PIK3CD

General Information

Gene Name       : PIK3CD
Gene ID             : ENSG00000171608.15
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PIK3CD)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PIK3CDENSG00000171608.1513.9126.8920.40ENCSR000AEF
HepG2PIK3CDENSG00000171608.157.474.576.02ENCSR985KAT
K562PIK3CDENSG00000171608.159.016.427.71ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PIK3CD is not avaliable on ENCORE database.



Proteins bound to RNA
  • PIK3CD RNA is bound by 11 proteins.  







eCLIP assay for PIK3CD is not avaliable on ENCORE database.





11 proteins are bound to PIK3CD RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr197886089788716+3'-UTR3.151934.63292HepG2PABPN1
chr197888599788915+3'-UTR3.410413.06830K562UPF1
chr197816919781827+3'-UTR,CDS,intron-Proximal4.7907313.57543HepG2SF3B4
chr197878839787934+3'-UTR4.701306.41561K562TIA1
chr197817739781838+3'-UTR,CDS,intron-Proximal6.0781613.04469K562SF3B4
chr197802739780344+CDS,intron-Proximal4.066315.97994K562AQR
chr197814999781557+CDS,intron-Proximal4.758645.52963HepG2PPIG
chr197766649776721+CDS,intron-Proximal3.238344.48980K562PRPF8
chr197839839784062+CDS,intron-Proximal3.591627.16774K562AQR
chr197826629782681+CDS,intron-Proximal4.396559.29543K562AQR
chr197849099784978+CDS3.745823.19539K562YBX3
chr197831729783224+CDS,intron-Proximal4.233433.96990K562BUD13
chr197801649780208+CDS,intron-Proximal4.480813.96990K562BUD13
chr197840009784070+CDS,intron-Proximal3.399726.38100K562BUD13
chr197847969784868+CDS,intron-Proximal5.170015.40008K562SF3B4
chr197799789780075+CDS,intron-Proximal3.255103.90681K562DDX24
chr197800349780077+CDS,intron-Proximal4.909237.25958HepG2PPIG
chr197801679780195+CDS,intron-Proximal3.478934.13746HepG2PPIG
chr197779709778056+intron-Distal3.936163.38470HepG2NKRF
chr197833509783436+intron-Proximal5.860599.95272K562AQR
chr197789739779017+intron-Proximal4.585048.69247K562AQR
chr197819349782033+intron-Proximal3.804703.39008HepG2AQR
chr197766779776719+intron-Proximal5.4423415.34985K562AQR
chr197819659782029+intron-Proximal4.895794.65563K562AQR
chr197826819782751+intron-Proximal6.6045917.53326K562AQR
chr197819369782030+intron-Proximal4.910255.29191K562BUD13
chr197847879784859+intron-Proximal4.663465.80027HepG2SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PIK3CD is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PIK3CD is not available on ENCORE database.

  • 87 RBPs can affect the levels of PIK3CD.  








The Knockdown/knockout RNA-Seq assay for PIK3CD is not available on ENCORE database.





87 RBPs can affect the gene expression of PIK3CD :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PIK3CDENSG00000171608.11502.53670758.10630-0.593203.667502.58790HepG2ABCF1
PIK3CDENSG00000171608.11570.60370682.61830-0.258601.954801.42730HepG2ACO1
PIK3CDENSG00000171608.11779.419001151.15510-0.562602.373901.87670HepG2AKAP1
PIK3CDENSG00000171608.11572.20580429.692200.413102.516901.94310HepG2BOP1
PIK3CDENSG00000171608.11554.54650780.47730-0.493002.800201.81860HepG2CCAR1
PIK3CDENSG00000171608.11585.61770904.86980-0.627802.937802.14130HepG2CIRBP
PIK3CDENSG00000171608.11852.06300700.766800.281902.401501.79500HepG2CELF1
PIK3CDENSG00000171608.111043.68560753.417700.470107.501506.36710HepG2DAZAP1
PIK3CDENSG00000171608.11611.60350405.582900.592504.545803.30380HepG2DHX30
PIK3CDENSG00000171608.11474.93380653.08300-0.459504.316603.50650HepG2DKC1
PIK3CDENSG00000171608.11542.03050420.494200.366202.631201.94160HepG2DNAJC21
PIK3CDENSG00000171608.11570.43750416.851800.452404.462403.66960HepG2DNAJC2
PIK3CDENSG00000171608.11637.56900979.83550-0.620002.694202.01420HepG2EIF4B
PIK3CDENSG00000171608.11508.32890656.54260-0.369102.468301.43710HepG2ESF1
PIK3CDENSG00000171608.11680.60330941.77840-0.468601.958701.39470HepG2G3BP1
PIK3CDENSG00000171608.11270.94030434.21130-0.680404.741503.56810HepG2GEMIN5
PIK3CDENSG00000171608.11606.42800447.156200.439502.392301.79330HepG2GPKOW
PIK3CDENSG00000171608.11702.03160582.442800.269302.236201.58700HepG2HNRNPF
PIK3CDENSG00000171608.11407.57840527.97550-0.373402.513701.60490HepG2HNRNPM
PIK3CDENSG00000171608.11695.35860573.545600.277701.955901.33870HepG2IGF2BP1
PIK3CDENSG00000171608.11832.94540624.004200.416605.122403.74350HepG2KIF1C
PIK3CDENSG00000171608.11714.214401015.96140-0.508401.961101.40460HepG2MAGOH
PIK3CDENSG00000171608.11466.39660619.26340-0.409003.046702.19810HepG2MSI2
PIK3CDENSG00000171608.11602.50050388.395500.633302.470301.44180HepG2NONO
PIK3CDENSG00000171608.111274.27340762.495900.740804.585703.42320HepG2PABPC1
PIK3CDENSG00000171608.111299.30480930.705800.481203.565902.75220HepG2PABPC4
PIK3CDENSG00000171608.11705.93240418.398800.754608.553307.30490HepG2PPIL4
PIK3CDENSG00000171608.11365.61690579.97470-0.665707.619206.41350HepG2PRPF4
PIK3CDENSG00000171608.11324.35300554.57650-0.773804.574303.03450HepG2PRPF6
PIK3CDENSG00000171608.111384.75210961.299800.526508.036507.26120HepG2RBM22
PIK3CDENSG00000171608.11467.847101000.77870-1.0970011.6197010.65850HepG2NELFE
PIK3CDENSG00000171608.11374.64780474.56390-0.341101.895701.37850HepG2RPS19
PIK3CDENSG00000171608.11610.69590417.743600.547706.156205.25360HepG2SAFB2
PIK3CDENSG00000171608.11470.74860742.19510-0.656804.308003.45660HepG2SF3A3
PIK3CDENSG00000171608.11810.61050422.371400.9404011.5212010.17450HepG2SF3B1
PIK3CDENSG00000171608.11929.43980683.886800.442506.154405.17400HepG2SLBP
PIK3CDENSG00000171608.11586.93430977.19890-0.735506.598605.94400HepG2SRSF1
PIK3CDENSG00000171608.11811.22660572.211000.503506.539405.54260HepG2SRSF7
PIK3CDENSG00000171608.111149.05960795.056800.531205.895305.14430HepG2SRSF9
PIK3CDENSG00000171608.11627.78060942.71580-0.586608.711007.90100HepG2SSB
PIK3CDENSG00000171608.11607.05010878.51680-0.533303.621902.99590HepG2TAF15
PIK3CDENSG00000171608.11448.147401003.91820-1.163607.450705.80000HepG2TBRG4
PIK3CDENSG00000171608.11669.26860455.733700.554305.299704.65360HepG2TIAL1
PIK3CDENSG00000171608.11668.91580459.902100.540405.610904.85990HepG2TRIM56
PIK3CDENSG00000171608.111091.10470737.573300.564803.346102.42690HepG2UBE2L3
PIK3CDENSG00000171608.11420.70950248.660800.758505.392504.32850HepG2UCHL5
PIK3CDENSG00000171608.11362.26060635.47880-0.8108011.1865010.11190HepG2UTP3
PIK3CDENSG00000171608.11373.06520572.35290-0.617507.118306.12140HepG2ZC3H8
PIK3CDENSG00000171608.111093.70480723.908600.5952011.5717010.64310HepG2ZNF622
PIK3CDENSG00000171608.11412.62660619.55510-0.586404.249102.75090K562AARS
PIK3CDENSG00000171608.111248.00430991.146500.332403.259202.65260K562AGGF1
PIK3CDENSG00000171608.11738.768801090.55220-0.561905.838503.92990K562APOBEC3C
PIK3CDENSG00000171608.11672.36470903.53780-0.426302.406101.85270K562AQR
PIK3CDENSG00000171608.11780.59220611.654400.351803.196102.16560K562BCLAF1
PIK3CDENSG00000171608.11428.08850309.560000.467602.447601.63140K562BOP1
PIK3CDENSG00000171608.11506.93660694.06650-0.453302.676801.42020K562CIRBP
PIK3CDENSG00000171608.11485.95750329.137600.562004.198703.23040K562CPSF6
PIK3CDENSG00000171608.11692.03250464.031000.576505.650104.06130K562CSTF2
PIK3CDENSG00000171608.111025.39300834.831200.296502.616601.44170K562DDX21
PIK3CDENSG00000171608.111084.96970862.754100.330502.727201.69240K562DDX3X
PIK3CDENSG00000171608.11658.17630908.97360-0.465804.025003.25850K562DDX47
PIK3CDENSG00000171608.11878.40500662.263600.407404.111003.26010K562EIF2S2
PIK3CDENSG00000171608.11279.30760433.48000-0.634102.719901.72520K562EIF3A
PIK3CDENSG00000171608.11868.06380606.730200.516605.198103.41560K562EXOSC5
PIK3CDENSG00000171608.11373.20310588.81910-0.657905.004203.41030K562FKBP4
PIK3CDENSG00000171608.11537.99450334.915800.683705.382904.18380K562FMR1
PIK3CDENSG00000171608.11419.56290283.882700.563503.369102.35290K562FTO
PIK3CDENSG00000171608.11547.32840937.39210-0.7762012.6199011.42390K562FXR1
PIK3CDENSG00000171608.11195.26990417.05400-1.094808.512007.12790K562G3BP2
PIK3CDENSG00000171608.11492.06260314.234600.646904.898703.84510K562GPKOW
PIK3CDENSG00000171608.11546.79990677.52930-0.309301.882301.37830K562HNRNPC
PIK3CDENSG00000171608.11472.42250646.69770-0.453002.752201.52140K562HNRNPK
PIK3CDENSG00000171608.111180.15230873.298000.434306.115205.06630K562NSUN2
PIK3CDENSG00000171608.11579.24420771.75920-0.414002.445501.66530K562PCBP3
PIK3CDENSG00000171608.11411.47630591.97460-0.524704.290303.28860K562POLR2G
PIK3CDENSG00000171608.11323.49310526.74790-0.703402.992902.21310K562PRPF8
PIK3CDENSG00000171608.111137.823401434.53800-0.334303.347302.16980K562PUM1
PIK3CDENSG00000171608.111703.311401405.354900.277302.560001.63450K562PUM2
PIK3CDENSG00000171608.11391.99600554.51590-0.500403.070102.01930K562RCC2
PIK3CDENSG00000171608.11511.27500667.11110-0.383802.369401.37410K562NELFE
PIK3CDENSG00000171608.11305.84740536.38230-0.810404.014903.02720K562RPS19
PIK3CDENSG00000171608.11394.96590527.43550-0.417302.379201.37950K562SAFB
PIK3CDENSG00000171608.11399.65030545.31970-0.448402.878001.40220K562SDAD1
PIK3CDENSG00000171608.11481.64760648.31550-0.428702.457101.78410K562SRSF1
PIK3CDENSG00000171608.11790.95750612.387600.369102.518201.52400K562SRSF5
PIK3CDENSG00000171608.11928.70740745.011500.317902.812101.63510K562SRSF7
PIK3CDENSG00000171608.11432.23530593.75360-0.458003.500202.57730K562SYNCRIP
PIK3CDENSG00000171608.11843.18680632.856200.413903.435902.50890K562TIA1
PIK3CDENSG00000171608.11818.46050584.308300.486103.380202.34110K562TIAL1
PIK3CDENSG00000171608.11876.20800621.231300.496003.975902.62970K562TRA2A
PIK3CDENSG00000171608.11796.43740621.007900.358802.404601.53240K562TRIM56
PIK3CDENSG00000171608.11675.32610459.790100.554504.065002.29360K562TRIP6
PIK3CDENSG00000171608.11372.54270561.08020-0.590803.262901.33130K562TRNAU1AP
PIK3CDENSG00000171608.11228.41490404.04360-0.822905.753004.05790K562U2AF1
PIK3CDENSG00000171608.11176.60520417.36020-1.2408015.0769013.17870K562U2AF2
PIK3CDENSG00000171608.11820.30990539.609000.604204.793203.41320K562UCHL5
PIK3CDENSG00000171608.11995.72390792.322400.329602.629701.77400K562WDR3
PIK3CDENSG00000171608.111254.234501017.670100.301402.164001.41150K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PIK3CD is not available on ENCORE database.





5 RBPs can affect the splicing of PIK3CD :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPIK3CDENSG00000171608.11chr1+9770162977033897515249751629977048197706540.307000.001400.03612includedK562AGGF1
RIPIK3CDENSG00000171608.11chr1+9781501978191897815019781645978181897819180.396000.000260.00223includedK562PUS1
RIPIK3CDENSG00000171608.11chr1+9781501978191897815019781645978181897819180.201000.003180.04755includedHepG2G3BP1
RIPIK3CDENSG00000171608.11chr1+9781501978191897815019781645978181897819180.182000.005430.04796includedHepG2RBM22
RIPIK3CDENSG00000171608.11chr1+9781501978191897815019781645978181897819180.149000.016050.08114includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PIK3CD is not avaliable on ENCORE database.