RSBN1

General Information

Gene Name       : RSBN1
Gene ID             : ENSG00000081019.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RSBN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RSBN1ENSG00000081019.137.007.197.10ENCSR000AEF
HepG2RSBN1ENSG00000081019.135.105.995.54ENCSR985KAT
K562RSBN1ENSG00000081019.138.808.468.63ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RSBN1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RSBN1 RNA is bound by 19 proteins.  







eCLIP assay for RSBN1 is not avaliable on ENCORE database.





19 proteins are bound to RSBN1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1114311000114311068-3'-UTR,CDS,intron-Distal,intron-Proximal3.706664.21358HepG2U2AF2
chr1114305600114305659-3'-UTR,intron-Distal4.419094.36811K562FAM120A
chr1114306477114306553-3'-UTR,intron-Distal3.148809.93794K562FAM120A
chr1114304532114304610-3'-UTR,intron-Distal4.190544.33997K562PUM2
chr1114304600114304707-3'-UTR,intron-Distal3.394124.56889HepG2FUBP3
chr1114308568114308657-3'-UTR,CDS,intron-Distal5.1295310.49523K562PUM2
chr1114304610114304716-3'-UTR,intron-Distal3.4345612.15977K562PUM2
chr1114306958114307037-3'-UTR,intron-Distal3.481395.89529K562PUM2
chr1114320359114320442-3'-UTR,CDS,intron-Distal,intron-Proximal4.345573.56057K562U2AF2
chr1114310985114311059-3'-UTR,CDS,intron-Distal,intron-Proximal4.106684.89971K562U2AF2
chr1114306630114306686-3'-UTR,intron-Distal3.059233.85107K562UPF1
chr1114340550114340598-CDS,intron-Distal4.130113.38968HepG2BCLAF1
chr1114354837114354905-CDS,intron-Distal4.323823.91454K562PUM1
chr1114340027114340072-CDS,intron-Distal3.419183.04831K562RBM15
chr1114354290114354336-CDS,intron-Distal4.027315.63763K562AQR
chr1114354804114354885-CDS,intron-Distal5.5425110.28526K562UCHL5
chr1114340477114340550-CDS,intron-Distal5.455878.07539HepG2BCLAF1
chr1114354812114354902-CDS,intron-Distal3.9783711.39909K562ZNF622
chr1114340148114340210-CDS,intron-Distal4.284143.81597K562RBM15
chr1114340465114340547-CDS,intron-Distal3.179783.08145HepG2HLTF
chr1114340435114340546-CDS,intron-Distal3.249447.92329K562UCHL5
chr1114340314114340413-CDS,intron-Distal3.916555.35703HepG2BCLAF1
chr1114340426114340529-CDS,intron-Distal3.9054411.90424K562ZNF622
chr1114354330114354402-CDS,intron-Distal3.568366.74842K562ZNF622
chr1114354822114354908-CDS,intron-Distal4.671756.66103HepG2NCBP2
chr1114340546114340616-CDS,intron-Distal3.492748.11704K562UCHL5
chr1114312533114312583-intron-Distal4.173694.28663HepG2SUGP2
chr1114313234114313294-intron-Distal4.120923.29248HepG2SUGP2
chr1114312534114312599-intron-Distal4.229533.51329HepG2MATR3
chr1114312982114313060-intron-Distal5.222399.21000K562HNRNPM
chr1114313718114313762-intron-Distal3.459254.36087HepG2MATR3
chr1114312886114312971-intron-Distal4.354304.75674K562MATR3
chr1114339769114339857-intron-Distal6.1283317.04904K562FMR1
chr1114313337114313399-intron-Distal3.992007.71515HepG2SUGP2
chr1114312916114312954-intron-Distal3.922023.04224HepG2SUGP2
chr1114313204114313303-intron-Distal4.391234.51309K562HNRNPM
chr1114313349114313401-intron-Distal4.536803.72005K562MATR3
chr1114313353114313401-intron-Distal4.674445.70028HepG2MATR3
chr1114312343114312401-intron-Distal4.101884.28571K562HNRNPM
chr1114339766114339862-intron-Distal3.498546.42740K562CSTF2T
chr1114353424114353527-intron-Distal3.086203.48890K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RSBN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RSBN1 is not available on ENCORE database.

  • 103 RBPs can affect the levels of RSBN1.  








The Knockdown/knockout RNA-Seq assay for RSBN1 is not available on ENCORE database.





103 RBPs can affect the gene expression of RSBN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RSBN1ENSG00000081019.9503.00470779.45800-0.631904.386203.73750HepG2AKAP1
RSBN1ENSG00000081019.9458.90080644.94260-0.491003.132402.29650HepG2ASCC1
RSBN1ENSG00000081019.9821.91650628.568200.386803.683802.91220HepG2AUH
RSBN1ENSG00000081019.9261.90590418.49260-0.676202.550501.65310HepG2BCCIP
RSBN1ENSG00000081019.9388.75880538.25220-0.469404.482803.67490HepG2CKAP4
RSBN1ENSG00000081019.9327.33340497.92190-0.605206.764105.54860HepG2DDX19B
RSBN1ENSG00000081019.9249.11110457.42910-0.876807.964006.87410HepG2DDX21
RSBN1ENSG00000081019.9416.60630563.29420-0.435202.706801.70480HepG2DDX5
RSBN1ENSG00000081019.9368.72090487.76660-0.403702.372301.46490HepG2DHX30
RSBN1ENSG00000081019.9369.93530515.08480-0.477503.850403.07640HepG2DKC1
RSBN1ENSG00000081019.9333.27130505.71740-0.601605.555204.58830HepG2DNAJC21
RSBN1ENSG00000081019.9263.22570501.26240-0.9293013.6120012.27690HepG2DNAJC2
RSBN1ENSG00000081019.9256.31350460.97480-0.846806.257804.92340HepG2EEF2
RSBN1ENSG00000081019.9249.03830384.32330-0.626003.786102.48110HepG2EFTUD2
RSBN1ENSG00000081019.9394.99340616.60390-0.642504.767904.00120HepG2EIF2S1
RSBN1ENSG00000081019.9301.04980452.27880-0.587204.449502.97880HepG2EIF2S2
RSBN1ENSG00000081019.9242.67620374.22810-0.624903.235502.26340HepG2EIF3D
RSBN1ENSG00000081019.9389.03100681.43550-0.808706.648205.65550HepG2EIF4A3
RSBN1ENSG00000081019.9402.59840526.08440-0.386002.412901.63490HepG2EWSR1
RSBN1ENSG00000081019.9327.07280435.94320-0.414502.368701.30690HepG2FASTKD2
RSBN1ENSG00000081019.9438.36140614.05010-0.486202.433501.38310HepG2FUS
RSBN1ENSG00000081019.9406.06540687.49230-0.759606.703705.65540HepG2FXR1
RSBN1ENSG00000081019.9463.85020637.77500-0.459402.720502.06010HepG2G3BP1
RSBN1ENSG00000081019.9417.96800677.04720-0.695905.841404.53770HepG2G3BP2
RSBN1ENSG00000081019.9235.57700333.20750-0.500202.582101.72170HepG2GEMIN5
RSBN1ENSG00000081019.9310.30250448.58770-0.531702.815702.17000HepG2GPKOW
RSBN1ENSG00000081019.9343.63030489.44220-0.510302.366601.33670HepG2GRSF1
RSBN1ENSG00000081019.9169.76510510.56240-1.5885021.6512020.13610HepG2HNRNPA1
RSBN1ENSG00000081019.9503.38220628.97650-0.321402.447001.56010HepG2HNRNPA2B1
RSBN1ENSG00000081019.9280.77460567.90990-1.0162010.724509.43660HepG2HNRNPC
RSBN1ENSG00000081019.9417.33650645.74650-0.629804.977904.06170HepG2HNRNPK
RSBN1ENSG00000081019.9447.36410623.51320-0.479005.330304.42090HepG2HNRNPL
RSBN1ENSG00000081019.9344.69530564.15490-0.710808.729707.69980HepG2HNRNPU
RSBN1ENSG00000081019.9289.60960648.29320-1.1625013.5269012.16010HepG2IGF2BP2
RSBN1ENSG00000081019.9276.78700576.26500-1.0580019.9530018.19510HepG2ILF2
RSBN1ENSG00000081019.9339.74450503.83170-0.568503.266001.94740HepG2KHDRBS1
RSBN1ENSG00000081019.9475.38170652.05550-0.455902.211601.32790HepG2KHSRP
RSBN1ENSG00000081019.9384.44080492.14170-0.356302.719001.70650HepG2KIF1C
RSBN1ENSG00000081019.9402.99520596.40800-0.565503.001501.70230HepG2KRR1
RSBN1ENSG00000081019.9524.67300862.41100-0.717005.550704.36060HepG2LARP4
RSBN1ENSG00000081019.9287.15090450.15880-0.648602.531001.44750HepG2LARP7
RSBN1ENSG00000081019.9364.85610687.73210-0.914508.913707.74950HepG2MAGOH
RSBN1ENSG00000081019.9361.57980691.58900-0.935608.519507.46270HepG2MATR3
RSBN1ENSG00000081019.9247.64590391.67710-0.661402.732501.68740HepG2METAP2
RSBN1ENSG00000081019.9286.29110487.21100-0.767106.992005.76370HepG2MSI2
RSBN1ENSG00000081019.9518.54980678.69250-0.388302.079401.41590HepG2NOL12
RSBN1ENSG00000081019.9156.63310279.78950-0.837003.853101.96330HepG2PA2G4
RSBN1ENSG00000081019.9304.52540558.41230-0.8748011.6579010.11260HepG2PARN
RSBN1ENSG00000081019.9383.94010581.30920-0.598403.267702.14240HepG2PCBP2
RSBN1ENSG00000081019.9380.84470579.68140-0.606103.822801.72590HepG2PPIG
RSBN1ENSG00000081019.9357.74900503.18050-0.492104.039403.16620HepG2PPIL4
RSBN1ENSG00000081019.9438.55380642.37960-0.550705.675904.94850HepG2PTBP1
RSBN1ENSG00000081019.9390.36710647.84160-0.730807.583406.66080HepG2PUF60
RSBN1ENSG00000081019.9411.49140687.67770-0.7409012.3127011.25080HepG2PUM1
RSBN1ENSG00000081019.9473.12600687.19700-0.538505.243104.33390HepG2PUM2
RSBN1ENSG00000081019.9277.60130548.37810-0.9822015.0725013.83710HepG2PUS1
RSBN1ENSG00000081019.9892.59200631.374800.499404.783303.91890HepG2RBM25
RSBN1ENSG00000081019.9482.92650714.88510-0.565906.009005.26240HepG2NELFE
RSBN1ENSG00000081019.9252.63750377.30800-0.578703.510302.75590HepG2RPLP0
RSBN1ENSG00000081019.9166.82780364.12300-1.1261010.595409.48770HepG2RPS19
RSBN1ENSG00000081019.9329.28480500.64730-0.604502.112201.40770HepG2RPS2
RSBN1ENSG00000081019.9340.63920530.94900-0.640303.747102.81600HepG2RPS3A
RSBN1ENSG00000081019.9379.39520502.40280-0.405103.203002.51990HepG2SAFB2
RSBN1ENSG00000081019.9255.18000365.48160-0.518302.640401.72310HepG2SERBP1
RSBN1ENSG00000081019.9436.71770668.75330-0.614806.773405.91280HepG2SF3B4
RSBN1ENSG00000081019.9367.96030585.88310-0.671108.718607.67800HepG2SMN1
RSBN1ENSG00000081019.9381.77520571.71470-0.582603.385202.31320HepG2SMNDC1
RSBN1ENSG00000081019.9933.41280681.258700.454205.719705.07200HepG2SRFBP1
RSBN1ENSG00000081019.9532.54860698.05280-0.390402.876502.39690HepG2SRSF1
RSBN1ENSG00000081019.9456.37040639.60750-0.487005.059504.25300HepG2SRSF5
RSBN1ENSG00000081019.9444.62370591.53850-0.411902.073401.61320HepG2SSB
RSBN1ENSG00000081019.9549.73410727.44570-0.404103.571302.88150HepG2SUCLG1
RSBN1ENSG00000081019.9421.76620602.10040-0.513602.710301.39930HepG2SUGP2
RSBN1ENSG00000081019.9264.83690409.62280-0.629202.753402.07820HepG2SUPV3L1
RSBN1ENSG00000081019.9260.67560417.24870-0.678704.557203.65730HepG2TARDBP
RSBN1ENSG00000081019.9226.75000548.16860-1.2735019.1760018.07710HepG2TIAL1
RSBN1ENSG00000081019.9239.82730553.08310-1.2055021.0682019.69560HepG2TRIM56
RSBN1ENSG00000081019.9497.43250632.85690-0.347402.326401.53160HepG2TUFM
RSBN1ENSG00000081019.9715.82350515.018500.474902.958802.31050HepG2U2AF1
RSBN1ENSG00000081019.9158.50800242.00600-0.610502.541301.81450HepG2UCHL5
RSBN1ENSG00000081019.9273.36980573.02810-1.0678017.3873015.93180HepG2UPF1
RSBN1ENSG00000081019.9421.57150553.23900-0.392103.098602.47080HepG2UTP3
RSBN1ENSG00000081019.9227.76760403.22750-0.824004.784703.84020HepG2XRN2
RSBN1ENSG00000081019.9397.49880630.22390-0.664909.277108.42640HepG2ZNF622
RSBN1ENSG00000081019.91487.828501109.191100.423606.440505.62700K562AGGF1
RSBN1ENSG00000081019.91482.966601154.172300.361503.204402.50100K562AKAP8L
RSBN1ENSG00000081019.92871.951701457.538500.9784019.5444018.15350K562AQR
RSBN1ENSG00000081019.9795.86510974.72970-0.292502.136901.43890K562CPSF6
RSBN1ENSG00000081019.9692.26380903.92810-0.384903.133002.01810K562DDX3X
RSBN1ENSG00000081019.91357.437101572.09920-0.211802.013601.44210K562DDX47
RSBN1ENSG00000081019.9714.32860916.47170-0.359503.289501.83350K562DDX6
RSBN1ENSG00000081019.91453.969301241.917700.227302.120401.36500K562DKC1
RSBN1ENSG00000081019.9768.95100992.92200-0.368803.847302.39900K562EIF2S1
RSBN1ENSG00000081019.9297.24760444.27000-0.579802.364601.44130K562EIF3A
RSBN1ENSG00000081019.9559.16460842.79660-0.591906.982405.72780K562EIF3G
RSBN1ENSG00000081019.9931.46190745.103200.322002.686101.36840K562FUS
RSBN1ENSG00000081019.9687.32080982.13310-0.514906.344505.48360K562FXR1
RSBN1ENSG00000081019.91342.561401039.023500.369702.035701.44180K562G3BP2
RSBN1ENSG00000081019.9856.983901285.60900-0.585107.028505.81550K562GRSF1
RSBN1ENSG00000081019.9507.16500786.93220-0.633806.321005.45430K562HNRNPC
RSBN1ENSG00000081019.9566.02760825.74810-0.544803.940702.81610K562HNRNPM
RSBN1ENSG00000081019.91047.970501361.10700-0.377203.049902.21580K562HSPD1
RSBN1ENSG00000081019.9782.674801233.30220-0.656005.715804.01520K562IGF2BP2
RSBN1ENSG00000081019.91589.809801224.834900.376203.299802.39110K562KIF1C
RSBN1ENSG00000081019.91022.568101296.20450-0.342102.922902.05840K562MAGOH
RSBN1ENSG00000081019.91068.504701293.58290-0.275802.122501.32390K562MATR3
RSBN1ENSG00000081019.91792.684701372.128700.385604.115802.97230K562MBNL1
RSBN1ENSG00000081019.9920.797401080.97850-0.231402.009901.31520K562MTPAP
RSBN1ENSG00000081019.91349.36170961.765500.488402.963602.04600K562NAA15
RSBN1ENSG00000081019.9870.457301139.66110-0.388803.019902.15820K562PPIG
RSBN1ENSG00000081019.9504.52890705.56320-0.483803.190802.20910K562PSIP1
RSBN1ENSG00000081019.9686.771801259.34000-0.8748015.6999014.18490K562PTBP1
RSBN1ENSG00000081019.91856.629901144.560300.697809.012508.08130K562PUS1
RSBN1ENSG00000081019.91504.361101115.252900.431705.621004.80120K562RBM15
RSBN1ENSG00000081019.9496.28850723.74650-0.544303.547302.62010K562RPS19
RSBN1ENSG00000081019.9510.39570661.50350-0.374102.434901.42420K562SAFB
RSBN1ENSG00000081019.9873.074301165.94110-0.417303.531502.31920K562SRSF5
RSBN1ENSG00000081019.9780.324601249.47520-0.679207.810806.54620K562TARDBP
RSBN1ENSG00000081019.9862.500601205.25660-0.482705.377904.17990K562TIA1
RSBN1ENSG00000081019.9506.80410678.63610-0.421202.478001.59740K562TIAL1
RSBN1ENSG00000081019.9529.15030720.94180-0.446203.208302.17330K562TRIM56
RSBN1ENSG00000081019.9938.937201325.58430-0.497503.559901.40580K562TUFM
RSBN1ENSG00000081019.9986.328401273.52360-0.368704.864003.94060K562UPF1
RSBN1ENSG00000081019.9951.184101133.16860-0.252602.597901.77570K562WDR43
RSBN1ENSG00000081019.9549.61070741.37440-0.431802.806501.59070K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RSBN1 is not available on ENCORE database.





2 RBPs can affect the splicing of RSBN1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERSBN1ENSG00000081019.9chr1-1143388071143389251143202921143204301143399841143406580.376000.000850.01683includedK562HNRNPC
A3SSRSBN1ENSG00000081019.9chr1-1143202921143204711143202921143204301143399841143406580.255000.000000.00005longerK562AQR
A3SSRSBN1ENSG00000081019.9chr1-1143097201143099181143097201143098291143108431143110110.111000.001260.00858longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RSBN1 is not avaliable on ENCORE database.