PDDC1

General Information

Gene Name       : PDDC1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PDDC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PDDC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PDDC1 RNA is bound by 31 proteins.  







eCLIP assay for PDDC1 is not avaliable on ENCORE database.





31 proteins are bound to PDDC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11767587767634-3'-UTR,intron-Distal5.083674.65802K562DROSHA
chr11767403767532-3'-UTR,intron-Distal4.6238919.81468HepG2LSM11
chr11767395767476-3'-UTR,intron-Distal5.1363921.82287K562UPF1
chr11772476772598-3'-UTR,CDS,intron-Distal,intron-Proximal3.710315.99700HepG2AQR
chr11770433770487-3'-UTR,intron-Distal,intron-Proximal4.9623324.58482HepG2AKAP1
chr11767580767652-3'-UTR,intron-Distal3.1234212.74899K562ILF3
chr11770549770613-3'-UTR,intron-Distal,intron-Proximal3.554194.54058K562LSM11
chr11770437770490-3'-UTR,intron-Distal,intron-Proximal5.2078318.61796HepG2UPF1
chr11770854770896-3'-UTR,intron-Distal,intron-Proximal5.5340612.38649HepG2AKAP1
chr11770439770539-3'-UTR,intron-Distal,intron-Proximal3.279334.65608K562DHX30
chr11770448770506-3'-UTR,intron-Distal,intron-Proximal3.207446.40673HepG2DDX59
chr11771350771413-3'-UTR,CDS,intron-Distal,intron-Proximal3.676484.19763K562DDX24
chr11770766770834-3'-UTR,intron-Distal,intron-Proximal4.3790420.16098HepG2UPF1
chr11773460773530-3'-UTR,CDS,intron-Distal,intron-Proximal3.646425.29272K562BUD13
chr11769165769222-3'-UTR,intron-Distal3.5279916.27793K562UPF1
chr11770162770248-3'-UTR,intron-Distal,intron-Proximal5.3881236.91275K562UPF1
chr11770424770490-3'-UTR,intron-Distal,intron-Proximal3.8149318.01701K562AKAP1
chr11767577767640-3'-UTR,intron-Distal3.6013119.76205K562UPF1
chr11767480767514-3'-UTR,intron-Distal3.552324.51064HepG2AKAP1
chr11770756770806-3'-UTR,intron-Distal,intron-Proximal3.312964.34473HepG2STAU2
chr11770151770229-3'-UTR,intron-Distal,intron-Proximal4.061684.70114K562FUS
chr11767762767808-3'-UTR,intron-Distal4.9914021.42629K562UPF1
chr11773476773541-3'-UTR,CDS,intron-Distal,intron-Proximal3.287817.16988HepG2PPIG
chr11770640770689-3'-UTR,intron-Distal,intron-Proximal5.6007513.43839HepG2AKAP1
chr11770118770162-3'-UTR,intron-Distal,intron-Proximal4.8138423.54497K562UPF1
chr11769964770047-3'-UTR,intron-Distal4.5222826.66720K562AKAP1
chr11767397767455-3'-UTR,intron-Distal4.367474.28193HepG2AQR
chr11772464772522-3'-UTR,CDS,intron-Distal,intron-Proximal3.3468812.87034HepG2PPIG
chr11770118770173-3'-UTR,intron-Distal,intron-Proximal4.3289613.47586HepG2UPF1
chr11770896770898-3'-UTR,intron-Distal,intron-Proximal4.308483.28061K562DDX55
chr11770636770703-3'-UTR,intron-Distal,intron-Proximal4.6941423.20207K562UPF1
chr11770485770522-3'-UTR,intron-Distal,intron-Proximal3.980744.66021K562GEMIN5
chr11770700770725-3'-UTR,intron-Distal,intron-Proximal4.372678.41723K562AKAP1
chr11767772767851-3'-UTR,intron-Distal3.8999023.90812K562AKAP1
chr11769060769105-3'-UTR,intron-Distal3.324588.32978K562ILF3
chr11770194770246-3'-UTR,intron-Distal,intron-Proximal4.342405.01664HepG2STAU2
chr11769239769306-3'-UTR,intron-Distal3.7308424.53344K562UPF1
chr11770433770479-3'-UTR,intron-Distal,intron-Proximal3.417984.26355K562XRCC6
chr11769946770077-3'-UTR,intron-Distal4.6817747.88703K562UPF1
chr11770343770410-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.1921139.03519K562AKAP1
chr11769327769383-3'-UTR,intron-Distal3.9534714.62368K562AKAP1
chr11770834770882-3'-UTR,intron-Distal,intron-Proximal4.0732411.77596HepG2UPF1
chr11770354770407-3'-UTR,CDS,intron-Distal,intron-Proximal5.6379823.04605HepG2UPF1
chr11771423771498-3'-UTR,CDS,intron-Distal,intron-Proximal4.171313.59236HepG2AQR
chr11770956771011-3'-UTR,CDS,intron-Distal,intron-Proximal3.357367.63733HepG2PPIG
chr11770697770764-3'-UTR,intron-Distal,intron-Proximal5.5817723.35409HepG2AKAP1
chr11770544770596-3'-UTR,intron-Distal,intron-Proximal4.6128317.48702HepG2AKAP1
chr11767688767772-3'-UTR,intron-Distal4.3995829.81147K562AKAP1
chr11770487770535-3'-UTR,intron-Distal,intron-Proximal4.9555028.74103K562UPF1
chr11769905769935-3'-UTR,intron-Distal4.9266910.45182HepG2UPF1
chr11770490770594-3'-UTR,intron-Distal,intron-Proximal4.9396730.47371HepG2UPF1
chr11770173770242-3'-UTR,intron-Distal,intron-Proximal5.0743913.34636HepG2UPF1
chr11769413769478-3'-UTR,intron-Distal5.566249.46220HepG2UPF1
chr11770262770305-3'-UTR,intron-Distal,intron-Proximal4.972456.93811K562NONO
chr11769254769285-3'-UTR,intron-Distal3.527874.41670HepG2AKAP1
chr11770621770682-3'-UTR,intron-Distal,intron-Proximal4.2915014.04531HepG2UPF1
chr11773453773521-3'-UTR,CDS,intron-Distal,intron-Proximal5.300457.81430K562AQR
chr11767780767801-3'-UTR,intron-Distal3.091323.20150HepG2AKAP1
chr11772420772464-3'-UTR,CDS,intron-Distal,intron-Proximal4.3992213.35495HepG2PPIG
chr11769241769293-3'-UTR,intron-Distal3.9389019.20300K562AKAP1
chr11769066769103-3'-UTR,intron-Distal3.6320110.04054K562UPF1
chr11767385767449-3'-UTR,intron-Distal4.066829.34843HepG2SF3A3
chr11771306771370-3'-UTR,CDS,intron-Distal,intron-Proximal3.7653914.59426HepG2PPIG
chr11770764770825-3'-UTR,intron-Distal,intron-Proximal5.3589420.66712HepG2AKAP1
chr11770490770558-3'-UTR,intron-Distal,intron-Proximal4.6074215.86006K562AKAP1
chr11770705770766-3'-UTR,intron-Distal,intron-Proximal4.0133214.60739HepG2UPF1
chr11767331767382-3'-UTR,CDS,intron-Distal4.5713818.08989K562UPF1
chr11768215768262-3'-UTR,intron-Distal4.5134913.23643K562AKAP1
chr11769879769905-3'-UTR,intron-Distal5.643638.87118HepG2UPF1
chr11770487770544-3'-UTR,intron-Distal,intron-Proximal5.5889423.62966HepG2AKAP1
chr11770768770835-3'-UTR,intron-Distal,intron-Proximal3.354966.54857HepG2PPIG
chr11767257767292-3'-UTR,CDS,intron-Distal5.2598316.53238K562UPF1
chr11770188770252-3'-UTR,intron-Distal,intron-Proximal4.8265411.97446HepG2AKAP1
chr11770194770249-3'-UTR,intron-Distal,intron-Proximal3.222955.62315K562NONO
chr11770187770223-3'-UTR,intron-Distal,intron-Proximal5.3973915.43167K562AKAP1
chr11768696768750-3'-UTR,intron-Distal3.565759.87209K562AKAP1
chr11770537770610-3'-UTR,intron-Distal,intron-Proximal4.6565728.10155K562UPF1
chr11767442767520-3'-UTR,intron-Distal4.859276.76894HepG2PABPN1
chr11770352770409-3'-UTR,CDS,intron-Distal,intron-Proximal4.3033321.64768HepG2AKAP1
chr11769961770057-3'-UTR,intron-Distal4.5941624.12365HepG2AKAP1
chr11770211770287-3'-UTR,intron-Distal,intron-Proximal4.7191614.39081K562PUM2
chr11770411770487-3'-UTR,intron-Distal,intron-Proximal5.9391360.66641K562UPF1
chr11767700767761-3'-UTR,intron-Distal3.4100418.18555K562UPF1
chr11771293771348-3'-UTR,CDS,intron-Distal,intron-Proximal3.619067.29769HepG2PRPF8
chr11767386767437-3'-UTR,intron-Distal3.232893.71286HepG2ZC3H11A
chr11770105770135-3'-UTR,intron-Distal,intron-Proximal3.8595111.00079K562AKAP1
chr11769959770040-3'-UTR,intron-Distal3.5688610.74771HepG2UPF1
chr11767808767836-3'-UTR,intron-Distal4.9636212.56575K562UPF1
chr11770312770411-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.19796400.00000K562UPF1
chr11774093774113-5'-UTR,CDS,intron-Distal,intron-Proximal3.162143.50639HepG2PPIG
chr11777398777456-5'-UTR,CDS,intron-Distal4.229233.32488HepG2DDX3X
chr11777393777482-5'-UTR,CDS,intron-Distal,intron-Proximal3.200243.33365K562DDX3X
chr11775063775116-CDS,intron-Distal,intron-Proximal3.372778.34074HepG2PPIG
chr11773522773579-CDS,intron-Distal3.946774.14015K562DDX24
chr11774052774093-CDS,intron-Distal,intron-Proximal3.062483.50639HepG2PPIG
chr11775451775522-intron-Distal4.017054.04290K562CSTF2T
chr11776937777041-intron-Distal3.853127.32634HepG2PRPF4
chr11776937777052-intron-Distal4.4096521.80506HepG2CSTF2T
chr11777122777192-intron-Distal,intron-Proximal3.056383.95743K562AKAP8L
chr11776685776748-intron-Distal3.520633.58549K562NONO
chr11777300777362-intron-Distal3.528884.87202HepG2FAM120A
chr11776391776484-intron-Distal5.244599.30883K562EWSR1
chr11776862776913-intron-Distal3.753703.39593HepG2PRPF4
chr11775456775529-intron-Distal4.907796.90606K562EWSR1
chr11776358776466-intron-Distal5.7214011.70978HepG2FAM120A
chr11775021775057-intron-Distal,intron-Proximal4.874885.69951K562AQR
chr11777117777189-intron-Distal,intron-Proximal5.097478.86792K562CSTF2T
chr11776938777019-intron-Distal3.456893.41847HepG2GTF2F1
chr11776645776764-intron-Distal4.224578.18928K562CSTF2T
chr11774281774322-intron-Distal4.244004.42197K562EWSR1
chr11776352776386-intron-Distal3.585394.92762HepG2CSTF2T
chr11776828776867-intron-Distal3.977547.48189HepG2CSTF2T
chr11776916777024-intron-Distal4.856046.50832HepG2FASTKD2
chr11776948777019-intron-Distal3.922556.93263K562GTF2F1
chr11776674776722-intron-Distal3.974416.99039HepG2CSTF2T
chr11771614771647-intron-Distal3.785726.09862K562NONO
chr11777099777173-intron-Distal4.006663.58513HepG2GTF2F1
chr11776384776459-intron-Distal3.344164.13483HepG2PRPF4
chr11776692776750-intron-Distal3.699025.54974K562EWSR1
chr11773135773195-intron-Distal3.896436.37070K562EWSR1
chr11776867776937-intron-Distal5.5728411.87444HepG2CSTF2T
chr11777111777183-intron-Distal,intron-Proximal4.085057.10319HepG2CSTF2T
chr11777097777142-intron-Distal5.688966.82579K562DROSHA
chr11771238771307-intron-Distal,intron-Proximal5.360597.23718K562AQR
chr11777156777195-intron-Distal,intron-Proximal3.764963.09880K562DROSHA
chr11777112777201-intron-Distal,intron-Proximal5.5334919.37572HepG2FAM120A
chr11777099777202-intron-Distal,intron-Proximal6.2272513.02633K562GTF2F1
chr11777307777354-intron-Distal3.521307.68837HepG2CSTF2T
chr11773256773301-intron-Distal,intron-Proximal3.252163.61506K562NONO
chr11776954777030-intron-Distal3.741255.57638K562CSTF2T
chr11776843776884-intron-Distal4.029603.96304K562CSTF2T
chr11776459776572-intron-Distal3.462684.84286HepG2PRPF4
chr11776946777033-intron-Distal4.071303.93293K562FUS
chr11772521772583-intron-Distal,intron-Proximal3.679919.79280HepG2SF3B4
chr11777119777183-intron-Distal,intron-Proximal4.896436.99055K562EWSR1
chr11773117773198-intron-Distal3.998857.00469K562NONO
chr11773024773052-intron-Distal3.981883.53896K562NONO
chr11776689776727-intron-Distal4.142483.99130HepG2FAM120A
chr11776954777021-intron-Distal3.951477.41671HepG2FAM120A
chr11774481774517-intron-Distal3.965533.28464K562EWSR1
chr11776359776433-intron-Distal4.562025.80843K562CSTF2T
chr11775171775244-intron-Distal,intron-Proximal3.412785.88734K562EWSR1
chr11776953777028-intron-Distal3.896018.05837K562EWSR1
chr11776730776788-intron-Distal5.6176014.35964HepG2CSTF2T
chr11773756773819-intron-Distal5.041198.18518K562EWSR1
chr11777105777195-intron-Distal,intron-Proximal4.364906.86851K562FAM120A
chr11776733776784-intron-Distal3.619584.33898HepG2FAM120A
chr11772530772589-intron-Distal,intron-Proximal3.932706.85082HepG2FAM120A
chr11777107777191-intron-Distal,intron-Proximal4.356935.44815HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PDDC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PDDC1 is not available on ENCORE database.

  • 92 RBPs can affect the levels of PDDC1.  








The Knockdown/knockout RNA-Seq assay for PDDC1 is not available on ENCORE database.





92 RBPs can affect the gene expression of PDDC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PDDC1ENSG00000177225.12741.423501279.36050-0.7871019.1349017.84730HepG2ACO1
PDDC1ENSG00000177225.12727.536101004.01220-0.464703.416302.54540HepG2ASCC1
PDDC1ENSG00000177225.121339.911901664.80100-0.313203.922803.13150HepG2AUH
PDDC1ENSG00000177225.12809.08380488.357900.728302.797602.19640HepG2BOP1
PDDC1ENSG00000177225.12375.54710613.70110-0.708504.771903.79320HepG2CALR
PDDC1ENSG00000177225.12973.095501278.95100-0.394306.063105.14840HepG2CKAP4
PDDC1ENSG00000177225.12520.38940723.78960-0.476003.129902.41140HepG2DDX21
PDDC1ENSG00000177225.12436.38630709.03260-0.700204.511603.33460HepG2DDX24
PDDC1ENSG00000177225.12741.18960487.346800.604804.162402.46820HepG2DDX28
PDDC1ENSG00000177225.12909.11640643.552700.498302.593101.84100HepG2DDX55
PDDC1ENSG00000177225.12897.23160481.329200.8984020.5464018.92190HepG2DNAJC2
PDDC1ENSG00000177225.121463.504601060.657800.464403.288802.59350HepG2EIF4A3
PDDC1ENSG00000177225.121470.112601911.51530-0.378806.068705.23680HepG2ETF1
PDDC1ENSG00000177225.121422.077901070.430500.409703.085602.35460HepG2FXR1
PDDC1ENSG00000177225.12799.55060560.520200.512302.918901.51050HepG2HNRNPA0
PDDC1ENSG00000177225.12805.29000545.324100.562302.295101.65890HepG2HNRNPC
PDDC1ENSG00000177225.12947.96150764.703200.309802.889502.15810HepG2HNRNPF
PDDC1ENSG00000177225.121163.81470903.546800.365105.290904.38420HepG2HNRNPL
PDDC1ENSG00000177225.12852.57630541.718400.6542010.169609.06910HepG2HNRNPU
PDDC1ENSG00000177225.121042.81260753.012900.469604.928903.98850HepG2IGF2BP1
PDDC1ENSG00000177225.121163.68860835.316400.478202.688901.87070HepG2LARP4
PDDC1ENSG00000177225.121756.101601070.805500.713608.088006.97740HepG2MAGOH
PDDC1ENSG00000177225.121356.75320983.614300.463904.302703.35110HepG2NOL12
PDDC1ENSG00000177225.12571.12080372.716400.615603.143801.59890HepG2NOLC1
PDDC1ENSG00000177225.12367.23240605.94590-0.722503.802402.74760HepG2PABPC1
PDDC1ENSG00000177225.121297.93240987.343900.394505.289204.49350HepG2PCBP1
PDDC1ENSG00000177225.12691.51830483.168700.517105.379004.38070HepG2PPIL4
PDDC1ENSG00000177225.121179.646001004.679100.231502.143101.64990HepG2PTBP1
PDDC1ENSG00000177225.121273.47290996.807200.353305.462804.68770HepG2PUM1
PDDC1ENSG00000177225.12925.488701597.65200-0.7877016.9983015.93700HepG2RBM22
PDDC1ENSG00000177225.12940.73130625.669900.588303.810202.55960HepG2RCC2
PDDC1ENSG00000177225.121321.042201041.383300.343104.093903.36270HepG2RECQL
PDDC1ENSG00000177225.12679.45550482.421600.494005.549604.69070HepG2SAFB2
PDDC1ENSG00000177225.12855.68100626.821600.448902.592801.32560HepG2SART3
PDDC1ENSG00000177225.12758.280701141.68900-0.590403.959303.14670HepG2SF3A3
PDDC1ENSG00000177225.121249.52760900.415200.472608.435107.31340HepG2SLBP
PDDC1ENSG00000177225.121112.73540713.434700.641203.961802.79930HepG2SMNDC1
PDDC1ENSG00000177225.121427.081201804.45190-0.338505.277204.64640HepG2SRFBP1
PDDC1ENSG00000177225.12838.447501091.77560-0.380904.266403.71040HepG2SRSF1
PDDC1ENSG00000177225.121038.16940751.300500.466506.225305.24790HepG2SRSF7
PDDC1ENSG00000177225.12680.16740888.23010-0.385004.222503.56780HepG2SRSF9
PDDC1ENSG00000177225.121209.638201054.387400.198102.019001.47120HepG2SUCLG1
PDDC1ENSG00000177225.12407.07150640.57390-0.654105.197104.31600HepG2SUPV3L1
PDDC1ENSG00000177225.12503.18680981.37070-0.9637018.3001017.04040HepG2TAF15
PDDC1ENSG00000177225.12708.50110526.364300.428602.890302.38140HepG2TIAL1
PDDC1ENSG00000177225.12667.61380531.087100.330002.852002.28190HepG2TRIM56
PDDC1ENSG00000177225.121157.97570917.407000.335902.905202.00780HepG2TUFM
PDDC1ENSG00000177225.12428.94620947.42700-1.143205.880604.98120HepG2U2AF1
PDDC1ENSG00000177225.12746.59600378.356900.9805010.575009.09610HepG2UCHL5
PDDC1ENSG00000177225.12781.323101012.50280-0.373904.332203.49090HepG2UPF1
PDDC1ENSG00000177225.12871.76750586.377300.572002.654201.67100HepG2UPF2
PDDC1ENSG00000177225.12972.00520630.576900.624204.524003.60460HepG2XRN2
PDDC1ENSG00000177225.12957.13450818.363900.225901.924501.34940HepG2ZC3H8
PDDC1ENSG00000177225.12826.136101113.56040-0.430706.705405.95100HepG2ZNF622
PDDC1ENSG00000177225.122010.691503189.53480-0.665709.774508.77580K562AQR
PDDC1ENSG00000177225.122001.379801587.079100.334504.010502.37630K562BCCIP
PDDC1ENSG00000177225.122127.464901533.807200.471908.959107.20700K562BCLAF1
PDDC1ENSG00000177225.121523.069801163.621700.388302.731201.68090K562CSTF2
PDDC1ENSG00000177225.123655.168104372.30240-0.258502.664301.70720K562CELF1
PDDC1ENSG00000177225.121629.648302379.24530-0.5459012.2211010.95740K562DDX47
PDDC1ENSG00000177225.121874.156502171.76590-0.212602.074501.43640K562EIF2S2
PDDC1ENSG00000177225.12824.535901338.92840-0.699404.391903.09790K562EIF3A
PDDC1ENSG00000177225.121858.157701502.975100.306002.474301.69870K562EIF4A3
PDDC1ENSG00000177225.12595.532301097.32320-0.881704.888403.31970K562FKBP4
PDDC1ENSG00000177225.12239.90980625.26060-1.3820014.9898013.04420K562G3BP2
PDDC1ENSG00000177225.121863.223801304.359600.514403.081201.57180K562GEMIN5
PDDC1ENSG00000177225.121449.921401127.796300.362402.393801.34450K562HNRNPF
PDDC1ENSG00000177225.121260.222201680.00960-0.414802.511001.74950K562HSPD1
PDDC1ENSG00000177225.121708.198302179.02220-0.351203.488002.55010K562KIF1C
PDDC1ENSG00000177225.12483.24060667.18160-0.465302.458101.58370K562KRR1
PDDC1ENSG00000177225.122064.394901147.145000.8476011.442009.65350K562MAGOH
PDDC1ENSG00000177225.121146.715901710.97850-0.577304.520503.30510K562NAA15
PDDC1ENSG00000177225.121172.033701500.84940-0.356803.613402.18820K562NCBP2
PDDC1ENSG00000177225.121886.336301406.947800.422904.086303.06470K562PPIG
PDDC1ENSG00000177225.12922.144401266.01040-0.457202.164501.49740K562PRPF8
PDDC1ENSG00000177225.121534.919801132.097900.439104.354803.18060K562PSIP1
PDDC1ENSG00000177225.121790.399801114.580400.683709.547108.36710K562PTBP1
PDDC1ENSG00000177225.122586.180503878.70390-0.584808.436507.00350K562PUF60
PDDC1ENSG00000177225.123505.638404126.61700-0.235302.373901.39180K562PUM1
PDDC1ENSG00000177225.121662.834102036.41610-0.292402.038901.55940K562PUS1
PDDC1ENSG00000177225.121618.708701983.95850-0.293503.289602.65170K562RBM15
PDDC1ENSG00000177225.121398.533901033.353200.436504.569103.29280K562RCC2
PDDC1ENSG00000177225.12824.725301289.26400-0.644604.190203.18250K562RPS19
PDDC1ENSG00000177225.121140.706301751.16680-0.618403.048801.38030K562RPS3A
PDDC1ENSG00000177225.121002.94040733.943100.450403.114202.04510K562RPS3
PDDC1ENSG00000177225.12551.50570806.30350-0.547905.386802.96670K562SND1
PDDC1ENSG00000177225.12833.864801474.42570-0.822302.963001.67770K562SNRNP200
PDDC1ENSG00000177225.122691.289202347.364600.197202.656401.73600K562SRPK2
PDDC1ENSG00000177225.121526.135201092.746400.481804.055903.20640K562SRSF1
PDDC1ENSG00000177225.121071.54390708.542000.596706.531904.79410K562SRSF4
PDDC1ENSG00000177225.121338.922701032.229400.375203.029401.92020K562SRSF5
PDDC1ENSG00000177225.12693.29520905.71270-0.385602.981901.64640K562SSB
PDDC1ENSG00000177225.121054.073101764.08070-0.742903.202201.63400K562SUPT6H
PDDC1ENSG00000177225.12392.10300613.78170-0.646502.929201.40890K562TAF15
PDDC1ENSG00000177225.121879.163501105.745400.7650010.830309.27300K562TARDBP
PDDC1ENSG00000177225.121487.476401066.665000.479705.566304.33990K562TIA1
PDDC1ENSG00000177225.121527.023601047.154100.544104.666703.17760K562TRA2A
PDDC1ENSG00000177225.12429.64640606.27620-0.496802.316901.32760K562U2AF1
PDDC1ENSG00000177225.12350.14940626.08740-0.8384010.228008.68300K562U2AF2
PDDC1ENSG00000177225.121902.580102190.65000-0.203402.454501.65490K562WDR43
PDDC1ENSG00000177225.121743.975901321.165500.400502.481501.35620K562XRN2
PDDC1ENSG00000177225.12940.294401735.63520-0.884304.445602.21030K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PDDC1 is not available on ENCORE database.





7 RBPs can affect the splicing of PDDC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPDDC1ENSG00000177225.12chr11-775065775142774007774113777398777483-0.085000.000360.03672excludedK562XRCC6
SEPDDC1ENSG00000177225.12chr11-7715197716887713327714267724267725210.198000.000090.00357includedHepG2HNRNPK
SEPDDC1ENSG00000177225.12chr11-775065775142774007774113777398777471-0.075000.000990.01216excludedK562AQR
SEPDDC1ENSG00000177225.12chr11-775065775142774007774113777398777471-0.081000.007280.09227excludedK562HNRNPC
A3SSPDDC1ENSG00000177225.12chr11-7713327715737713327714267724267725210.173000.000130.01600longerHepG2HNRNPK
A3SSPDDC1ENSG00000177225.12chr11-7709927712127709927711047713327714260.373000.004500.08808longerHepG2U2AF2
A3SSPDDC1ENSG00000177225.12chr11-7709927712127709927711047713327714260.179000.002360.01494longerK562AQR
A3SSPDDC1ENSG00000177225.12chr11-7713327715737713327714267724267725210.110000.000490.00368longerK562AQR
A3SSPDDC1ENSG00000177225.12chr11-7709927712127709927711047713327714260.550000.000000.00000longerHepG2U2AF1
RIPDDC1ENSG00000177225.12chr11-767224770903767224770398770678770903-0.088000.000990.03709excludedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PDDC1 is not avaliable on ENCORE database.