792.71037.43690872.165900.250202.381301.81020HepG2ACO1
RUVBL1ENSG00000175792.7555.28770771.78700-0.475003.479802.37360HepG2ADAR
RUVBL1ENSG00000175792.71790.68080958.041200.9022010.641809.66600HepG2AKAP1
RUVBL1ENSG00000175792.7581.62250876.16750-0.591108.371907.12760HepG2AKAP8L
RUVBL1ENSG00000175792.71071.50290792.692100.434703.112602.27950HepG2ASCC1
RUVBL1ENSG00000175792.7988.341301417.73550-0.520503.312402.57210HepG2AUH
RUVBL1ENSG00000175792.7482.41830783.15280-0.699005.420004.20250HepG2BCLAF1
RUVBL1ENSG00000175792.7582.61650803.60360-0.463903.750502.32480HepG2BUD13
RUVBL1ENSG00000175792.7715.177001141.94140-0.675107.253506.18320HepG2CPSF6
RUVBL1ENSG00000175792.71020.888901377.98650-0.432703.628102.79930HepG2DAZAP1
RUVBL1ENSG00000175792.7658.530901296.76010-0.977607.143105.61280HepG2DDX59
RUVBL1ENSG00000175792.7481.41300749.54140-0.638704.440603.21040HepG2DHX30
RUVBL1ENSG00000175792.7634.43670834.39660-0.395303.931303.15150HepG2DKC1
RUVBL1ENSG00000175792.7559.86440777.10260-0.473004.812803.90860HepG2DNAJC21
RUVBL1ENSG00000175792.7298.75980757.84730-1.3429018.1063016.67910HepG2EIF2S1
RUVBL1ENSG00000175792.7453.28190837.49460-0.885708.716707.58640HepG2EIF4A3
RUVBL1ENSG00000175792.71029.671501359.75430-0.401202.908602.05450HepG2EIF4G1
RUVBL1ENSG00000175792.7726.047301302.50630-0.843208.464807.07120HepG2EIF4G2
RUVBL1ENSG00000175792.71200.198901627.95240-0.439802.436301.86570HepG2ETF1
RUVBL1ENSG00000175792.71111.70870852.159300.383503.358302.43860HepG2EWSR1
RUVBL1ENSG00000175792.7707.494401143.91020-0.693202.685901.68430HepG2FTO
RUVBL1ENSG00000175792.71104.58430845.044700.386302.591401.92250HepG2FXR1
RUVBL1ENSG00000175792.7591.05620785.16640-0.409702.981701.92350HepG2GNB2L1
RUVBL1ENSG00000175792.7925.235901294.46430-0.484503.663302.93600HepG2GPKOW
RUVBL1ENSG00000175792.7433.65480784.54870-0.8553010.105108.98600HepG2HNRNPA1
RUVBL1ENSG00000175792.7609.90750872.70300-0.516904.356703.50170HepG2HNRNPC
RUVBL1ENSG00000175792.7846.727601492.92250-0.8182019.5036017.83330HepG2HNRNPF
RUVBL1ENSG00000175792.71013.472001255.13950-0.308502.137101.53460HepG2HNRNPL
RUVBL1ENSG00000175792.7520.450001235.33250-1.2471020.8516019.38000HepG2HNRNPLL
RUVBL1ENSG00000175792.7822.448401470.11060-0.8379015.1259013.57820HepG2IGF2BP1
RUVBL1ENSG00000175792.7734.59460885.53430-0.269601.997401.36250HepG2ILF2
RUVBL1ENSG00000175792.7615.83640797.19710-0.372404.130102.89620HepG2KIF1C
RUVBL1ENSG00000175792.71533.12310850.063400.850709.684908.56280HepG2MATR3
RUVBL1ENSG00000175792.7699.35690876.57260-0.325802.092701.38480HepG2MSI2
RUVBL1ENSG00000175792.7712.099501259.91180-0.823206.553105.02570HepG2MTPAP
RUVBL1ENSG00000175792.7802.886801095.36950-0.448103.673802.81320HepG2NSUN2
RUVBL1ENSG00000175792.7212.44790430.46540-1.018806.065104.71330HepG2PABPC1
RUVBL1ENSG00000175792.7973.02780821.334100.244402.118201.57500HepG2PCBP1
RUVBL1ENSG00000175792.7592.36140773.22610-0.384402.814102.07150HepG2PPIL4
RUVBL1ENSG00000175792.7973.460001383.77700-0.507404.477503.63530HepG2PUM2
RUVBL1ENSG00000175792.7535.28260888.34070-0.7308013.0902011.92170HepG2PUS1
RUVBL1ENSG00000175792.7889.894701100.23370-0.306102.557701.73010HepG2RBM15
RUVBL1ENSG00000175792.7524.70260821.45290-0.646706.843805.82390HepG2RBM25
RUVBL1ENSG00000175792.71197.88610930.108300.364904.266003.62040HepG2NELFE
RUVBL1ENSG00000175792.71005.500301608.12120-0.677508.801607.69130HepG2RPLP0
RUVBL1ENSG00000175792.7865.86670619.541500.482804.166503.42760HepG2RPS19
RUVBL1ENSG00000175792.7481.59240621.67740-0.368402.148901.31730HepG2SERBP1
RUVBL1ENSG00000175792.7931.760101222.72640-0.392103.186102.43080HepG2SF3B1
RUVBL1ENSG00000175792.7824.885001251.00030-0.600804.963004.06580HepG2SLBP
RUVBL1ENSG00000175792.71140.95840900.265800.341703.932703.18840HepG2SMN1
RUVBL1ENSG00000175792.71266.94790908.205500.480207.308106.62470HepG2SRSF1
RUVBL1ENSG00000175792.7764.682801466.71890-0.9397024.7973023.12030HepG2SRSF7
RUVBL1ENSG00000175792.7836.887801334.09010-0.672704.783704.14570HepG2SSB
RUVBL1ENSG00000175792.7974.27220816.417000.254902.009501.51860HepG2TAF15
RUVBL1ENSG00000175792.7690.923301204.10700-0.8014010.476709.19960HepG2TARDBP
RUVBL1ENSG00000175792.7529.70850750.08430-0.501904.641303.56670HepG2TIA1
RUVBL1ENSG00000175792.71175.42690853.086000.462306.308205.46440HepG2UTP3
RUVBL1ENSG00000175792.71140.79820828.925400.460602.561201.54530HepG2XRCC6
RUVBL1ENSG00000175792.7637.05700908.57130-0.512207.406106.39480HepG2ZC3H8
RUVBL1ENSG00000175792.7825.00900971.79620-0.236202.254201.74530HepG2ZNF622
RUVBL1ENSG00000175792.72876.890703631.88020-0.336202.918001.65570K562ABCF1
RUVBL1ENSG00000175792.71383.067803561.46300-1.3646036.3249034.40660K562AQR
RUVBL1ENSG00000175792.71752.673902144.37920-0.291004.244503.03820K562BCLAF1
RUVBL1ENSG00000175792.7961.177102023.03250-1.0736014.8537012.79040K562BOP1
RUVBL1ENSG00000175792.7936.200901213.01960-0.373702.811301.74620K562CCAR1
RUVBL1ENSG00000175792.72708.697803511.73390-0.374602.810401.36840K562CKAP4
RUVBL1ENSG00000175792.72350.865003399.90720-0.532302.928401.82960K562CNOT7
RUVBL1ENSG00000175792.71265.338302151.10070-0.7656011.287309.68820K562CPSF6
RUVBL1ENSG00000175792.74664.902505614.66890-0.267402.894301.89770K562CELF1
RUVBL1ENSG00000175792.72583.208902063.094300.324304.321603.19500K562DKC1
RUVBL1ENSG00000175792.71233.905101890.00980-0.615207.101405.58140K562EFTUD2
RUVBL1ENSG00000175792.71145.812101441.75780-0.331504.037402.55830K562EIF2S1
RUVBL1ENSG00000175792.72013.632602897.29250-0.5249011.074609.78060K562EIF2S2
RUVBL1ENSG00000175792.71389.771302023.77060-0.542204.452603.10290K562EIF3D
RUVBL1ENSG00000175792.7895.220501371.40740-0.615307.623406.26230K562EIF4A3
RUVBL1ENSG00000175792.73321.838404566.72450-0.459209.305007.61950K562EIF4G2
RUVBL1ENSG00000175792.72048.439202611.02710-0.350103.131402.22590K562FIP1L1
RUVBL1ENSG00000175792.71459.784001843.94680-0.337002.335201.31130K562FKBP4
RUVBL1ENSG00000175792.71192.532702188.62290-0.8760014.8790012.81440K562FMR1
RUVBL1ENSG00000175792.71116.789501855.02450-0.732109.122807.36800K562FTO
RUVBL1ENSG00000175792.71966.217801426.196700.463207.425906.49840K562FXR1
RUVBL1ENSG00000175792.71418.753201894.84660-0.417503.275501.70600K562GEMIN5
RUVBL1ENSG00000175792.72250.380902692.28550-0.258702.890601.72540K562GLRX3
RUVBL1ENSG00000175792.71204.747702053.80110-0.769608.976007.53530K562GPKOW
RUVBL1ENSG00000175792.73024.050803860.72170-0.352404.145103.22320K562GRSF1
RUVBL1ENSG00000175792.72070.290702522.17340-0.284802.713601.65120K562HNRNPA1
RUVBL1ENSG00000175792.7784.412402124.24150-1.4373042.1277039.89590K562HNRNPC
RUVBL1ENSG00000175792.71529.883601896.87050-0.310202.648801.53450K562HNRNPF
RUVBL1ENSG00000175792.72388.251502793.18680-0.226002.289401.47510K562HNRNPU
RUVBL1ENSG00000175792.71102.138301753.61310-0.670005.690504.29410K562KRR1
RUVBL1ENSG00000175792.71622.429001947.57540-0.263502.412001.43100K562MAK16
RUVBL1ENSG00000175792.72033.841601644.744700.306202.834701.89980K562MATR3
RUVBL1ENSG00000175792.71400.484202004.72670-0.517506.431105.06840K562METAP2
RUVBL1ENSG00000175792.73107.935704867.74880-0.647309.884307.84440K562MSI2
RUVBL1ENSG00000175792.72148.170402830.57400-0.398008.040406.72860K562MTPAP
RUVBL1ENSG00000175792.71082.995801369.50630-0.338603.260501.91630K562NCBP2
RUVBL1ENSG00000175792.72364.159403145.09560-0.4118012.5149011.08830K562NSUN2
RUVBL1ENSG00000175792.71686.000602550.77350-0.597306.533805.25200K562PCBP3
RUVBL1ENSG00000175792.71407.925101956.54910-0.474706.240805.04270K562POLR2G
RUVBL1ENSG00000175792.71352.011101839.19350-0.444003.921103.03030K562PRPF8
RUVBL1ENSG00000175792.71400.368801904.58280-0.443704.255103.09900K562PSIP1
RUVBL1ENSG00000175792.72069.488701601.310700.369904.042503.25420K562PTBP1
RUVBL1ENSG00000175792.74491.129105299.45720-0.238802.433001.43720K562PUM1
RUVBL1ENSG00000175792.74025.586605192.85520-0.367306.156204.70660K562PUM2
RUVBL1ENSG00000175792.71560.138701901.41070-0.285402.160901.66870K562PUS1
RUVBL1ENSG00000175792.7809.740401163.27470-0.522705.650403.66740K562RBM25
RUVBL1ENSG00000175792.72059.965401615.651900.350402.773001.67910K562NELFE
RUVBL1ENSG00000175792.72276.942303103.29710-0.446706.668805.45110K562SF3A3
RUVBL1ENSG00000175792.71131.081301953.13090-0.788107.284005.65900K562SF3B1
RUVBL1ENSG00000175792.71013.063601275.18220-0.332003.069102.16720K562SF3B4
RUVBL1ENSG00000175792.71033.299001336.07220-0.370702.890201.60070K562SLBP
RUVBL1ENSG00000175792.72685.180503179.38500-0.243704.140803.02000K562SRPK2
RUVBL1ENSG00000175792.71814.751602380.93810-0.391806.278704.50720K562SRSF7
RUVBL1ENSG00000175792.71506.808202529.98130-0.747603.444201.78940K562SUPT6H
RUVBL1ENSG00000175792.71119.207801780.92180-0.670106.981305.31480K562SUPV3L1
RUVBL1ENSG00000175792.71281.243901831.90310-0.515804.850003.58130K562TIAL1
RUVBL1ENSG00000175792.71364.079001946.04060-0.512605.551804.10100K562TRIM56
RUVBL1ENSG00000175792.71200.268401884.79390-0.651007.608405.85050K562UCHL5
RUVBL1ENSG00000175792.72170.438203334.80570-0.6196019.2013017.49950K562UPF1
RUVBL1ENSG00000175792.72355.674902956.74220-0.327902.480901.34850K562UTP3
RUVBL1ENSG00000175792.71879.898502853.49740-0.6021010.048308.34070K562WDR3
RUVBL1ENSG00000175792.73176.499004219.44430-0.409605.226303.45080K562WRN
RUVBL1ENSG00000175792.72578.657604012.22110-0.6378010.501108.69330K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RUVBL1 is not available on ENCORE database.





2 RBPs can affect the splicing of RUVBL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERUVBL1ENSG00000175792.7chr3-127820401127820491127817724127817788127823615127823767-0.099000.001290.02547excludedHepG2U2AF1
SERUVBL1ENSG00000175792.7chr3-127820401127820491127817724127817788127823615127823767-0.283000.000000.00000excludedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RUVBL1 is not avaliable on ENCORE database.