N4BP2L2

General Information

Gene Name       : N4BP2L2
Gene ID             : ENSG00000244754.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: N4BP2L2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878N4BP2L2ENSG00000244754.856.4542.6249.53ENCSR000AEF
HepG2N4BP2L2ENSG00000244754.827.1552.0339.59ENCSR985KAT
K562N4BP2L2ENSG00000244754.829.9938.9834.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for N4BP2L2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • N4BP2L2 RNA is bound by 25 proteins.  







eCLIP assay for N4BP2L2 is not avaliable on ENCORE database.





25 proteins are bound to N4BP2L2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr133309186133091922-3'-UTR,intron-Distal,intron-Proximal3.362505.57639HepG2ZC3H11A
chr133309119933091274-3'-UTR,intron-Distal3.512787.64049K562KHSRP
chr133309105433091117-3'-UTR,intron-Distal4.585953.16986HepG2QKI
chr133309177633091861-3'-UTR,intron-Distal3.044276.60168HepG2ZC3H11A
chr133310161733101696-5'-UTR,CDS,intron-Distal,intron-Proximal3.8296423.30992HepG2U2AF2
chr133311275433112909-5'-UTR,intron-Distal,intron-Proximal4.311449.68900K562DDX3X
chr133309635433096413-CDS,intron-Distal,intron-Proximal4.690535.17144K562U2AF1
chr133310151733101610-CDS,intron-Distal,intron-Proximal3.926343.53067K562SRSF1
chr133309635433096415-CDS,intron-Distal,intron-Proximal3.170906.59925HepG2U2AF1
chr133309207733092142-CDS,intron-Distal,intron-Proximal3.126648.14120HepG2GRWD1
chr133309551733095623-CDS,intron-Distal,intron-Proximal4.0306161.30180HepG2U2AF2
chr133310990233109948-CDS,intron-Distal,intron-Proximal3.124415.81766HepG2EFTUD2
chr133309635333096418-CDS,intron-Distal,intron-Proximal4.246029.23765K562SF3B4
chr133309201433092065-CDS,intron-Distal,intron-Proximal3.3719716.34200HepG2BCLAF1
chr133309207933092134-CDS,intron-Distal,intron-Proximal3.186323.51117HepG2LSM11
chr133310997933110061-CDS,intron-Distal,intron-Proximal3.0960710.90260HepG2BCLAF1
chr133310986733109940-CDS,intron-Distal,intron-Proximal3.9218824.80905HepG2PRPF8
chr133309201533092140-CDS,intron-Distal,intron-Proximal3.386158.75642K562UCHL5
chr133311098633111075-CDS,intron-Distal,intron-Proximal3.637439.93919HepG2BCLAF1
chr133309553533095625-CDS,intron-Distal,intron-Proximal5.6848515.59486K562U2AF2
chr133309635033096415-CDS,intron-Distal,intron-Proximal5.1504819.01757K562U2AF2
chr133311035133110386-CDS,intron-Distal3.212773.32578HepG2SAFB
chr133310989533109942-CDS,intron-Distal,intron-Proximal3.748035.94541K562TIA1
chr133309554533095612-CDS,intron-Distal,intron-Proximal3.436034.35112K562U2AF1
chr133311024033110293-CDS,intron-Distal3.065973.55908K562SAFB
chr133309206533092143-CDS,intron-Distal,intron-Proximal3.8012526.32477HepG2BCLAF1
chr133310989533109954-CDS,intron-Distal,intron-Proximal3.3813615.25977HepG2BCLAF1
chr133309635533096417-CDS,intron-Distal,intron-Proximal5.2013484.43179HepG2U2AF2
chr133308139833081482-intron-Distal3.2093810.81967HepG2SUGP2
chr133311261133112720-intron-Distal,intron-Proximal3.579104.86939K562EFTUD2
chr133308195333082009-intron-Distal3.639244.83120HepG2MATR3
chr133310167933101745-intron-Distal,intron-Proximal3.583756.39618K562KHSRP
chr133310979533109848-intron-Distal,intron-Proximal3.765243.81063HepG2TIA1
chr133308016233080257-intron-Distal3.168164.79538HepG2BCLAF1
chr133308179333081863-intron-Distal4.3754620.21539HepG2SUGP2
chr133308023633080350-intron-Distal4.283795.13243HepG2GRWD1
chr133303028733030364-intron-Distal4.075737.95181HepG2SUGP2
chr133308098833081064-intron-Distal4.0535413.80303HepG2SUGP2
chr133308086433080914-intron-Distal3.628419.54287HepG2SUGP2
chr133309791433097976-intron-Distal3.8475313.61050HepG2HNRNPK
chr133308796633088014-intron-Distal3.394104.83226HepG2HNRNPM
chr133303102233031097-intron-Distal3.770023.16028HepG2SUGP2
chr133308182833081931-intron-Distal3.092365.21050HepG2MATR3
chr133309031433090360-intron-Distal3.114093.31830K562KHSRP
chr133309040933090444-intron-Distal4.653726.34785K562KHSRP
chr133308086033080920-intron-Distal3.053616.31188HepG2U2AF2
chr133308587133085931-intron-Distal3.470284.95320HepG2U2AF2
chr133308795533088057-intron-Distal3.304204.81136K562KHSRP
chr133310977433109842-intron-Distal,intron-Proximal3.165137.64824K562TIA1
chr133303008233030124-intron-Distal3.914773.16028HepG2SUGP2
chr133308256233082606-intron-Distal3.657837.91745HepG2SUGP2
chr133308125033081285-intron-Distal4.881965.01910HepG2MATR3
chr133308106433081145-intron-Distal3.9725114.93141HepG2SUGP2
chr133308247833082526-intron-Distal3.071356.35394HepG2SUGP2
chr133310047533100569-intron-Distal3.6245835.11030HepG2QKI
chr133303027933030340-intron-Distal4.304703.29197K562HNRNPM
chr133309758633097651-intron-Distal3.539815.97326HepG2HNRNPC
chr133309052733090551-intron-Distal3.253096.26770K562KHSRP
chr133307833533078414-intron-Distal3.511454.98044HepG2CSTF2
chr133303007733030134-intron-Distal3.458653.90822HepG2HNRNPM
chr133310652133106590-intron-Distal3.921473.39089K562KHDRBS1
chr133308933133089406-intron-Distal3.236923.25288HepG2HNRNPC
chr133309646633096562-intron-Distal,intron-Proximal3.066103.55116K562KHSRP
chr133302965833029727-intron-Distal3.427414.14346HepG2SUGP2
chr133310051833100589-intron-Distal3.2616016.20468HepG2HNRNPL
chr133308200933082119-intron-Distal4.065128.32287HepG2MATR3
chr133308186333081946-intron-Distal3.7618319.55919HepG2SUGP2
chr133308820733088274-intron-Distal4.044283.71397K562KHSRP
chr133308153633081634-intron-Distal4.5354719.57734HepG2SUGP2
chr133310184733101919-intron-Distal3.065055.03031K562KHSRP
chr133308211933082198-intron-Distal4.459256.29761HepG2MATR3
chr133310979733109851-intron-Distal,intron-Proximal3.388296.88025HepG2KHSRP
chr133307593133075982-intron-Distal3.939003.15106HepG2HNRNPC
chr133303029333030373-intron-Distal3.309763.59351HepG2MATR3
chr133308210333082154-intron-Distal3.9202110.98367HepG2SUGP2
chr133309286333092956-intron-Distal3.614918.43681HepG2HNRNPL
chr133308148233081536-intron-Distal3.738939.00162HepG2SUGP2
chr133309043133090489-intron-Distal4.895765.07255HepG2KHSRP
chr133310512733105180-intron-Distal4.995655.02084HepG2HNRNPM
chr133308140233081465-intron-Distal4.133073.41738HepG2PTBP1
chr133310422833104338-intron-Distal4.7214412.89363K562KHSRP
chr133309522833095278-intron-Distal4.3238910.75955HepG2U2AF2
chr133308092733081037-intron-Distal4.032543.92684K562KHSRP
chr133310518033105234-intron-Distal4.3414812.02410HepG2HNRNPM
chr133302994533030002-intron-Distal3.527714.14896HepG2HNRNPM
chr133309047233090501-intron-Distal5.6954515.63479K562KHSRP
chr133303026233030350-intron-Distal4.6063711.18312HepG2HNRNPM
chr133309765133097662-intron-Distal3.040173.98577HepG2HNRNPC
chr133308811033088177-intron-Distal3.912775.83959K562KHSRP
chr133309044433090472-intron-Distal5.6673515.80204K562KHSRP
chr133309050133090527-intron-Distal4.030286.89837K562KHSRP
chr133308187233081977-intron-Distal4.571995.32928K562MATR3
chr133308166633081726-intron-Distal3.230677.13214HepG2SUGP2
chr133308123733081291-intron-Distal4.1947313.41910HepG2SUGP2
chr133302193533022004-intron-Distal3.796253.04224HepG2SUGP2
chr133308194933081992-intron-Distal3.522847.44522HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for N4BP2L2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for N4BP2L2 is not available on ENCORE database.

  • 82 RBPs can affect the levels of N4BP2L2.  








The Knockdown/knockout RNA-Seq assay for N4BP2L2 is not available on ENCORE database.





82 RBPs can affect the gene expression of N4BP2L2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
N4BP2L2ENSG00000244754.41775.874901358.947200.385903.534902.33170HepG2AATF
N4BP2L2ENSG00000244754.41552.289202127.41920-0.454703.285002.71220HepG2AKAP1
N4BP2L2ENSG00000244754.41412.384001061.155500.412403.301502.32050HepG2BCLAF1
N4BP2L2ENSG00000244754.42255.886901773.952600.346603.902603.00960HepG2CALR
N4BP2L2ENSG00000244754.42178.758901618.502300.428704.159103.33230HepG2CPSF6
N4BP2L2ENSG00000244754.41119.048201397.33650-0.320403.451202.31470HepG2YBX3
N4BP2L2ENSG00000244754.41748.939402254.38850-0.366305.690604.83150HepG2CELF1
N4BP2L2ENSG00000244754.41588.444601892.91840-0.253003.478602.55630HepG2DDX19B
N4BP2L2ENSG00000244754.41171.38780909.680100.364702.900501.47430HepG2DDX28
N4BP2L2ENSG00000244754.41600.132102037.98480-0.349002.472901.87830HepG2DDX3X
N4BP2L2ENSG00000244754.43094.062201837.930100.751303.233202.17860HepG2DDX59
N4BP2L2ENSG00000244754.41803.411801323.378400.446404.151602.96420HepG2DHX30
N4BP2L2ENSG00000244754.41709.848901359.957600.330205.432004.56440HepG2DNAJC2
N4BP2L2ENSG00000244754.41181.593501566.00560-0.406403.120402.14590HepG2EEF2
N4BP2L2ENSG00000244754.42525.807401682.968300.585606.322705.44540HepG2EIF2S1
N4BP2L2ENSG00000244754.42391.861101810.769500.401402.351901.71490HepG2EIF4B
N4BP2L2ENSG00000244754.44611.106902889.186400.6743018.0309016.71730HepG2ETF1
N4BP2L2ENSG00000244754.41665.754702000.08270-0.263902.150101.41450HepG2EWSR1
N4BP2L2ENSG00000244754.41392.24310999.350400.478204.103502.58120HepG2FKBP4
N4BP2L2ENSG00000244754.41951.015501035.018400.9145017.9094016.00140HepG2FUBP3
N4BP2L2ENSG00000244754.42517.442001740.740200.532205.045504.15950HepG2G3BP1
N4BP2L2ENSG00000244754.42532.994301847.835200.454904.329403.20390HepG2G3BP2
N4BP2L2ENSG00000244754.4812.835001131.95490-0.477803.887702.81200HepG2GEMIN5
N4BP2L2ENSG00000244754.41250.451501540.81470-0.301202.274101.63970HepG2HNRNPC
N4BP2L2ENSG00000244754.41785.606501522.816300.229602.451001.77360HepG2HNRNPF
N4BP2L2ENSG00000244754.42712.548501750.873300.631507.986406.97800HepG2HNRNPLL
N4BP2L2ENSG00000244754.41130.817201530.62830-0.436807.018906.08910HepG2HNRNPU
N4BP2L2ENSG00000244754.41800.898201499.542300.264102.300901.63880HepG2IGF2BP1
N4BP2L2ENSG00000244754.41172.552001656.75580-0.498703.325802.08210HepG2LARP7
N4BP2L2ENSG00000244754.41309.933501887.56340-0.527004.385303.60750HepG2MATR3
N4BP2L2ENSG00000244754.42656.239901785.696600.572802.189001.33410HepG2MTPAP
N4BP2L2ENSG00000244754.42000.178302403.89690-0.265202.167601.49100HepG2NOL12
N4BP2L2ENSG00000244754.42367.920901552.495200.608907.895006.67640HepG2NSUN2
N4BP2L2ENSG00000244754.4840.270701051.32990-0.323302.663101.45780HepG2PKM
N4BP2L2ENSG00000244754.41876.063301476.068900.345804.801803.81390HepG2PRPF4
N4BP2L2ENSG00000244754.41141.93220926.418000.301602.079201.37460HepG2PRPF8
N4BP2L2ENSG00000244754.41485.620502294.65810-0.627205.448604.64770HepG2PUF60
N4BP2L2ENSG00000244754.41964.784802435.79680-0.310006.372505.55020HepG2PUM1
N4BP2L2ENSG00000244754.41754.775002434.06990-0.472107.254506.18510HepG2PUM2
N4BP2L2ENSG00000244754.43255.321001821.230800.8378023.0661021.51940HepG2QKI
N4BP2L2ENSG00000244754.42856.970301652.927300.789409.493808.30050HepG2RBM25
N4BP2L2ENSG00000244754.41319.896301997.70310-0.597904.015902.80670HepG2RBM27
N4BP2L2ENSG00000244754.42190.126201743.174900.329204.980704.18380HepG2RECQL
N4BP2L2ENSG00000244754.42096.707801640.402200.354002.944002.24250HepG2RPLP0
N4BP2L2ENSG00000244754.4888.540701236.98460-0.477304.918504.12560HepG2RPS19
N4BP2L2ENSG00000244754.41266.13240916.447000.466203.706802.81420HepG2RRP9
N4BP2L2ENSG00000244754.41568.091002530.95480-0.690706.660805.58580HepG2SF3A3
N4BP2L2ENSG00000244754.42130.752101750.792300.283303.770503.09680HepG2SF3B4
N4BP2L2ENSG00000244754.41303.393601589.60680-0.286404.201803.43880HepG2SMN1
N4BP2L2ENSG00000244754.43708.458802727.471400.4432011.6215010.78510HepG2SRFBP1
N4BP2L2ENSG00000244754.42071.533901827.487400.180701.906801.49350HepG2SRSF1
N4BP2L2ENSG00000244754.42548.979201864.749700.450803.221402.13210HepG2SRSF3
N4BP2L2ENSG00000244754.42033.266201486.792200.451509.219408.31620HepG2SRSF9
N4BP2L2ENSG00000244754.42895.284002368.107000.289904.779404.14210HepG2SSB
N4BP2L2ENSG00000244754.42018.899802576.62930-0.351907.199306.27620HepG2SUCLG1
N4BP2L2ENSG00000244754.41726.070601195.221000.530104.890904.03050HepG2SUPV3L1
N4BP2L2ENSG00000244754.42618.345101642.726100.6725014.2909013.16270HepG2TAF15
N4BP2L2ENSG00000244754.42208.562901706.599900.371903.366802.57620HepG2TARDBP
N4BP2L2ENSG00000244754.42495.909401509.325700.725604.805203.71310HepG2TIA1
N4BP2L2ENSG00000244754.41622.560702241.64640-0.466306.247904.85660HepG2TUFM
N4BP2L2ENSG00000244754.41100.63180706.109900.640306.787005.58470HepG2UCHL5
N4BP2L2ENSG00000244754.41939.545802244.56770-0.210702.508701.83820HepG2UPF1
N4BP2L2ENSG00000244754.41429.867102167.04540-0.5998014.5829013.36990HepG2UTP3
N4BP2L2ENSG00000244754.42280.749901456.711900.6467019.7097018.20660HepG2ZC3H8
N4BP2L2ENSG00000244754.41847.566102213.21520-0.260503.258802.65230K562AGGF1
N4BP2L2ENSG00000244754.41770.429002302.93950-0.379403.715302.95520K562AKAP8L
N4BP2L2ENSG00000244754.41997.013602416.31670-0.275003.073902.10920K562ATP5C1
N4BP2L2ENSG00000244754.42061.446202644.95010-0.359604.328902.81500K562CCDC124
N4BP2L2ENSG00000244754.41478.793601912.90060-0.371304.805003.31880K562CPEB4
N4BP2L2ENSG00000244754.4817.313801105.72900-0.436004.313902.97060K562DDX3X
N4BP2L2ENSG00000244754.41658.591601979.27620-0.255002.858302.19650K562DDX47
N4BP2L2ENSG00000244754.42140.252202478.19830-0.211502.187401.41930K562DKC1
N4BP2L2ENSG00000244754.4894.991101199.79820-0.422804.062803.10810K562EIF3G
N4BP2L2ENSG00000244754.4908.159501201.36980-0.403704.736403.97370K562FXR1
N4BP2L2ENSG00000244754.42071.501201355.622000.611605.074704.05020K562G3BP2
N4BP2L2ENSG00000244754.4834.079701056.38660-0.340902.559001.98230K562HNRNPC
N4BP2L2ENSG00000244754.41189.397101510.83170-0.345102.928401.69550K562IGF2BP3
N4BP2L2ENSG00000244754.4754.740401022.83180-0.438503.724702.05780K562LARP7
N4BP2L2ENSG00000244754.4724.44120947.14790-0.386702.783601.87650K562PSIP1
N4BP2L2ENSG00000244754.41116.345801516.78950-0.442205.040204.16710K562PTBP1
N4BP2L2ENSG00000244754.42364.436902862.17770-0.275603.030701.91010K562PUM1
N4BP2L2ENSG00000244754.41868.905602225.31270-0.251802.489501.92210K562RBM15
N4BP2L2ENSG00000244754.41187.988301454.53950-0.292002.114801.38480K562RBM22
N4BP2L2ENSG00000244754.4658.38240864.08560-0.392203.030101.98940K562RCC2
N4BP2L2ENSG00000244754.41108.853201530.64220-0.465104.269402.87580K562NELFE
N4BP2L2ENSG00000244754.41216.009901486.93490-0.290202.378901.71550K562SRSF1
N4BP2L2ENSG00000244754.41008.226401347.61820-0.418602.589001.57740K562SRSF4
N4BP2L2ENSG00000244754.41683.999401332.828300.337303.219802.28020K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for N4BP2L2 is not available on ENCORE database.





16 RBPs can affect the splicing of N4BP2L2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEN4BP2L2ENSG00000244754.4chr13-331127543311282133110563331111643311291433112962-0.102000.000150.00430excludedK562SRSF1
SEN4BP2L2ENSG00000244754.4chr13-331099053311116433101544331016693311275433112970-0.094000.000050.00620excludedHepG2RBM22
SEN4BP2L2ENSG00000244754.4chr13-330963183309640733092011330921403310154433101669-0.163000.000190.00833excludedK562AKAP8L
SEN4BP2L2ENSG00000244754.4chr13-330955093309558633091993330921403310154433101669-0.181000.000000.00011excludedHepG2U2AF2
SEN4BP2L2ENSG00000244754.4chr13-330955093309558633091993330921403310990533111164-0.120000.000000.00004excludedK562AQR
SEN4BP2L2ENSG00000244754.4chr13-330955093309558633091993330921403310990533111164-0.147000.000000.00000excludedK562PUS1
SEN4BP2L2ENSG00000244754.4chr13-3305472633054774330181023301826333091993330920570.438000.000830.09966includedHepG2HNRNPA1
SEN4BP2L2ENSG00000244754.4chr13-3305472633054774330181023301826333091993330920570.284000.000010.00267includedHepG2LARP4
SEN4BP2L2ENSG00000244754.4chr13-330955093309558633091993330921403310154433101669-0.148000.000190.00819excludedHepG2SF3A3
SEN4BP2L2ENSG00000244754.4chr13-331099053311116433101544331016693311275433112970-0.074000.001070.03233excludedHepG2SF3A3
SEN4BP2L2ENSG00000244754.4chr13-330955093309558633091993330921403310990533111164-0.126000.000000.00037excludedK562UTP18
SEN4BP2L2ENSG00000244754.4chr13-330955093309558633091993330921403310990533111164-0.165000.000000.00000excludedK562RBM15
SEN4BP2L2ENSG00000244754.4chr13-330963183309640733092011330921403310154433101669-0.114000.003680.07384excludedK562AGGF1
SEN4BP2L2ENSG00000244754.4chr13-331127543311282133110563331111643311291433112962-0.107000.000070.00516excludedK562HNRNPK
A3SSN4BP2L2ENSG00000244754.4chr13-3301652433018263330165243301668533091993330921400.452000.000180.00150longerK562AQR
A3SSN4BP2L2ENSG00000244754.4chr13-3309550933095683330955093309558633096318330964070.133000.000060.00051longerK562AQR
A3SSN4BP2L2ENSG00000244754.4chr13-3301652433018263330165243301668533091993330921400.280000.001840.07761longerK562PUS1
A3SSN4BP2L2ENSG00000244754.4chr13-3301652433018263330165243301668533091993330921400.330000.000130.04888longerHepG2TBRG4
A5SSN4BP2L2ENSG00000244754.4chr13-331127543311282133112819331128213311106933111164-0.182000.000110.01611shorterHepG2SRSF9
MXEN4BP2L2ENSG00000244754.4chr13-3310159433101669331110693311116433096318330964073311275433112821-0.095000.000080.012082includedHepG2RBM22
MXEN4BP2L2ENSG00000244754.4chr13-33096318330964073310154433101669330955093309558633109905331111640.125000.007920.074181includedK562DROSHA

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for N4BP2L2 is not avaliable on ENCORE database.